RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 SHISA4Q96DD7 197 aa16.27■□□□□ 0.2
LETMD1-229ENST00000551261 RANBP17Q9H2T7 1088 aaKnown RBP16.27■□□□□ 0.2
LETMD1-229ENST00000551261 TFIP11Q9UBB9 837 aaKnown RBP16.27■□□□□ 0.2
LETMD1-229ENST00000551261 PRR12Q9ULL5 1215 aa16.27■□□□□ 0.2
LETMD1-229ENST00000551261 OTOFQ9HC10 1997 aa16.27■□□□□ 0.19
LETMD1-229ENST00000551261 PHIPQ8WWQ0 1821 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 LETM1O95202 739 aaPredicted RBP16.26■□□□□ 0.19
LETMD1-229ENST00000551261 SLC16A2P36021 539 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 ME1P48163 572 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 NONOQ15233 471 aaKnown RBP eCLIP16.26■□□□□ 0.19
LETMD1-229ENST00000551261 EAPPQ56P03 285 aaPredicted RBP16.26■□□□□ 0.19
LETMD1-229ENST00000551261 SH3D19Q5HYK7 790 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 TYW1BQ6NUM6 668 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 LDHDQ86WU2 507 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 SPICE1Q8N0Z3 855 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 SAMD3Q8N6K7 520 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 OXER1Q8TDS5 423 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 SLF1Q9BQI6 1058 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 CPVLQ9H3G5 476 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 TMOD4Q9NZQ9 345 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 SCAF8Q9UPN6 1271 aaKnown RBP16.26■□□□□ 0.19
LETMD1-229ENST00000551261 PCDHA1Q9Y5I3 950 aa16.26■□□□□ 0.19
LETMD1-229ENST00000551261 ABCB11O95342 1321 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 POTECB2RU33 542 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 FOSP01100 380 aaPredicted RBP16.25■□□□□ 0.19
LETMD1-229ENST00000551261 VCAM1P19320 739 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 PPATQ06203 517 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 MTMR2Q13614 643 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 VGLL4Q14135 290 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 PTPAQ15257 358 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 CCDC73Q6ZRK6 1079 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 GPT2Q8TD30 523 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 ZKSCAN4Q969J2 545 aaPredicted RBP16.25■□□□□ 0.19
LETMD1-229ENST00000551261 FERMT2Q96AC1 680 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 CHAMP1Q96JM3 812 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 DDX19AQ9NUU7 478 aaKnown RBP16.25■□□□□ 0.19
LETMD1-229ENST00000551261 PCDHA6Q9UN73 950 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 PCDHA8Q9Y5H6 950 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 SNCAIPQ9Y6H5 919 aa16.25■□□□□ 0.19
LETMD1-229ENST00000551261 BAZ2BQ9UIF8 2168 aaKnown RBP16.24■□□□□ 0.19
LETMD1-229ENST00000551261 POLR2AP24928 1970 aaKnown RBP16.24■□□□□ 0.19
LETMD1-229ENST00000551261 LOC285556D6RIA3 1793 aa16.24■□□□□ 0.19
LETMD1-229ENST00000551261 CUTAO60888 179 aa16.24■□□□□ 0.19
LETMD1-229ENST00000551261 OAZ1P54368 228 aa16.24■□□□□ 0.19
LETMD1-229ENST00000551261 SPP2Q13103 211 aa16.24■□□□□ 0.19
LETMD1-229ENST00000551261 ARL6IP4Q66PJ3 421 aaKnown RBP16.24■□□□□ 0.19
LETMD1-229ENST00000551261 PIK3AP1Q6ZUJ8 805 aa16.24■□□□□ 0.19
LETMD1-229ENST00000551261 ERO1BQ86YB8 467 aa16.24■□□□□ 0.19
LETMD1-229ENST00000551261 KRI1Q8N9T8 703 aaKnown RBP16.24■□□□□ 0.19
LETMD1-229ENST00000551261 ZNF579Q8NAF0 562 aaKnown RBP16.24■□□□□ 0.19
LETMD1-229ENST00000551261 NUP88Q99567 741 aaPredicted RBP16.24■□□□□ 0.19
LETMD1-229ENST00000551261 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
LETMD1-229ENST00000551261 AFG3L2Q9Y4W6 797 aa16.24■□□□□ 0.19
LETMD1-229ENST00000551261 CLIC4Q9Y696 253 aa16.24■□□□□ 0.19
LETMD1-229ENST00000551261 ZHX2Q9Y6X8 837 aa16.24■□□□□ 0.19
LETMD1-229ENST00000551261 SPDYE5A6NIY4 337 aa16.23■□□□□ 0.19
LETMD1-229ENST00000551261 PIK3CDO00329 1044 aa16.23■□□□□ 0.19
LETMD1-229ENST00000551261 CXCL11O14625 94 aa16.23■□□□□ 0.19
LETMD1-229ENST00000551261 PPP1R11O60927 126 aaPredicted RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 GCFC2P16383 781 aaKnown RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 CLK2P49760 499 aaKnown RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 TOB1P50616 345 aaPredicted RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 CEBPZQ03701 1054 aaKnown RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 ZYXQ15942 572 aaKnown RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 CCDC183Q5T5S1 534 aa16.23■□□□□ 0.19
LETMD1-229ENST00000551261 PRAMEF18Q5VWM3 479 aa16.23■□□□□ 0.19
LETMD1-229ENST00000551261 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 PROCA1Q8NCQ7 364 aaPredicted RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 MRPS27Q92552 414 aaKnown RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 GLIS2Q9BZE0 524 aaPredicted RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 EMILIN3Q9NT22 766 aa16.23■□□□□ 0.19
LETMD1-229ENST00000551261 MAP3K20Q9NYL2 800 aaKnown RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 PPP1R9AQ9ULJ8 1098 aa16.23■□□□□ 0.19
LETMD1-229ENST00000551261 MRPL11Q9Y3B7 192 aaKnown RBP16.23■□□□□ 0.19
LETMD1-229ENST00000551261 GADD45BO75293 160 aaPredicted RBP16.22■□□□□ 0.19
LETMD1-229ENST00000551261 ICAM1P05362 532 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 CMA1P23946 247 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 ATP2C1P98194 919 aaPredicted RBP16.22■□□□□ 0.19
LETMD1-229ENST00000551261 FAM160A1Q05DH4 1040 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 KIAA1755Q5JYT7 1200 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 NEK8Q86SG6 692 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 KIFC2Q96AC6 838 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 COA7Q96BR5 231 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 PYM1Q9BRP8 204 aaKnown RBP16.22■□□□□ 0.19
LETMD1-229ENST00000551261 TANGO6Q9C0B7 1094 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 EHMT1Q9H9B1 1298 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 PCDHA7Q9UN72 937 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 CLEC11AQ9Y240 323 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 RABGAP1Q9Y3P9 1069 aa16.22■□□□□ 0.19
LETMD1-229ENST00000551261 CTDP1Q9Y5B0 961 aaPredicted RBP16.22■□□□□ 0.19
LETMD1-229ENST00000551261 ZBED4O75132 1171 aa16.21■□□□□ 0.19
LETMD1-229ENST00000551261 PTPREP23469 700 aa16.21■□□□□ 0.19
LETMD1-229ENST00000551261 PRPHP41219 470 aa16.21■□□□□ 0.19
LETMD1-229ENST00000551261 GHRHRQ02643 423 aa16.21■□□□□ 0.19
LETMD1-229ENST00000551261 PPIL2Q13356 520 aa16.21■□□□□ 0.19
LETMD1-229ENST00000551261 CAVIN1Q6NZI2 390 aaKnown RBP16.21■□□□□ 0.19
LETMD1-229ENST00000551261 MOXD1Q6UVY6 613 aa16.21■□□□□ 0.19
LETMD1-229ENST00000551261 PGBD1Q96JS3 809 aa16.21■□□□□ 0.19
LETMD1-229ENST00000551261 FTOQ9C0B1 505 aaKnown RBP eCLIP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms