RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CD46P15529 392 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 SLC35G1Q2M3R5 365 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 C16orf71Q8IYS4 520 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-212ENST00000549162 LRRN4Q8WUT4 740 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 ESR2Q92731 530 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 ANP32EQ9BTT0 268 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 KANSL2Q9H9L4 492 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 PDLIM7Q9NR12 457 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 FBXL5Q9UKA1 691 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 KIF3AQ9Y496 699 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 CYP46A1Q9Y6A2 500 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 FAM155AB1AL88 458 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-212ENST00000549162 SEC24BO95487 1268 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 FOSP01100 380 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-212ENST00000549162 EIF2S2P20042 333 aaKnown RBP5.68□□□□□ -1.5
SCAF11-212ENST00000549162 ANXA13P27216 316 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 ZNF543Q08ER8 600 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 PPP2R5CQ13362 524 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 LDHDQ86WU2 507 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 LCORLQ8N3X6 602 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 IGSF22Q8N9C0 903 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 RHOBTB2Q9BYZ6 727 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 MTMR6Q9Y217 621 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 MMP1P03956 469 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 SREBF1P36956 1147 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 FOSBP53539 338 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 CLDN10P78369 228 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 DPP8Q6V1X1 898 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-212ENST00000549162 SLC17A8Q8NDX2 589 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 PKNOX2Q96KN3 472 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 CXorf51AA0A1B0GTR3 108 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 STXBP3O00186 592 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 CNMDO75829 334 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 CAP2P40123 477 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 ATP2C1P98194 919 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-212ENST00000549162 CRTC2Q53ET0 693 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-212ENST00000549162 SCYL3Q8IZE3 742 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 LNPKQ9C0E8 428 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 HDAC9Q9UKV0 1011 aa5.68□□□□□ -1.5
SCAF11-212ENST00000549162 ZNF131P52739 623 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 ARMC3Q5W041 872 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 USP17L2Q6R6M4 530 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 SLC43A3Q8NBI5 491 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 CHST13Q8NET6 341 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 FERMT2Q96AC1 680 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 ZNF341Q9BYN7 854 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 DBR1Q9UK59 544 aaKnown RBP5.67□□□□□ -1.5
SCAF11-212ENST00000549162 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.67□□□□□ -1.5
SCAF11-212ENST00000549162 IQCA1LA6NCM1 817 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 ATP5J2-PTCD1G3V325 749 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 CTAGE5O15320 804 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 PTCD1O75127 700 aaKnown RBP5.67□□□□□ -1.5
SCAF11-212ENST00000549162 STAU1O95793 577 aaKnown RBP5.67□□□□□ -1.5
SCAF11-212ENST00000549162 EFEMP2O95967 443 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 CALML3P27482 149 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 SPIRE1Q08AE8 756 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 KLHL40Q2TBA0 621 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 GPAT2Q6NUI2 795 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 CYB5R4Q7L1T6 521 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 LIMS2Q7Z4I7 341 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 TXNRD3Q86VQ6 643 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 ENAHQ8N8S7 591 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-212ENST00000549162 FBXO18Q8NFZ0 1043 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 KLRG1Q96E93 195 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 ACSBG1Q96GR2 724 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 POLR3CQ9BUI4 534 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-212ENST00000549162 MROH7Q68CQ1 1323 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 TNNI2P48788 182 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 PDE4BQ07343 736 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 DCAF15Q66K64 600 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 CIAPIN1Q6FI81 312 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 KCNV1Q6PIU1 500 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 NUTM1Q86Y26 1132 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 BICD2Q8TD16 824 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 TMX3Q96JJ7 454 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 PHF12Q96QT6 1004 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 STYXL1Q9Y6J8 313 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 TLL2Q9Y6L7 1015 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 DDX11L8A8MPP1 907 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 TRIM6-TRIM34B2RNG4 842 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 TTLL1O95922 423 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 ZKSCAN1P17029 563 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-212ENST00000549162 GSCP56915 257 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-212ENST00000549162 FAM26DQ5JW98 314 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 RESP18Q5W5W9 173 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 RIOX2Q8IUF8 465 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 FRAT1Q92837 279 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-212ENST00000549162 PDLIM2Q96JY6 352 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 MYOZ2Q9NPC6 264 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 NENFQ9UMX5 172 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 RBM19Q9Y4C8 960 aaKnown RBP5.67□□□□□ -1.5
SCAF11-212ENST00000549162 UBIAD1Q9Y5Z9 338 aa5.67□□□□□ -1.5
SCAF11-212ENST00000549162 LRRC10BA6NIK2 292 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 NKRFO15226 690 aaKnown RBP eCLIP5.66□□□□□ -1.5
SCAF11-212ENST00000549162 XRCC5P13010 732 aaKnown RBP5.66□□□□□ -1.5
SCAF11-212ENST00000549162 SETQ01105 290 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-212ENST00000549162 PIK3R5Q8WYR1 880 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 SLC5A5Q92911 643 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 FAM227BQ96M60 508 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 SLC38A10Q9HBR0 1119 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms