RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 SLC25A27O95847 323 aa24.18■■□□□ 1.46
SCARB1-211ENST00000546215 ERCC3P19447 782 aa24.18■■□□□ 1.46
SCARB1-211ENST00000546215 ARHGEF6Q15052 776 aa24.18■■□□□ 1.46
SCARB1-211ENST00000546215 CCDC174Q6PII3 467 aa24.18■■□□□ 1.46
SCARB1-211ENST00000546215 CCAR1Q8IX12 1150 aaKnown RBP24.18■■□□□ 1.46
SCARB1-211ENST00000546215 MTMR8Q96EF0 704 aa24.18■■□□□ 1.46
SCARB1-211ENST00000546215 AGBL1Q96MI9 1066 aa24.18■■□□□ 1.46
SCARB1-211ENST00000546215 LARP6Q9BRS8 491 aaKnown RBP24.18■■□□□ 1.46
SCARB1-211ENST00000546215 VAT1LQ9HCJ6 419 aa24.18■■□□□ 1.46
SCARB1-211ENST00000546215 GOLGA8BA8MQT2 603 aa24.17■■□□□ 1.46
SCARB1-211ENST00000546215 TNPO2O14787 897 aaKnown RBP24.17■■□□□ 1.46
SCARB1-211ENST00000546215 PLEKHA8P1O95397 391 aa24.17■■□□□ 1.46
SCARB1-211ENST00000546215 GNRH1P01148 92 aa24.17■■□□□ 1.46
SCARB1-211ENST00000546215 GNAQP50148 359 aa24.17■■□□□ 1.46
SCARB1-211ENST00000546215 GPR142Q7Z601 462 aa24.17■■□□□ 1.46
SCARB1-211ENST00000546215 FAM217BQ9NTX9 383 aaPredicted RBP24.17■■□□□ 1.46
SCARB1-211ENST00000546215 NAP1L2Q9ULW6 460 aaPredicted RBP24.17■■□□□ 1.46
SCARB1-211ENST00000546215 TRIM17Q9Y577 477 aa24.17■■□□□ 1.46
SCARB1-211ENST00000546215 SMCHD1A6NHR9 2005 aa24.17■■□□□ 1.46
SCARB1-211ENST00000546215 GOLGA8AA7E2F4 631 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 ICAM1P05362 532 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 SMARCA1P28370 1054 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 PDIA3P30101 505 aaKnown RBP24.16■■□□□ 1.46
SCARB1-211ENST00000546215 AK2P54819 239 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 RTN1Q16799 776 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 CTU1Q7Z7A3 348 aaKnown RBP24.16■■□□□ 1.46
SCARB1-211ENST00000546215 NCAPG2Q86XI2 1143 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 SRBD1Q8N5C6 995 aaKnown RBP24.16■■□□□ 1.46
SCARB1-211ENST00000546215 LZTS2Q9BRK4 669 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 SPZ1Q9BXG8 430 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 MROH8Q9H579 483 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 RBM28Q9NW13 759 aaKnown RBP24.16■■□□□ 1.46
SCARB1-211ENST00000546215 DHX16O60231 1041 aaKnown RBP24.16■■□□□ 1.46
SCARB1-211ENST00000546215 CDC27P30260 824 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 METAP2P50579 478 aaKnown RBP eCLIP24.16■■□□□ 1.46
SCARB1-211ENST00000546215 CDC37Q16543 378 aaPredicted RBP24.16■■□□□ 1.46
SCARB1-211ENST00000546215 TMTC3Q6ZXV5 915 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 PLEKHH3Q7Z736 793 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 CMTR1Q8N1G2 835 aaKnown RBP24.16■■□□□ 1.46
SCARB1-211ENST00000546215 COA7Q96BR5 231 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 ZNF274Q96GC6 653 aaPredicted RBP24.16■■□□□ 1.46
SCARB1-211ENST00000546215 NID2Q14112 1375 aa24.16■■□□□ 1.46
SCARB1-211ENST00000546215 CENPFP49454 3210 aa24.15■■□□□ 1.46
SCARB1-211ENST00000546215 COPB2P35606 906 aa24.15■■□□□ 1.46
SCARB1-211ENST00000546215 PPP2R5BQ15173 497 aa24.15■■□□□ 1.46
SCARB1-211ENST00000546215 ANKRD1Q15327 319 aa24.15■■□□□ 1.46
SCARB1-211ENST00000546215 WDR78Q5VTH9 848 aa24.15■■□□□ 1.46
SCARB1-211ENST00000546215 SRRDQ9UH36 339 aa24.15■■□□□ 1.46
SCARB1-211ENST00000546215 GJD2Q9UKL4 321 aa24.15■■□□□ 1.46
SCARB1-211ENST00000546215 HOXD10P28358 340 aa24.14■■□□□ 1.45
SCARB1-211ENST00000546215 ADD1P35611 737 aaKnown RBP24.14■■□□□ 1.45
SCARB1-211ENST00000546215 SLC4A3P48751 1232 aa24.14■■□□□ 1.45
SCARB1-211ENST00000546215 QRICH1Q2TAL8 776 aa24.14■■□□□ 1.45
SCARB1-211ENST00000546215 CCPG1Q9ULG6 757 aa24.14■■□□□ 1.45
SCARB1-211ENST00000546215 TAL1P17542 331 aaPredicted RBP24.13■■□□□ 1.45
SCARB1-211ENST00000546215 PTPREP23469 700 aa24.13■■□□□ 1.45
SCARB1-211ENST00000546215 PIGSQ96S52 555 aa24.13■■□□□ 1.45
SCARB1-211ENST00000546215 TPCN1Q9ULQ1 816 aa24.13■■□□□ 1.45
SCARB1-211ENST00000546215 GABRQQ9UN88 632 aa24.13■■□□□ 1.45
SCARB1-211ENST00000546215 MYH6P13533 1939 aa24.13■■□□□ 1.45
SCARB1-211ENST00000546215 ZBTB5O15062 677 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 PRKCZQ05513 592 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 FUT2Q10981 343 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 RABEP1Q15276 862 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 TKFCQ3LXA3 575 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 MORN1Q5T089 497 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 CCDC82Q8N4S0 544 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 CHST13Q8NET6 341 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 CWC22Q9HCG8 908 aaKnown RBP24.12■■□□□ 1.45
SCARB1-211ENST00000546215 PNMA2Q9UL42 364 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 PLXNB2O15031 1838 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 CCDC196A0A1B0GTZ2 297 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 STRNO43815 780 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 ALAS1P13196 640 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 GRB14Q14449 540 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 HOMER1Q86YM7 354 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 TRERF1Q96PN7 1200 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 HOMER2Q9NSB8 354 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 IVNS1ABPQ9Y6Y0 642 aa24.12■■□□□ 1.45
SCARB1-211ENST00000546215 PPP1R11O60927 126 aaPredicted RBP24.11■■□□□ 1.45
SCARB1-211ENST00000546215 FLT3LGP49771 235 aa24.11■■□□□ 1.45
SCARB1-211ENST00000546215 PRMT2P55345 433 aa24.11■■□□□ 1.45
SCARB1-211ENST00000546215 CCT2P78371 535 aaKnown RBP24.11■■□□□ 1.45
SCARB1-211ENST00000546215 COL13A1Q5TAT6 717 aaPredicted RBP24.11■■□□□ 1.45
SCARB1-211ENST00000546215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.11■■□□□ 1.451e-7■□□□□ 8.9
SCARB1-211ENST00000546215 ABRAQ8N0Z2 381 aa24.11■■□□□ 1.45
SCARB1-211ENST00000546215 USP6NLQ92738 828 aa24.11■■□□□ 1.45
SCARB1-211ENST00000546215 RNF146Q9NTX7 359 aa24.11■■□□□ 1.45
SCARB1-211ENST00000546215 PTPN22Q9Y2R2 807 aa24.11■■□□□ 1.45
SCARB1-211ENST00000546215 PNMA6FA0A0J9YX94 578 aa24.1■■□□□ 1.45
SCARB1-211ENST00000546215 SLC15A5A6NIM6 579 aa24.1■■□□□ 1.45
SCARB1-211ENST00000546215 FCER1AP12319 257 aa24.1■■□□□ 1.45
SCARB1-211ENST00000546215 PKN2Q16513 984 aaKnown RBP24.1■■□□□ 1.45
SCARB1-211ENST00000546215 MUM1L1Q5H9M0 696 aa24.1■■□□□ 1.45
SCARB1-211ENST00000546215 FBXO11Q86XK2 927 aa24.1■■□□□ 1.45
SCARB1-211ENST00000546215 SOCS4Q8WXH5 440 aa24.1■■□□□ 1.45
SCARB1-211ENST00000546215 NUDT12Q9BQG2 462 aa24.1■■□□□ 1.45
SCARB1-211ENST00000546215 NCOA5Q9HCD5 579 aaKnown RBP24.1■■□□□ 1.45
SCARB1-211ENST00000546215 FBXO40Q9UH90 709 aa24.1■■□□□ 1.45
SCARB1-211ENST00000546215 ZNFX1Q9P2E3 1918 aaKnown RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms