RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 ADAMTS4O75173 837 aa18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 FLOT1O75955 427 aa18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 ZNF865P0CJ78 1059 aaPredicted RBP18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 EEF2P13639 858 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 TAL1P17542 331 aaPredicted RBP18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 FAAP100Q0VG06 881 aa18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 PLS1Q14651 629 aa18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 NEDD1Q8NHV4 660 aa18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 TINF2Q9BSI4 451 aa18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 IL25Q9H293 177 aa18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 SH2D4AQ9H788 454 aa18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 DIS3Q9Y2L1 958 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-206ENST00000549139 IGKV6D-41A0A0C4DH26 115 aa18.58■□□□□ 0.56
CHMP1A-206ENST00000549139 ORC4O43929 436 aa18.58■□□□□ 0.56
CHMP1A-206ENST00000549139 SLC25A27O95847 323 aa18.58■□□□□ 0.56
CHMP1A-206ENST00000549139 ZNF792Q3KQV3 632 aa18.58■□□□□ 0.56
CHMP1A-206ENST00000549139 TMEM39AQ9NV64 488 aa18.58■□□□□ 0.56
CHMP1A-206ENST00000549139 NYAP2Q9P242 653 aa18.58■□□□□ 0.56
CHMP1A-206ENST00000549139 CHD7Q9P2D1 2997 aa18.58■□□□□ 0.56
CHMP1A-206ENST00000549139 PLIN4Q96Q06 1357 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 ZNF213O14771 459 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 SGSM2O43147 1006 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 PGK2P07205 417 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 TSPY3P0CV98 308 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 TSPY8P0CW00 308 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 PCP11498 1178 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 TFAP4Q01664 338 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 CLEC10AQ8IUN9 316 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 SPICE1Q8N0Z3 855 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 LENG1Q96BZ8 264 aaPredicted RBP18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 TIFAQ96CG3 184 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.57■□□□□ 0.562e-7■□□□□ 11.2
CHMP1A-206ENST00000549139 TSEN34Q9BSV6 310 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 VCPKMTQ9H867 229 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 INCENPQ9NQS7 918 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 CTNNA3Q9UI47 895 aa18.57■□□□□ 0.56
CHMP1A-206ENST00000549139 TIMP1P01033 207 aa18.56■□□□□ 0.56
CHMP1A-206ENST00000549139 AKNAD1Q5T1N1 836 aa18.56■□□□□ 0.56
CHMP1A-206ENST00000549139 RASIP1Q5U651 963 aa18.56■□□□□ 0.56
CHMP1A-206ENST00000549139 CCSAPQ6IQ19 270 aaPredicted RBP18.56■□□□□ 0.56
CHMP1A-206ENST00000549139 C16orf59Q7L2K0 433 aa18.56■□□□□ 0.56
CHMP1A-206ENST00000549139 RIOX2Q8IUF8 465 aa18.56■□□□□ 0.56
CHMP1A-206ENST00000549139 MKL1Q969V6 931 aa18.56■□□□□ 0.56
CHMP1A-206ENST00000549139 MMP19Q99542 508 aa18.56■□□□□ 0.56
CHMP1A-206ENST00000549139 TBX21Q9UL17 535 aa18.56■□□□□ 0.56
CHMP1A-206ENST00000549139 TSPY2A6NKD2 308 aa18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 WDR46O15213 610 aaKnown RBP18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 AKR1A1P14550 325 aa18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 ACLYP53396 1101 aa18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 HAND2P61296 217 aa18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 PPP4R3BQ5MIZ7 849 aa18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 MFSD6Q6ZSS7 791 aa18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 KLHDC9Q8NEP7 349 aa18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 STAG1Q8WVM7 1258 aa18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 CEP95Q96GE4 821 aa18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 RNF41Q9H4P4 317 aaPredicted RBP18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 MTMR4Q9NYA4 1195 aa18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 RAPGEFL1Q9UHV5 662 aa18.55■□□□□ 0.56
CHMP1A-206ENST00000549139 RANBP6O60518 1105 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-206ENST00000549139 NT5C2P49902 561 aa18.54■□□□□ 0.56
CHMP1A-206ENST00000549139 IMMTQ16891 758 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-206ENST00000549139 REPS2Q8NFH8 660 aa18.54■□□□□ 0.56
CHMP1A-206ENST00000549139 ATXN2LQ8WWM7 1075 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-206ENST00000549139 PBX4Q9BYU1 374 aa18.54■□□□□ 0.56
CHMP1A-206ENST00000549139 GOPCQ9HD26 462 aa18.54■□□□□ 0.56
CHMP1A-206ENST00000549139 STARD7Q9NQZ5 370 aa18.54■□□□□ 0.56
CHMP1A-206ENST00000549139 FBXO28Q9NVF7 368 aa18.54■□□□□ 0.56
CHMP1A-206ENST00000549139 CLIP2Q9UDT6 1046 aa18.54■□□□□ 0.56
CHMP1A-206ENST00000549139 SYNPO2Q9UMS6 1093 aa18.54■□□□□ 0.56
CHMP1A-206ENST00000549139 SYNRGQ9UMZ2 1314 aa18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 MOXD2PA6NHM9 499 aa18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 GRXCR1A8MXD5 290 aa18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 DCDC2CA8MYV0 355 aa18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 TTLL1O95922 423 aa18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 PBX2P40425 430 aa18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 STAT3P40763 770 aa18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 PTH1RQ03431 593 aa18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 TMEM240Q5SV17 173 aa18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 MFSD5Q6N075 450 aa18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 TOMM22Q9NS69 142 aa18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 ZNF214Q9UL59 606 aaPredicted RBP18.53■□□□□ 0.56
CHMP1A-206ENST00000549139 VWA5AO00534 786 aa18.52■□□□□ 0.56
CHMP1A-206ENST00000549139 CDK7P50613 346 aa18.52■□□□□ 0.56
CHMP1A-206ENST00000549139 KCTD2Q14681 263 aa18.52■□□□□ 0.56
CHMP1A-206ENST00000549139 KCNA10Q16322 511 aa18.52■□□□□ 0.56
CHMP1A-206ENST00000549139 TBC1D10CQ8IV04 446 aa18.52■□□□□ 0.56
CHMP1A-206ENST00000549139 NUP133Q8WUM0 1156 aa18.52■□□□□ 0.56
CHMP1A-206ENST00000549139 MAP4K1Q92918 833 aa18.52■□□□□ 0.56
CHMP1A-206ENST00000549139 ASB2Q96Q27 587 aa18.52■□□□□ 0.56
CHMP1A-206ENST00000549139 PRDM12Q9H4Q4 367 aa18.52■□□□□ 0.56
CHMP1A-206ENST00000549139 IL17RBQ9NRM6 502 aa18.52■□□□□ 0.56
CHMP1A-206ENST00000549139 TCP11L1Q9NUJ3 509 aa18.52■□□□□ 0.56
CHMP1A-206ENST00000549139 MYADML2A6NDP7 307 aa18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 F5H6K3 240 aa18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 SNAI1O95863 264 aaPredicted RBP18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 NOVP48745 357 aa18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 KLRC3Q07444 240 aa18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 ADGRE1Q14246 886 aa18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 RRP12Q5JTH9 1297 aaKnown RBP18.51■□□□□ 0.55
CHMP1A-206ENST00000549139 SAMD1Q6SPF0 538 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms