RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 ASCC2Q9H1I8 757 aaPredicted RBP19.68■□□□□ 0.74
CADM1-220ENST00000546000 SEC63Q9UGP8 760 aaKnown RBP19.68■□□□□ 0.74
CADM1-220ENST00000546000 KCNJ14Q9UNX9 436 aa19.68■□□□□ 0.74
CADM1-220ENST00000546000 STXBP3O00186 592 aa19.67■□□□□ 0.74
CADM1-220ENST00000546000 IGF2BP3O00425 579 aaKnown RBP eCLIP19.67■□□□□ 0.74
CADM1-220ENST00000546000 ZBTB5O15062 677 aa19.67■□□□□ 0.74
CADM1-220ENST00000546000 SYT1P21579 422 aa19.67■□□□□ 0.74
CADM1-220ENST00000546000 DSG3P32926 999 aa19.67■□□□□ 0.74
CADM1-220ENST00000546000 USH1GQ495M9 461 aa19.67■□□□□ 0.74
CADM1-220ENST00000546000 PNMA6FA0A0J9YX94 578 aa19.66■□□□□ 0.74
CADM1-220ENST00000546000 VPS37CA5D8V6 355 aaPredicted RBP19.66■□□□□ 0.74
CADM1-220ENST00000546000 RASSF10A6NK89 507 aa19.66■□□□□ 0.74
CADM1-220ENST00000546000 CYP2C8P10632 490 aa19.66■□□□□ 0.74
CADM1-220ENST00000546000 HOXA7P31268 230 aaPredicted RBP19.66■□□□□ 0.74
CADM1-220ENST00000546000 IRX3P78415 501 aaPredicted RBP19.66■□□□□ 0.74
CADM1-220ENST00000546000 PRPF38AQ8NAV1 312 aaKnown RBP19.66■□□□□ 0.74
CADM1-220ENST00000546000 REPS2Q8NFH8 660 aa19.66■□□□□ 0.74
CADM1-220ENST00000546000 HHIPL1Q96JK4 782 aa19.66■□□□□ 0.74
CADM1-220ENST00000546000 C8orf76Q96K31 380 aa19.66■□□□□ 0.74
CADM1-220ENST00000546000 P2RX7Q99572 595 aaKnown RBP19.66■□□□□ 0.74
CADM1-220ENST00000546000 RAVER2Q9HCJ3 691 aaKnown RBP19.66■□□□□ 0.74
CADM1-220ENST00000546000 ZNF536O15090 1300 aa19.66■□□□□ 0.74
CADM1-220ENST00000546000 PDHXO00330 501 aa19.65■□□□□ 0.74
CADM1-220ENST00000546000 VWA5AO00534 786 aa19.65■□□□□ 0.74
CADM1-220ENST00000546000 COG2Q14746 738 aa19.65■□□□□ 0.74
CADM1-220ENST00000546000 LARP1BQ659C4 914 aaKnown RBP19.65■□□□□ 0.74
CADM1-220ENST00000546000 CPXCR1Q8N123 301 aa19.65■□□□□ 0.74
CADM1-220ENST00000546000 CCDC102AQ96A19 550 aa19.65■□□□□ 0.74
CADM1-220ENST00000546000 CAPNS2Q96L46 248 aa19.65■□□□□ 0.74
CADM1-220ENST00000546000 AGBL1Q96MI9 1066 aa19.65■□□□□ 0.74
CADM1-220ENST00000546000 SLC38A10Q9HBR0 1119 aa19.65■□□□□ 0.74
CADM1-220ENST00000546000 CWC22Q9HCG8 908 aaKnown RBP19.65■□□□□ 0.74
CADM1-220ENST00000546000 TESPA1A2RU30 521 aaPredicted RBP19.64■□□□□ 0.73
CADM1-220ENST00000546000 MANSC4A6NHS7 340 aaPredicted RBP19.64■□□□□ 0.73
CADM1-220ENST00000546000 HERVK_113P62684 666 aa19.64■□□□□ 0.73
CADM1-220ENST00000546000 KIF23Q02241 960 aaPredicted RBP19.64■□□□□ 0.73
CADM1-220ENST00000546000 DEFB115Q30KQ5 88 aa19.64■□□□□ 0.73
CADM1-220ENST00000546000 KRT40Q6A162 431 aa19.64■□□□□ 0.73
CADM1-220ENST00000546000 ANKRD23Q86SG2 305 aa19.64■□□□□ 0.73
CADM1-220ENST00000546000 FBXO11Q86XK2 927 aa19.64■□□□□ 0.73
CADM1-220ENST00000546000 WASF1Q92558 559 aa19.64■□□□□ 0.73
CADM1-220ENST00000546000 BARHL2Q9NY43 387 aa19.64■□□□□ 0.73
CADM1-220ENST00000546000 MTMR6Q9Y217 621 aa19.64■□□□□ 0.73
CADM1-220ENST00000546000 SMCHD1A6NHR9 2005 aa19.64■□□□□ 0.73
CADM1-220ENST00000546000 STX6O43752 255 aa19.63■□□□□ 0.73
CADM1-220ENST00000546000 CNMDO75829 334 aa19.63■□□□□ 0.73
CADM1-220ENST00000546000 OSBPP22059 807 aa19.63■□□□□ 0.73
CADM1-220ENST00000546000 NAPAP54920 295 aa19.63■□□□□ 0.73
CADM1-220ENST00000546000 TMEM132BQ14DG7 1078 aa19.63■□□□□ 0.73
CADM1-220ENST00000546000 PAGR1Q9BTK6 254 aa19.63■□□□□ 0.73
CADM1-220ENST00000546000 BTBD7Q9P203 1132 aa19.63■□□□□ 0.73
CADM1-220ENST00000546000 RBM27Q9P2N5 1060 aaKnown RBP19.63■□□□□ 0.73
CADM1-220ENST00000546000 CCPG1Q9ULG6 757 aa19.63■□□□□ 0.73
CADM1-220ENST00000546000 ZDHHC9Q9Y397 364 aa19.63■□□□□ 0.73
CADM1-220ENST00000546000 MYPNQ86TC9 1320 aa19.62■□□□□ 0.73
CADM1-220ENST00000546000 KIF28PB7ZC32 967 aa19.62■□□□□ 0.73
CADM1-220ENST00000546000 H3BQV1 296 aa19.62■□□□□ 0.73
CADM1-220ENST00000546000 ZBED4O75132 1171 aa19.62■□□□□ 0.73
CADM1-220ENST00000546000 PABPC4Q13310 644 aaKnown RBP eCLIP19.62■□□□□ 0.73
CADM1-220ENST00000546000 NPY5RQ15761 445 aa19.62■□□□□ 0.73
CADM1-220ENST00000546000 FERMT3Q86UX7 667 aa19.62■□□□□ 0.73
CADM1-220ENST00000546000 OXER1Q8TDS5 423 aa19.62■□□□□ 0.73
CADM1-220ENST00000546000 TXNRD2Q9NNW7 524 aa19.62■□□□□ 0.73
CADM1-220ENST00000546000 ZNF214Q9UL59 606 aaPredicted RBP19.62■□□□□ 0.73
CADM1-220ENST00000546000 ADAMTS5Q9UNA0 930 aa19.62■□□□□ 0.73
CADM1-220ENST00000546000 KIF3AQ9Y496 699 aa19.62■□□□□ 0.73
CADM1-220ENST00000546000 PCDHA1Q9Y5I3 950 aa19.62■□□□□ 0.73
CADM1-220ENST00000546000 NOM1Q5C9Z4 860 aaKnown RBP19.61■□□□□ 0.73
CADM1-220ENST00000546000 FBXO18Q8NFZ0 1043 aa19.61■□□□□ 0.73
CADM1-220ENST00000546000 RASGRP4Q8TDF6 673 aa19.61■□□□□ 0.73
CADM1-220ENST00000546000 PHF20Q9BVI0 1012 aa19.61■□□□□ 0.73
CADM1-220ENST00000546000 AMNQ9BXJ7 453 aa19.61■□□□□ 0.73
CADM1-220ENST00000546000 HOMER2Q9NSB8 354 aa19.61■□□□□ 0.73
CADM1-220ENST00000546000 CTDP1Q9Y5B0 961 aaPredicted RBP19.61■□□□□ 0.73
CADM1-220ENST00000546000 OPLAHO14841 1288 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 MMP1P03956 469 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 ICAM1P05362 532 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 NLRP5P59047 1200 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 TRIM29Q14134 588 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 PLS1Q14651 629 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 UBE2SQ16763 222 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 LBX2Q6XYB7 198 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 IFNL1Q8IU54 200 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 CHAMP1Q96JM3 812 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 R3HDMLQ9H3Y0 253 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 HOXC10Q9NYD6 342 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 RIPK3Q9Y572 518 aa19.6■□□□□ 0.73
CADM1-220ENST00000546000 THSD7BQ9C0I4 1608 aa19.59■□□□□ 0.73
CADM1-220ENST00000546000 BRD1O95696 1058 aa19.59■□□□□ 0.73
CADM1-220ENST00000546000 ALAS1P13196 640 aa19.59■□□□□ 0.73
CADM1-220ENST00000546000 PDCP20941 246 aa19.59■□□□□ 0.73
CADM1-220ENST00000546000 VEGFBP49765 207 aa19.59■□□□□ 0.73
CADM1-220ENST00000546000 NR5A1Q13285 461 aa19.59■□□□□ 0.73
CADM1-220ENST00000546000 MUM1L1Q5H9M0 696 aa19.59■□□□□ 0.73
CADM1-220ENST00000546000 COL13A1Q5TAT6 717 aaPredicted RBP19.59■□□□□ 0.73
CADM1-220ENST00000546000 MCTP1Q6DN14 999 aa19.59■□□□□ 0.73
CADM1-220ENST00000546000 SNRNP48Q6IEG0 339 aaKnown RBP19.59■□□□□ 0.73
CADM1-220ENST00000546000 PNMA3Q9UL41 463 aa19.59■□□□□ 0.73
CADM1-220ENST00000546000 SLC45A1Q9Y2W3 748 aa19.59■□□□□ 0.73
CADM1-220ENST00000546000 WDR33Q9C0J8 1336 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms