RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 TLR2O60603 784 aa12.47□□□□□ -0.41
PAAF1-216ENST00000546039 AKAP17AQ02040 695 aaKnown RBP12.47□□□□□ -0.41
PAAF1-216ENST00000546039 ST3GAL1Q11201 340 aa12.47□□□□□ -0.41
PAAF1-216ENST00000546039 TRAF1Q13077 416 aa12.47□□□□□ -0.41
PAAF1-216ENST00000546039 CRHR2Q13324 411 aa12.47□□□□□ -0.41
PAAF1-216ENST00000546039 FAM110CQ1W6H9 321 aa12.47□□□□□ -0.41
PAAF1-216ENST00000546039 REPS2Q8NFH8 660 aa12.47□□□□□ -0.41
PAAF1-216ENST00000546039 LLPHQ9BRT6 129 aaKnown RBP12.47□□□□□ -0.41
PAAF1-216ENST00000546039 PAGR1Q9BTK6 254 aa12.47□□□□□ -0.41
PAAF1-216ENST00000546039 VAT1LQ9HCJ6 419 aa12.47□□□□□ -0.41
PAAF1-216ENST00000546039 MORF4L1Q9UBU8 362 aa12.47□□□□□ -0.41
PAAF1-216ENST00000546039 PNMA6FA0A0J9YX94 578 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 hCG_1984214I3L0E3 225 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.41
PAAF1-216ENST00000546039 FMNL1O95466 1100 aaPredicted RBP12.46□□□□□ -0.41
PAAF1-216ENST00000546039 ICAM1P05362 532 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 BCRP11274 1271 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 KCNA4P22459 653 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 COPB2P35606 906 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 ANP32AP39687 249 aaKnown RBP12.46□□□□□ -0.41
PAAF1-216ENST00000546039 ERVK-9P63128 1117 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 ERVK-24P63145 666 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 SSRP1Q08945 709 aaKnown RBP12.46□□□□□ -0.41
PAAF1-216ENST00000546039 CUL4AQ13619 759 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 BECN1Q14457 450 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 TMEM132BQ14DG7 1078 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 QRICH1Q2TAL8 776 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 HOMER1Q86YM7 354 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 CMTR1Q8N1G2 835 aaKnown RBP12.46□□□□□ -0.41
PAAF1-216ENST00000546039 CCDC82Q8N4S0 544 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 ZNF713Q8N859 430 aaPredicted RBP12.46□□□□□ -0.41
PAAF1-216ENST00000546039 NSUN7Q8NE18 718 aaKnown RBP12.46□□□□□ -0.41
PAAF1-216ENST00000546039 PIGSQ96S52 555 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 BEGAINQ9BUH8 593 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 SLC26A6Q9BXS9 759 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 TEX13BQ9BXU2 312 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 RNF186Q9NXI6 227 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 BTBD7Q9P203 1132 aa12.46□□□□□ -0.41
PAAF1-216ENST00000546039 ZNF214Q9UL59 606 aaPredicted RBP12.46□□□□□ -0.41
PAAF1-216ENST00000546039 MYH15Q9Y2K3 1946 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 ZNF536O15090 1300 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 PTPDC1A2A3K4 754 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 TRPA1O75762 1119 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 CNMDO75829 334 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 DEXIO95424 95 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 CTDNEP1O95476 244 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 CCNA1P78396 465 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 HMGN5P82970 282 aaKnown RBP12.45□□□□□ -0.42
PAAF1-216ENST00000546039 TKFCQ3LXA3 575 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 SNRNP48Q6IEG0 339 aaKnown RBP12.45□□□□□ -0.42
PAAF1-216ENST00000546039 CCDC174Q6PII3 467 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 C17orf99Q6UX52 265 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 FBXO11Q86XK2 927 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 ANKRD13CQ8N6S4 541 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 PHKBQ93100 1093 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 AMNQ9BXJ7 453 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 SPATC1LQ9H0A9 340 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 TXNRD2Q9NNW7 524 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 RBPJLQ9UBG7 517 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 CPA4Q9UI42 421 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 CCPG1Q9ULG6 757 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.45□□□□□ -0.42
PAAF1-216ENST00000546039 MCM3APO60318 1980 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 MYH7BA7E2Y1 1941 aa12.45□□□□□ -0.42
PAAF1-216ENST00000546039 ABCB11O95342 1321 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 SLC25A27O95847 323 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 SCG2P13521 617 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 STAT3P40763 770 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 SNAP25P60880 206 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 PLS1Q14651 629 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 PFKFB3Q16875 520 aaPredicted RBP12.44□□□□□ -0.42
PAAF1-216ENST00000546039 NOM1Q5C9Z4 860 aaKnown RBP12.44□□□□□ -0.42
PAAF1-216ENST00000546039 PPP1R18Q6NYC8 613 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 POTEEQ6S8J3 1075 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 RIOX2Q8IUF8 465 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 CPXCR1Q8N123 301 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 JMYQ8N9B5 988 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 SHCBP1Q8NEM2 672 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 GPRC5AQ8NFJ5 357 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 SMARCC2Q8TAQ2 1214 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 PIBF1Q8WXW3 757 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 WASF1Q92558 559 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 INTS4Q96HW7 963 aaKnown RBP12.44□□□□□ -0.42
PAAF1-216ENST00000546039 RAVER2Q9HCJ3 691 aaKnown RBP12.44□□□□□ -0.42
PAAF1-216ENST00000546039 TSHZ2Q9NRE2 1034 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 WBP1LQ9NX94 342 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
PAAF1-216ENST00000546039 KIF3AQ9Y496 699 aa12.44□□□□□ -0.42
PAAF1-216ENST00000546039 V9GY48 417 aaPredicted RBP12.44□□□□□ -0.42
PAAF1-216ENST00000546039 USH1GQ495M9 461 aa12.43□□□□□ -0.42
PAAF1-216ENST00000546039 FAM177A1Q8N128 213 aaPredicted RBP12.43□□□□□ -0.42
PAAF1-216ENST00000546039 CCDC12Q8WUD4 166 aaPredicted RBP12.43□□□□□ -0.42
PAAF1-216ENST00000546039 AGBL1Q96MI9 1066 aa12.43□□□□□ -0.42
PAAF1-216ENST00000546039 MOV10L1Q9BXT6 1211 aaKnown RBP12.43□□□□□ -0.42
PAAF1-216ENST00000546039 FBXO40Q9UH90 709 aa12.43□□□□□ -0.42
PAAF1-216ENST00000546039 LRRC37A2A6NM11 1700 aa12.42□□□□□ -0.42
PAAF1-216ENST00000546039 hCG_1642624A0A1W2PR95 340 aa12.42□□□□□ -0.42
PAAF1-216ENST00000546039 JAK2O60674 1132 aa12.42□□□□□ -0.42
PAAF1-216ENST00000546039 PPP1R11O60927 126 aaPredicted RBP12.42□□□□□ -0.42
PAAF1-216ENST00000546039 TBC1D8O95759 1140 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms