RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 COL13A1Q5TAT6 717 aaPredicted RBP26.91■■□□□ 1.9
SMARCD1-203ENST00000547247 CMTR1Q8N1G2 835 aaKnown RBP26.91■■□□□ 1.9
SMARCD1-203ENST00000547247 SRBD1Q8N5C6 995 aaKnown RBP26.91■■□□□ 1.9
SMARCD1-203ENST00000547247 SLKQ9H2G2 1235 aaPredicted RBP26.91■■□□□ 1.9
SMARCD1-203ENST00000547247 RAVER2Q9HCJ3 691 aaKnown RBP26.91■■□□□ 1.9
SMARCD1-203ENST00000547247 LIMCH1Q9UPQ0 1083 aa26.91■■□□□ 1.9
SMARCD1-203ENST00000547247 CYTH3O43739 400 aa26.9■■□□□ 1.9
SMARCD1-203ENST00000547247 SLC35G1Q2M3R5 365 aa26.9■■□□□ 1.9
SMARCD1-203ENST00000547247 CCDC174Q6PII3 467 aa26.9■■□□□ 1.9
SMARCD1-203ENST00000547247 ZNF296Q8WUU4 475 aaPredicted RBP26.9■■□□□ 1.9
SMARCD1-203ENST00000547247 TEX13BQ9BXU2 312 aa26.9■■□□□ 1.9
SMARCD1-203ENST00000547247 CDC37Q16543 378 aaPredicted RBP26.89■■□□□ 1.9
SMARCD1-203ENST00000547247 CCAR1Q8IX12 1150 aaKnown RBP26.89■■□□□ 1.9
SMARCD1-203ENST00000547247 CCDC82Q8N4S0 544 aa26.89■■□□□ 1.9
SMARCD1-203ENST00000547247 MOV10L1Q9BXT6 1211 aaKnown RBP26.89■■□□□ 1.9
SMARCD1-203ENST00000547247 NCOA5Q9HCD5 579 aaKnown RBP26.89■■□□□ 1.9
SMARCD1-203ENST00000547247 PFKFB2O60825 505 aa26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 LACTBP83111 547 aaPredicted RBP26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 ME3Q16798 604 aa26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 SNRNP48Q6IEG0 339 aaKnown RBP26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 RIOX2Q8IUF8 465 aa26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 MTMR8Q96EF0 704 aa26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 ZNF536O15090 1300 aa26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 ICAM1P05362 532 aa26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 KIF22Q14807 665 aa26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 HOMER1Q86YM7 354 aa26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 PIGSQ96S52 555 aa26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 PNMA2Q9UL42 364 aa26.88■■□□□ 1.89
SMARCD1-203ENST00000547247 BAZ2BQ9UIF8 2168 aaKnown RBP26.87■■□□□ 1.89
SMARCD1-203ENST00000547247 ZBTB5O15062 677 aa26.87■■□□□ 1.89
SMARCD1-203ENST00000547247 SLC25A27O95847 323 aa26.87■■□□□ 1.89
SMARCD1-203ENST00000547247 QRICH1Q2TAL8 776 aa26.87■■□□□ 1.89
SMARCD1-203ENST00000547247 RRP36Q96EU6 259 aaKnown RBP26.87■■□□□ 1.89
SMARCD1-203ENST00000547247 ZSCAN31Q96LW9 406 aaPredicted RBP26.87■■□□□ 1.89
SMARCD1-203ENST00000547247 AGBL1Q96MI9 1066 aa26.87■■□□□ 1.89
SMARCD1-203ENST00000547247 PORCNQ9H237 461 aa26.87■■□□□ 1.89
SMARCD1-203ENST00000547247 CPLX1O14810 134 aa26.86■■□□□ 1.89
SMARCD1-203ENST00000547247 LARGE1O95461 756 aa26.86■■□□□ 1.89
SMARCD1-203ENST00000547247 COPB2P35606 906 aa26.86■■□□□ 1.89
SMARCD1-203ENST00000547247 SLC4A3P48751 1232 aa26.86■■□□□ 1.89
SMARCD1-203ENST00000547247 MCM2P49736 904 aa26.86■■□□□ 1.89
SMARCD1-203ENST00000547247 FUT2Q10981 343 aa26.86■■□□□ 1.89
SMARCD1-203ENST00000547247 SCRN1Q12765 414 aa26.86■■□□□ 1.89
SMARCD1-203ENST00000547247 SHCBP1Q8NEM2 672 aa26.86■■□□□ 1.89
SMARCD1-203ENST00000547247 ERO1AQ96HE7 468 aa26.86■■□□□ 1.89
SMARCD1-203ENST00000547247 CCPG1Q9ULG6 757 aa26.86■■□□□ 1.89
SMARCD1-203ENST00000547247 PNMA6FA0A0J9YX94 578 aa26.85■■□□□ 1.89
SMARCD1-203ENST00000547247 MAPK4P31152 587 aa26.85■■□□□ 1.89
SMARCD1-203ENST00000547247 CPLX2Q6PUV4 134 aaKnown RBP26.85■■□□□ 1.89
SMARCD1-203ENST00000547247 NCAPG2Q86XI2 1143 aa26.85■■□□□ 1.89
SMARCD1-203ENST00000547247 PIBF1Q8WXW3 757 aa26.85■■□□□ 1.89
SMARCD1-203ENST00000547247 EFCC1Q9HA90 598 aa26.85■■□□□ 1.89
SMARCD1-203ENST00000547247 CNTNAP5Q8WYK1 1306 aa26.85■■□□□ 1.89
SMARCD1-203ENST00000547247 ECM2O94769 699 aaPredicted RBP26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 ERCC3P19447 782 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 NTRK3Q16288 839 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 FBXO11Q86XK2 927 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 CD99L2Q8TCZ2 262 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 MROH8Q9H579 483 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 SEC63Q9UGP8 760 aaKnown RBP26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 RIPK3Q9Y572 518 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 CD2BP2O95400 341 aaKnown RBP26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 ALAS1P13196 640 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 IFNAR1P17181 557 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 PSMC4P43686 418 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 FCGRTP55899 365 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 TKFCQ3LXA3 575 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 WDR78Q5VTH9 848 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 NECAB1Q8N987 351 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 GTF3C6Q969F1 213 aa26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 CWC22Q9HCG8 908 aaKnown RBP26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 SH2B1Q9NRF2 756 aaPredicted RBP26.84■■□□□ 1.89
SMARCD1-203ENST00000547247 ARHGEF6Q15052 776 aa26.83■■□□□ 1.89
SMARCD1-203ENST00000547247 AMNQ9BXJ7 453 aa26.83■■□□□ 1.89
SMARCD1-203ENST00000547247 FMNL1O95466 1100 aaPredicted RBP26.82■■□□□ 1.88
SMARCD1-203ENST00000547247 TRAF1Q13077 416 aa26.82■■□□□ 1.88
SMARCD1-203ENST00000547247 USH1GQ495M9 461 aa26.82■■□□□ 1.88
SMARCD1-203ENST00000547247 CHST13Q8NET6 341 aa26.82■■□□□ 1.88
SMARCD1-203ENST00000547247 ARHGAP39Q9C0H5 1083 aa26.82■■□□□ 1.88
SMARCD1-203ENST00000547247 HOMER2Q9NSB8 354 aa26.82■■□□□ 1.88
SMARCD1-203ENST00000547247 V9GY48 417 aaPredicted RBP26.82■■□□□ 1.88
SMARCD1-203ENST00000547247 TNPO2O14787 897 aaKnown RBP26.81■■□□□ 1.88
SMARCD1-203ENST00000547247 CTGFP29279 349 aa26.81■■□□□ 1.88
SMARCD1-203ENST00000547247 GPR142Q7Z601 462 aa26.81■■□□□ 1.88
SMARCD1-203ENST00000547247 PHKBQ93100 1093 aa26.81■■□□□ 1.88
SMARCD1-203ENST00000547247 TRIM47Q96LD4 638 aa26.81■■□□□ 1.88
SMARCD1-203ENST00000547247 TRERF1Q96PN7 1200 aa26.81■■□□□ 1.88
SMARCD1-203ENST00000547247 FBXO40Q9UH90 709 aa26.81■■□□□ 1.88
SMARCD1-203ENST00000547247 MYH6P13533 1939 aa26.81■■□□□ 1.88
SMARCD1-203ENST00000547247 hCG_1642624A0A1W2PR95 340 aa26.8■■□□□ 1.88
SMARCD1-203ENST00000547247 PPP1R11O60927 126 aaPredicted RBP26.8■■□□□ 1.88
SMARCD1-203ENST00000547247 CDKL5O76039 1030 aa26.8■■□□□ 1.88
SMARCD1-203ENST00000547247 AKAP17AQ02040 695 aaKnown RBP26.8■■□□□ 1.88
SMARCD1-203ENST00000547247 PLEKHH3Q7Z736 793 aa26.8■■□□□ 1.88
SMARCD1-203ENST00000547247 COA7Q96BR5 231 aa26.8■■□□□ 1.88
SMARCD1-203ENST00000547247 RNF26Q9BY78 433 aaPredicted RBP26.8■■□□□ 1.88
SMARCD1-203ENST00000547247 RNF146Q9NTX7 359 aa26.8■■□□□ 1.88
SMARCD1-203ENST00000547247 RBM27Q9P2N5 1060 aaKnown RBP26.8■■□□□ 1.88
SMARCD1-203ENST00000547247 IVNS1ABPQ9Y6Y0 642 aa26.8■■□□□ 1.88
SMARCD1-203ENST00000547247 TAL1P17542 331 aaPredicted RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms