RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 KRT83P78385 493 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 KIF4BQ2VIQ3 1234 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 ZNF569Q5MCW4 686 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 SLF2Q8IX21 1173 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 CPLX3Q8WVH0 158 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 TFCP2L1Q9NZI6 479 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 CAPN11Q9UMQ6 739 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 TBC1D8O95759 1140 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 USP17L8P0C7I0 530 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 MCM3P25205 808 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 TM4SF1P30408 202 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 UBXN1Q04323 297 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 GRAPQ13588 217 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 GRAPLQ8TC17 118 aaPredicted RBP16.41■□□□□ 0.22
LETMD1-209ENST00000547318 RPGRIP1Q96KN7 1286 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 VPS16Q9H269 839 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 C6orf50Q9HD87 102 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 TAB2Q9NYJ8 693 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 ZHX1Q9UKY1 873 aaPredicted RBP16.41■□□□□ 0.22
LETMD1-209ENST00000547318 LUC7L2Q9Y383 392 aaKnown RBP16.41■□□□□ 0.22
LETMD1-209ENST00000547318 MYH1P12882 1939 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 FAM205AQ6ZU69 1335 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 KCNQ2O43526 872 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 NAALADL2Q58DX5 795 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 FIGNQ5HY92 759 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 FOXR2Q6PJQ5 311 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 BICDL1Q6ZP65 573 aa16.41■□□□□ 0.22
LETMD1-209ENST00000547318 RTCBQ9Y3I0 505 aaKnown RBP16.41■□□□□ 0.22
LETMD1-209ENST00000547318 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 WTIPA6NIX2 430 aaPredicted RBP16.4■□□□□ 0.22
LETMD1-209ENST00000547318 KLRC4O43908 158 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 OR52Z1P0C646 297 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 ERVK-24P63145 666 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 NONOQ15233 471 aaKnown RBP eCLIP16.4■□□□□ 0.22
LETMD1-209ENST00000547318 CCDC170Q8IYT3 715 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 ZNF507Q8TCN5 953 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 C7orf25Q9BPX7 421 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 EPN1Q9Y6I3 576 aaPredicted RBP16.4■□□□□ 0.22
LETMD1-209ENST00000547318 ABCB11O95342 1321 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 BTAF1O14981 1849 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 CTAGE15A4D2H0 777 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 NDUFA10O95299 355 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 CTAGE8P0CG41 777 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 CCNE1P24864 410 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 CYLC1P35663 651 aaPredicted RBP16.4■□□□□ 0.22
LETMD1-209ENST00000547318 CDK17Q00537 523 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 MEA1Q16626 185 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 CTAGE6Q86UF2 777 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 CTAGE4Q8IX94 777 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 STAMQ92783 540 aa16.4■□□□□ 0.22
LETMD1-209ENST00000547318 ZNHIT6Q9NWK9 470 aaKnown RBP16.4■□□□□ 0.22
LETMD1-209ENST00000547318 A0A1W2PQJ5 194 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 PSMD14O00487 310 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 EIF3JO75822 258 aaKnown RBP16.39■□□□□ 0.21
LETMD1-209ENST00000547318 SRGNP10124 158 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 CYP2C19P33261 490 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 ARHGAP25P42331 645 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 NOVP48745 357 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 VPS72Q15906 364 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 TTI2Q6NXR4 508 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 C16orf86Q6ZW13 317 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 HEATR3Q7Z4Q2 680 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 CABP7Q86V35 215 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 SLC35F6Q8N357 371 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 NEDD1Q8NHV4 660 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 GPKOWQ92917 476 aaPredicted RBP eCLIP16.39■□□□□ 0.21
LETMD1-209ENST00000547318 TRIM47Q96LD4 638 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 FUT8Q9BYC5 575 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 LRRC27Q9C0I9 530 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 GDAQ9Y2T3 454 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 LY75O60449 1722 aa16.39■□□□□ 0.21
LETMD1-209ENST00000547318 MAP2K7O14733 419 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
LETMD1-209ENST00000547318 RASA1P20936 1047 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 LONRF2Q1L5Z9 754 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 CNNM4Q6P4Q7 775 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 HDXQ7Z353 690 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 IRF2BP1Q8IU81 584 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 STAG2Q8N3U4 1231 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
LETMD1-209ENST00000547318 RRP36Q96EU6 259 aaKnown RBP16.38■□□□□ 0.21
LETMD1-209ENST00000547318 FAM163AQ96GL9 167 aaPredicted RBP16.38■□□□□ 0.21
LETMD1-209ENST00000547318 TMEM47Q9BQJ4 181 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 ACBD3Q9H3P7 528 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 EXOC1Q9NV70 894 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 CALCOCO1Q9P1Z2 691 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 STK17AQ9UEE5 414 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 SEC63Q9UGP8 760 aaKnown RBP16.38■□□□□ 0.21
LETMD1-209ENST00000547318 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 IPO7O95373 1038 aaKnown RBP16.38■□□□□ 0.21
LETMD1-209ENST00000547318 MYH8P13535 1937 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 FLT1P17948 1338 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 SMC1AQ14683 1233 aaKnown RBP16.38■□□□□ 0.21
LETMD1-209ENST00000547318 INF2Q27J81 1249 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 SOGA3Q5TF21 947 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 NEK8Q86SG6 692 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 P2RX5Q93086 422 aa16.38■□□□□ 0.21
LETMD1-209ENST00000547318 PSD3Q9NYI0 1048 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms