RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 PNLIPP16233 465 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 ETFBP38117 255 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 CORO7P57737 925 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 RTP1P59025 263 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 LAPTM5Q13571 262 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 NAALADL2Q58DX5 795 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 NBPF6Q5VWK0 638 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 MPZL3Q6UWV2 235 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 ADAT2Q7Z6V5 191 aaKnown RBP5.32□□□□□ -1.56
VRK1-202ENST00000553683 SLCO6A1Q86UG4 719 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 FAM178BQ8IXR5 827 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 NLGN2Q8NFZ4 835 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 SHISA4Q96DD7 197 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 NBPF4Q96M43 638 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 FCRL3Q96P31 734 aaPredicted RBP5.32□□□□□ -1.56
VRK1-202ENST00000553683 CDADC1Q9BWV3 514 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 NOL6Q9H6R4 1146 aaKnown RBP5.32□□□□□ -1.56
VRK1-202ENST00000553683 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.32□□□□□ -1.56
VRK1-202ENST00000553683 CGGBP1Q9UFW8 167 aaPredicted RBP5.32□□□□□ -1.56
VRK1-202ENST00000553683 MINPP1Q9UNW1 487 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 MRVI1Q9Y6F6 885 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 MEIS1O00470 390 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 AURKAO14965 403 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 PEX10O60683 326 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 FKTNO75072 461 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 TBC1D8O95759 1140 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 CEP128Q6ZU80 1094 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 BVESQ8NE79 360 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 LIN37Q96GY3 246 aaPredicted RBP5.31□□□□□ -1.56
VRK1-202ENST00000553683 PPP1R16BQ96T49 567 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 RNF32Q9H0A6 362 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 GOLGA2P5Q9HBQ8 144 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 AP5S1Q9NUS5 200 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 ACSL6Q9UKU0 697 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 EMC9Q9Y3B6 208 aa5.31□□□□□ -1.56
VRK1-202ENST00000553683 R3HCC1Q9Y3T6 440 aaKnown RBP5.31□□□□□ -1.56
VRK1-202ENST00000553683 NOP56O00567 594 aaKnown RBP5.3□□□□□ -1.56
VRK1-202ENST00000553683 ABLIM1O14639 778 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 KLF4O43474 513 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 PSPNO60542 156 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 GSTM1P09488 218 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 CEBPAP49715 358 aaPredicted RBP5.3□□□□□ -1.56
VRK1-202ENST00000553683 AMPD2Q01433 879 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 MESP2Q0VG99 397 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 HSF5Q4G112 596 aaPredicted RBP5.3□□□□□ -1.56
VRK1-202ENST00000553683 NAT16Q8N8M0 369 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 FBXO15Q8NCQ5 510 aaPredicted RBP5.3□□□□□ -1.56
VRK1-202ENST00000553683 TMEM52Q8NDY8 209 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 ZNF669Q96BR6 464 aaPredicted RBP5.3□□□□□ -1.56
VRK1-202ENST00000553683 INTS4Q96HW7 963 aaKnown RBP5.3□□□□□ -1.56
VRK1-202ENST00000553683 CCDC140Q96MF4 163 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 PTCHD1Q96NR3 888 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 SLC26A8Q96RN1 970 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 C19orf44Q9H6X5 657 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 GPR160Q9UJ42 338 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 SUGT1Q9Y2Z0 365 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 TAF6LQ9Y6J9 622 aa5.3□□□□□ -1.56
VRK1-202ENST00000553683 USP2O75604 605 aaPredicted RBP5.29□□□□□ -1.56
VRK1-202ENST00000553683 TRHRP34981 398 aaPredicted RBP5.29□□□□□ -1.56
VRK1-202ENST00000553683 ARL4AP40617 200 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 ERVFRD-1P60508 538 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 TMEM62Q0P6H9 643 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 MLANAQ16655 118 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 TIGD5Q53EQ6 642 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 OLFML2BQ68BL8 750 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 C6orf15Q6UXA7 325 aaPredicted RBP5.29□□□□□ -1.56
VRK1-202ENST00000553683 EEPD1Q7L9B9 569 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 FGD4Q96M96 766 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 ZDHHC15Q96MV8 337 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 SLC38A3Q99624 504 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 EPB41L4BQ9H329 900 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 ZNF552Q9H707 407 aaPredicted RBP5.29□□□□□ -1.56
VRK1-202ENST00000553683 CYP26B1Q9NR63 512 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 FAM86C1Q9NVL1 165 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 AKT3Q9Y243 479 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 GPR55Q9Y2T6 319 aaPredicted RBP5.29□□□□□ -1.56
VRK1-202ENST00000553683 BACE2Q9Y5Z0 518 aa5.29□□□□□ -1.56
VRK1-202ENST00000553683 OR14I1A6ND48 311 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 SUSD5O60279 629 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 DDAH1O94760 285 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 CD3EP07766 207 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 YBX3P16989 372 aaKnown RBP eCLIP5.28□□□□□ -1.56
VRK1-202ENST00000553683 RAB33AQ14088 237 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 PPP2R5DQ14738 602 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 LARP1BQ659C4 914 aaKnown RBP5.28□□□□□ -1.56
VRK1-202ENST00000553683 ZPBP2Q6X784 338 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 PRR23BQ6ZRT6 265 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 ANKS3Q6ZW76 656 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 KSR1Q8IVT5 923 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 TRIM59Q8IWR1 403 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 CKAP2LQ8IYA6 745 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 ADCY4Q8NFM4 1077 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 COPS5Q92905 334 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 MRGPRX3Q96LB0 322 aa5.28□□□□□ -1.56
VRK1-202ENST00000553683 DCP1AQ9NPI6 582 aaPredicted RBP5.28□□□□□ -1.56
VRK1-202ENST00000553683 C2orf71A6NGG8 1288 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 AGRPO00253 132 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 SEMA7AO75326 666 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 STK10O94804 968 aaKnown RBP5.27□□□□□ -1.57
VRK1-202ENST00000553683 TSPAN15O95858 294 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms