RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 TAL1P17542 331 aaPredicted RBP11.88□□□□□ -0.51
RAB5C-207ENST00000550504 OSBPP22059 807 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 HOXA7P31268 230 aaPredicted RBP11.88□□□□□ -0.51
RAB5C-207ENST00000550504 GUCY1B3Q02153 619 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 USH1GQ495M9 461 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 ANKRD23Q86SG2 305 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 FAM43AQ8N2R8 423 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 COA7Q96BR5 231 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 C8orf76Q96K31 380 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 ZIC5Q96T25 663 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 P2RX7Q99572 595 aaKnown RBP11.88□□□□□ -0.51
RAB5C-207ENST00000550504 PTPN18Q99952 460 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 RANBP17Q9H2T7 1088 aaKnown RBP11.88□□□□□ -0.51
RAB5C-207ENST00000550504 VPS54Q9P1Q0 977 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 PARP14Q460N5 1801 aa11.88□□□□□ -0.51
RAB5C-207ENST00000550504 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-207ENST00000550504 VPS37CA5D8V6 355 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-207ENST00000550504 H3BQV1 296 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 VWA5AO00534 786 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 AOC2O75106 756 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
RAB5C-207ENST00000550504 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
RAB5C-207ENST00000550504 CYP2C8P10632 490 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 SYT1P21579 422 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 NAPAP54920 295 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 KIF23Q02241 960 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-207ENST00000550504 TRIM29Q14134 588 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 FOXD4L5Q5VV16 416 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-207ENST00000550504 FBXO11Q86XK2 927 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 TNS4Q8IZW8 715 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 CPXCR1Q8N123 301 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 FOXD4L4Q8WXT5 416 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-207ENST00000550504 SHISA4Q96DD7 197 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 CAPNS2Q96L46 248 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 AMNQ9BXJ7 453 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 SLC38A10Q9HBR0 1119 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 RAVER2Q9HCJ3 691 aaKnown RBP11.87□□□□□ -0.51
RAB5C-207ENST00000550504 HOXC10Q9NYD6 342 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 PNMA3Q9UL41 463 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 KCNJ14Q9UNX9 436 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 RLFQ13129 1914 aa11.87□□□□□ -0.51
RAB5C-207ENST00000550504 MYPNQ86TC9 1320 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 STXBP3O00186 592 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 IGF2BP3O00425 579 aaKnown RBP eCLIP11.86□□□□□ -0.51
RAB5C-207ENST00000550504 PEX10O60683 326 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 XBP1P17861 261 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 PDCP20941 246 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 HERVK_113P62684 666 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 SREBF2Q12772 1141 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 PKP1Q13835 747 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 PLS1Q14651 629 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 KRT40Q6A162 431 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 TYW1BQ6NUM6 668 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 AGBL1Q96MI9 1066 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 PAGR1Q9BTK6 254 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 BARHL2Q9NY43 387 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 CCPG1Q9ULG6 757 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 PCDHA1Q9Y5I3 950 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 ZNF536O15090 1300 aa11.86□□□□□ -0.51
RAB5C-207ENST00000550504 STX6O43752 255 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 ICAM1P05362 532 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 DDIT3P35638 169 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 NLRP5P59047 1200 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 NOGQ13253 232 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 TMEM132BQ14DG7 1078 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 POTEEQ6S8J3 1075 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 IFNL1Q8IU54 200 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 REPS2Q8NFH8 660 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 FBXO18Q8NFZ0 1043 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 SMCR8Q8TEV9 937 aaPredicted RBP11.85□□□□□ -0.51
RAB5C-207ENST00000550504 HOMER2Q9NSB8 354 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 BTBD7Q9P203 1132 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 ADAMTS5Q9UNA0 930 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 SLC45A1Q9Y2W3 748 aa11.85□□□□□ -0.51
RAB5C-207ENST00000550504 COL11A1P12107 1806 aaPredicted RBP11.85□□□□□ -0.51
RAB5C-207ENST00000550504 WDR33Q9C0J8 1336 aaKnown RBP11.85□□□□□ -0.51
RAB5C-207ENST00000550504 SMCO2A6NFE2 343 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 hCG_1984214I3L0E3 225 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 FDX1P10109 184 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 ALAS1P13196 640 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 VEGFBP49765 207 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 INHBEP58166 350 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 MCTP1Q6DN14 999 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 SNRNP48Q6IEG0 339 aaKnown RBP11.84□□□□□ -0.51
RAB5C-207ENST00000550504 LBX2Q6XYB7 198 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 ZNF713Q8N859 430 aaPredicted RBP11.84□□□□□ -0.51
RAB5C-207ENST00000550504 CCDC148Q8NFR7 591 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 PARK7Q99497 189 aaKnown RBP11.84□□□□□ -0.51
RAB5C-207ENST00000550504 PHF20Q9BVI0 1012 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 SH3GLB2Q9NR46 395 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 MTMR6Q9Y217 621 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 ABCB11O95342 1321 aa11.84□□□□□ -0.51
RAB5C-207ENST00000550504 A0A0G2JMZ2 1700 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 CNMDO75829 334 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 MMP1P03956 469 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 TM4SF4P48230 202 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 OAZ1P54368 228 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 TRAF1Q13077 416 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 GNL2Q13823 731 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms