RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 LLPHQ9BRT6 129 aaKnown RBP11.29□□□□□ -0.6
DDB1-225ENST00000545930 VCPKMTQ9H867 229 aa11.29□□□□□ -0.6
DDB1-225ENST00000545930 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
DDB1-225ENST00000545930 BRPF3Q9ULD4 1205 aa11.29□□□□□ -0.6
DDB1-225ENST00000545930 SNCAIPQ9Y6H5 919 aa11.29□□□□□ -0.6
DDB1-225ENST00000545930 SPDYE5A6NIY4 337 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 TMEM88BA6NKF7 163 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 RAD21O60216 631 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 SLC1A4P43007 532 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 HUNKP57058 714 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 AKAP17AQ02040 695 aaKnown RBP11.28□□□□□ -0.6
DDB1-225ENST00000545930 STK3Q13188 491 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 COL9A3Q14050 684 aaPredicted RBP11.28□□□□□ -0.6
DDB1-225ENST00000545930 RTN1Q16799 776 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 SH3D19Q5HYK7 790 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 SLFN13Q68D06 897 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 BLOC1S3Q6QNY0 202 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 MICU3Q86XE3 530 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 SIAH1Q8IUQ4 282 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 CHURC1Q8WUH1 139 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 GMCL1Q96IK5 515 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 HHIPL1Q96JK4 782 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 ELP3Q9H9T3 547 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 FZD1Q9UP38 647 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 AFG3L2Q9Y4W6 797 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 NID2Q14112 1375 aa11.28□□□□□ -0.6
DDB1-225ENST00000545930 SNHG28P0DPA3 235 aa11.27□□□□□ -0.61
DDB1-225ENST00000545930 ZBTB48P10074 688 aaPredicted RBP11.27□□□□□ -0.61
DDB1-225ENST00000545930 PDHBP11177 359 aa11.27□□□□□ -0.61
DDB1-225ENST00000545930 BMP3P12645 472 aa11.27□□□□□ -0.61
DDB1-225ENST00000545930 CCT2P78371 535 aaKnown RBP11.27□□□□□ -0.61
DDB1-225ENST00000545930 HMGN5P82970 282 aaKnown RBP11.27□□□□□ -0.61
DDB1-225ENST00000545930 FMR1Q06787 632 aaKnown RBP eCLIP11.27□□□□□ -0.619e-8■■■■■ 31
DDB1-225ENST00000545930 PABPC4Q13310 644 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDB1-225ENST00000545930 SNAPC2Q13487 334 aa11.27□□□□□ -0.61
DDB1-225ENST00000545930 CUL4AQ13619 759 aa11.27□□□□□ -0.61
DDB1-225ENST00000545930 GRM4Q14833 912 aa11.27□□□□□ -0.61
DDB1-225ENST00000545930 FASTKD5Q7L8L6 764 aaKnown RBP11.27□□□□□ -0.61
DDB1-225ENST00000545930 LRRC47Q8N1G4 583 aaKnown RBP11.27□□□□□ -0.61
DDB1-225ENST00000545930 GTF3C6Q969F1 213 aa11.27□□□□□ -0.61
DDB1-225ENST00000545930 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
DDB1-225ENST00000545930 OPTNQ96CV9 577 aa11.27□□□□□ -0.61
DDB1-225ENST00000545930 SENP2Q9HC62 589 aa11.27□□□□□ -0.61
DDB1-225ENST00000545930 CWC22Q9HCG8 908 aaKnown RBP11.27□□□□□ -0.61
DDB1-225ENST00000545930 A0A1W2PRG0 241 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 KLRF2D3W0D1 207 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 WDR46O15213 610 aaKnown RBP11.26□□□□□ -0.61
DDB1-225ENST00000545930 PLA2G6O60733 806 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 CD2BP2O95400 341 aaKnown RBP11.26□□□□□ -0.61
DDB1-225ENST00000545930 CFHP08603 1231 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 FDX1P10109 184 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 ECE1P42892 770 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 ZNF157P51786 506 aaPredicted RBP11.26□□□□□ -0.61
DDB1-225ENST00000545930 GTF2A2P52657 109 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 INHBEP58166 350 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 SCRN1Q12765 414 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 TRAF1Q13077 416 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 HIC1Q14526 733 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 CCDC96Q2M329 555 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 SMYD5Q6GMV2 418 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 MOB2Q70IA6 237 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 SAPCD2Q86UD0 394 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 FAM160B2Q86V87 743 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 CLEC10AQ8IUN9 316 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 TRIM22Q8IYM9 498 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
DDB1-225ENST00000545930 ACER1Q8TDN7 264 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 WASF1Q92558 559 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 CLMNQ96JQ2 1002 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 C12orf42Q96LP6 360 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 IPO9Q96P70 1041 aaKnown RBP11.26□□□□□ -0.61
DDB1-225ENST00000545930 FEM1BQ9UK73 627 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 ISY1Q9ULR0 285 aaKnown RBP11.26□□□□□ -0.61
DDB1-225ENST00000545930 KCNH4Q9UQ05 1017 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 TLL2Q9Y6L7 1015 aa11.26□□□□□ -0.61
DDB1-225ENST00000545930 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
DDB1-225ENST00000545930 TRIM75PA6NK02 468 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 IRF6O14896 467 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 NDUFB10O96000 172 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 CETPP11597 493 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 IFNAR1P17181 557 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 ADD1P35611 737 aaKnown RBP11.25□□□□□ -0.61
DDB1-225ENST00000545930 STAT2P52630 851 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 SSRP1Q08945 709 aaKnown RBP11.25□□□□□ -0.61
DDB1-225ENST00000545930 ZNF543Q08ER8 600 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 IKQ13123 557 aaPredicted RBP11.25□□□□□ -0.61
DDB1-225ENST00000545930 MTMR2Q13614 643 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 ZYXQ15942 572 aaKnown RBP11.25□□□□□ -0.61
DDB1-225ENST00000545930 SHROOM1Q2M3G4 852 aaPredicted RBP11.25□□□□□ -0.61
DDB1-225ENST00000545930 RGMBQ6NW40 437 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 ANKLE1Q8NAG6 615 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 MYL10Q9BUA6 226 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 MAD2L2Q9UI95 211 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 ABT1Q9ULW3 272 aaKnown RBP11.25□□□□□ -0.61
DDB1-225ENST00000545930 SMC3Q9UQE7 1217 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 MTMR7Q9Y216 660 aa11.25□□□□□ -0.61
DDB1-225ENST00000545930 A0A0G2JLL6 359 aaPredicted RBP11.24□□□□□ -0.61
DDB1-225ENST00000545930 USP17L15C9J2P7 530 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 USP17L13C9JLJ4 530 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms