RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 LIG1P18858 919 aa11.63□□□□□ -0.55
CIT-218ENST00000546026 PTPREP23469 700 aa11.63□□□□□ -0.55
CIT-218ENST00000546026 FAM83BQ5T0W9 1011 aa11.63□□□□□ -0.55
CIT-218ENST00000546026 AXDND1Q5T1B0 1012 aaPredicted RBP11.63□□□□□ -0.55
CIT-218ENST00000546026 PRAMEF18Q5VWM3 479 aa11.63□□□□□ -0.55
CIT-218ENST00000546026 PNMA8AQ86V59 439 aaPredicted RBP11.63□□□□□ -0.55
CIT-218ENST00000546026 FBXO11Q86XK2 927 aa11.63□□□□□ -0.55
CIT-218ENST00000546026 SPICE1Q8N0Z3 855 aa11.63□□□□□ -0.55
CIT-218ENST00000546026 MRPS27Q92552 414 aaKnown RBP11.63□□□□□ -0.55
CIT-218ENST00000546026 AMNQ9BXJ7 453 aa11.63□□□□□ -0.55
CIT-218ENST00000546026 TAF1DQ9H5J8 278 aaPredicted RBP11.63□□□□□ -0.55
CIT-218ENST00000546026 PRR12Q9ULL5 1215 aa11.63□□□□□ -0.55
CIT-218ENST00000546026 POLR2AP24928 1970 aaKnown RBP11.63□□□□□ -0.55
CIT-218ENST00000546026 SSC5DA1L4H1 1573 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 FAM237AA0A1B0GTK4 181 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 FAM205CA6NFA0 338 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 C19orf81C9J6K1 198 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 ADAMTS3O15072 1205 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 PPP1R12BO60237 982 aaPredicted RBP11.62□□□□□ -0.55
CIT-218ENST00000546026 MAP3K9P80192 1104 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 ORC2Q13416 577 aaPredicted RBP11.62□□□□□ -0.55
CIT-218ENST00000546026 NONOQ15233 471 aaKnown RBP eCLIP11.62□□□□□ -0.55
CIT-218ENST00000546026 CCDC73Q6ZRK6 1079 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 KRT26Q7Z3Y9 468 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 REXO1Q8N1G1 1221 aaKnown RBP11.62□□□□□ -0.55
CIT-218ENST00000546026 KRI1Q8N9T8 703 aaKnown RBP11.62□□□□□ -0.55
CIT-218ENST00000546026 FSIP1Q8NA03 581 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
CIT-218ENST00000546026 ZNF280CQ8ND82 737 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 ENGASEQ8NFI3 743 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.62□□□□□ -0.55
CIT-218ENST00000546026 CUL5Q93034 780 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 GLIS2Q9BZE0 524 aaPredicted RBP11.62□□□□□ -0.55
CIT-218ENST00000546026 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.62□□□□□ -0.55
CIT-218ENST00000546026 PCDHA1Q9Y5I3 950 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 SRPRBQ9Y5M8 271 aaKnown RBP11.62□□□□□ -0.55
CIT-218ENST00000546026 WDR90Q96KV7 1748 aa11.62□□□□□ -0.55
CIT-218ENST00000546026 POTECB2RU33 542 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 SOCS7O14512 581 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 FDX1P10109 184 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 ATP2B1P20020 1258 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 MARCKSP29966 332 aaPredicted RBP11.61□□□□□ -0.55
CIT-218ENST00000546026 NF2P35240 595 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 CLK2P49760 499 aaKnown RBP11.61□□□□□ -0.55
CIT-218ENST00000546026 BACE1P56817 501 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 FAM160A1Q05DH4 1040 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 ZNF174Q15697 407 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 ZYXQ15942 572 aaKnown RBP11.61□□□□□ -0.55
CIT-218ENST00000546026 TPRNQ4KMQ1 711 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 NOM1Q5C9Z4 860 aaKnown RBP11.61□□□□□ -0.55
CIT-218ENST00000546026 CCDC84Q86UT8 332 aaPredicted RBP11.61□□□□□ -0.55
CIT-218ENST00000546026 PRPF38AQ8NAV1 312 aaKnown RBP11.61□□□□□ -0.55
CIT-218ENST00000546026 ZKSCAN4Q969J2 545 aaPredicted RBP11.61□□□□□ -0.55
CIT-218ENST00000546026 FERMT2Q96AC1 680 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 C12orf42Q96LP6 360 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 RANBP17Q9H2T7 1088 aaKnown RBP11.61□□□□□ -0.55
CIT-218ENST00000546026 PSTPIP2Q9H939 334 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 DACT1Q9NYF0 836 aa11.61□□□□□ -0.55
CIT-218ENST00000546026 FBXO2Q9UK22 296 aaPredicted RBP11.61□□□□□ -0.55
CIT-218ENST00000546026 ADM5C9JUS6 153 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 LAD1O00515 517 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 CTAGE5O15320 804 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 NR1I2O75469 434 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 IREB2P48200 963 aaKnown RBP11.6□□□□□ -0.55
CIT-218ENST00000546026 ATP2C1P98194 919 aaPredicted RBP11.6□□□□□ -0.55
CIT-218ENST00000546026 SPP2Q13103 211 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 RESP18Q5W5W9 173 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 ARL6IP4Q66PJ3 421 aaKnown RBP11.6□□□□□ -0.55
CIT-218ENST00000546026 LRSAM1Q6UWE0 723 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 FMR1NBQ8N0W7 255 aaPredicted RBP11.6□□□□□ -0.55
CIT-218ENST00000546026 RBM46Q8TBY0 533 aaKnown RBP11.6□□□□□ -0.55
CIT-218ENST00000546026 RASGRP4Q8TDF6 673 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 CDCA5Q96FF9 252 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 NAP1L4Q99733 375 aaKnown RBP11.6□□□□□ -0.55
CIT-218ENST00000546026 NUP62CLQ9H1M0 184 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 GOLPH3LQ9H4A5 285 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 CLSTN2Q9H4D0 955 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 BIN2Q9UBW5 565 aaPredicted RBP11.6□□□□□ -0.55
CIT-218ENST00000546026 PNMA2Q9UL42 364 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 ZHX2Q9Y6X8 837 aa11.6□□□□□ -0.55
CIT-218ENST00000546026 FOSP01100 380 aaPredicted RBP11.59□□□□□ -0.55
CIT-218ENST00000546026 PTGDRQ13258 359 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 AP3B2Q13367 1082 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
CIT-218ENST00000546026 MTMR2Q13614 643 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 MAP3K11Q16584 847 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 INF2Q27J81 1249 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 SH3D19Q5HYK7 790 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 JAKMIP3Q5VZ66 844 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 SHC4Q6S5L8 630 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.59□□□□□ -0.55
CIT-218ENST00000546026 NEK8Q86SG6 692 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 C4orf32Q8N8J7 132 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 KIFC2Q96AC6 838 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 TIGD1Q96MW7 591 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 SLF1Q9BQI6 1058 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 TNMDQ9H2S6 317 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 FAM13BQ9NYF5 915 aa11.59□□□□□ -0.55
CIT-218ENST00000546026 HPSEQ9Y251 543 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms