RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 RNF111Q6ZNA4 994 aa8.92□□□□□ -0.98
NPAS3-204ENST00000546849 NAT16Q8N8M0 369 aa8.92□□□□□ -0.98
NPAS3-204ENST00000546849 FOXP3Q9BZS1 431 aa8.92□□□□□ -0.98
NPAS3-204ENST00000546849 SLC5A6Q9Y289 635 aa8.92□□□□□ -0.98
NPAS3-204ENST00000546849 STXBP3O00186 592 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 GSTM1P09488 218 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 FAM153BP0C7A2 387 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 CANXP27824 592 aaKnown RBP8.91□□□□□ -0.98
NPAS3-204ENST00000546849 SSTR4P31391 388 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 SEPHS1P49903 392 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 TMEM67Q5HYA8 995 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 ANGEL2Q5VTE6 544 aaKnown RBP8.91□□□□□ -0.98
NPAS3-204ENST00000546849 ZNF513Q8N8E2 541 aaPredicted RBP8.91□□□□□ -0.98
NPAS3-204ENST00000546849 MRGPRX3Q96LB0 322 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 CCDC140Q96MF4 163 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 CDADC1Q9BWV3 514 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 SLKQ9H2G2 1235 aaPredicted RBP8.91□□□□□ -0.98
NPAS3-204ENST00000546849 SEMA3GQ9NS98 782 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 FANCLQ9NW38 375 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 PCDHA11Q9Y5I1 949 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 BACE2Q9Y5Z0 518 aa8.91□□□□□ -0.98
NPAS3-204ENST00000546849 ESYT3A0FGR9 886 aa8.9□□□□□ -0.98
NPAS3-204ENST00000546849 WASH4PA8MWX3 477 aa8.9□□□□□ -0.98
NPAS3-204ENST00000546849 PRODHO43272 600 aa8.9□□□□□ -0.98
NPAS3-204ENST00000546849 CTSKP43235 329 aa8.9□□□□□ -0.98
NPAS3-204ENST00000546849 MSMPQ1L6U9 139 aa8.9□□□□□ -0.98
NPAS3-204ENST00000546849 NSMFQ6X4W1 530 aa8.9□□□□□ -0.98
NPAS3-204ENST00000546849 VSIG10LQ86VR7 867 aa8.9□□□□□ -0.98
NPAS3-204ENST00000546849 IER2Q9BTL4 223 aa8.9□□□□□ -0.98
NPAS3-204ENST00000546849 ARHGEF4Q9NR80 690 aa8.9□□□□□ -0.98
NPAS3-204ENST00000546849 TRBV23-1A0A0A0MS06 115 aa8.89□□□□□ -0.99
NPAS3-204ENST00000546849 TBX1O43435 398 aa8.89□□□□□ -0.99
NPAS3-204ENST00000546849 APPP05067 770 aa8.89□□□□□ -0.99
NPAS3-204ENST00000546849 RPL10P27635 214 aaKnown RBP8.89□□□□□ -0.99
NPAS3-204ENST00000546849 HOXC12P31275 282 aa8.89□□□□□ -0.99
NPAS3-204ENST00000546849 ECI1P42126 302 aa8.89□□□□□ -0.99
NPAS3-204ENST00000546849 LINC00116Q8NCU8 138 aa8.89□□□□□ -0.99
NPAS3-204ENST00000546849 FLCNQ8NFG4 579 aa8.89□□□□□ -0.99
NPAS3-204ENST00000546849 KCTD13Q8WZ19 329 aa8.89□□□□□ -0.99
NPAS3-204ENST00000546849 NKX2-4Q9H2Z4 354 aa8.89□□□□□ -0.99
NPAS3-204ENST00000546849 CCDC163A0A0D9SF12 145 aa8.88□□□□□ -0.99
NPAS3-204ENST00000546849 CPP00450 1065 aa8.88□□□□□ -0.99
NPAS3-204ENST00000546849 FGFR1P11362 822 aa8.88□□□□□ -0.99
NPAS3-204ENST00000546849 PABPC1P11940 636 aaKnown RBP8.88□□□□□ -0.99
NPAS3-204ENST00000546849 VAV1P15498 845 aa8.88□□□□□ -0.99
NPAS3-204ENST00000546849 SUMO1P63165 101 aaKnown RBP8.88□□□□□ -0.99
NPAS3-204ENST00000546849 SCRN1Q12765 414 aa8.88□□□□□ -0.99
NPAS3-204ENST00000546849 GAB4Q2WGN9 574 aa8.88□□□□□ -0.99
NPAS3-204ENST00000546849 WAPLQ7Z5K2 1190 aa8.88□□□□□ -0.99
NPAS3-204ENST00000546849 SCUBE1Q8IWY4 988 aa8.88□□□□□ -0.99
NPAS3-204ENST00000546849 CARS2Q9HA77 564 aaKnown RBP8.88□□□□□ -0.99
NPAS3-204ENST00000546849 C2orf71A6NGG8 1288 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 ADCY3O60266 1144 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 ZNF205O95201 554 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 HSD3B2P26439 372 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 BNIP3Q12983 259 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 NLGN1Q8N2Q7 840 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 USHBP1Q8N6Y0 703 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 KRTAP4-12Q9BQ66 201 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 DHRS4Q9BTZ2 278 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 CYP26B1Q9NR63 512 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 PCMTD2Q9NV79 361 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 TMEM260Q9NX78 707 aa8.87□□□□□ -0.99
NPAS3-204ENST00000546849 ENPP3O14638 875 aa8.86□□□□□ -0.99
NPAS3-204ENST00000546849 AURKAO14965 403 aa8.86□□□□□ -0.99
NPAS3-204ENST00000546849 IFNGR1P15260 489 aa8.86□□□□□ -0.99
NPAS3-204ENST00000546849 L1CAMP32004 1257 aa8.86□□□□□ -0.99
NPAS3-204ENST00000546849 ZP2Q05996 745 aa8.86□□□□□ -0.99
NPAS3-204ENST00000546849 TCEA2Q15560 299 aa8.86□□□□□ -0.99
NPAS3-204ENST00000546849 YOD1Q5VVQ6 348 aaPredicted RBP8.86□□□□□ -0.99
NPAS3-204ENST00000546849 EEF1DP3Q658K8 133 aa8.86□□□□□ -0.99
NPAS3-204ENST00000546849 C16orf86Q6ZW13 317 aa8.86□□□□□ -0.99
NPAS3-204ENST00000546849 FAM177A1Q8N128 213 aaPredicted RBP8.86□□□□□ -0.99
NPAS3-204ENST00000546849 BCL7CQ8WUZ0 217 aaPredicted RBP8.86□□□□□ -0.99
NPAS3-204ENST00000546849 SLC12A9Q9BXP2 914 aa8.86□□□□□ -0.99
NPAS3-204ENST00000546849 KANSL2Q9H9L4 492 aa8.86□□□□□ -0.99
NPAS3-204ENST00000546849 ASMTLO95671 621 aa8.85□□□□□ -0.99
NPAS3-204ENST00000546849 ESR1P03372 595 aa8.85□□□□□ -0.99
NPAS3-204ENST00000546849 CD96P40200 585 aa8.85□□□□□ -0.99
NPAS3-204ENST00000546849 GRIA2P42262 883 aa8.85□□□□□ -0.99
NPAS3-204ENST00000546849 GFRA1P56159 465 aa8.85□□□□□ -0.99
NPAS3-204ENST00000546849 MAP4K2Q12851 820 aa8.85□□□□□ -0.99
NPAS3-204ENST00000546849 SQSTM1Q13501 440 aa8.85□□□□□ -0.99
NPAS3-204ENST00000546849 FAM209AQ5JX71 171 aa8.85□□□□□ -0.99
NPAS3-204ENST00000546849 SYNPOQ8N3V7 929 aa8.85□□□□□ -0.99
NPAS3-204ENST00000546849 JMYQ8N9B5 988 aa8.85□□□□□ -0.99
NPAS3-204ENST00000546849 FCRL3Q96P31 734 aaPredicted RBP8.85□□□□□ -0.99
NPAS3-204ENST00000546849 AP5S1Q9NUS5 200 aa8.85□□□□□ -0.99
NPAS3-204ENST00000546849 MRPS23Q9Y3D9 190 aaKnown RBP8.85□□□□□ -0.99
NPAS3-204ENST00000546849 TRBV23OR9-2A0A075B6M9 112 aa8.84□□□□□ -0.99
NPAS3-204ENST00000546849 DUSP4Q13115 394 aa8.84□□□□□ -0.99
NPAS3-204ENST00000546849 CYP2R1Q6VVX0 501 aa8.84□□□□□ -0.99
NPAS3-204ENST00000546849 USP53Q70EK8 1073 aa8.84□□□□□ -0.99
NPAS3-204ENST00000546849 KRTAP1-3Q8IUG1 177 aa8.84□□□□□ -0.99
NPAS3-204ENST00000546849 CCDC120Q96HB5 630 aa8.84□□□□□ -0.99
NPAS3-204ENST00000546849 LMCD1Q9NZU5 365 aa8.84□□□□□ -0.99
NPAS3-204ENST00000546849 SLAMF8Q9P0V8 285 aa8.84□□□□□ -0.99
NPAS3-204ENST00000546849 MEFVO15553 781 aaPredicted RBP8.83□□□□□ -1
NPAS3-204ENST00000546849 TBC1D8O95759 1140 aa8.83□□□□□ -1
NPAS3-204ENST00000546849 PAMP19021 973 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms