RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 DTHD1Q6ZMT9 781 aa17.18■□□□□ 0.34
CNN3-207ENST00000545882 DAGLBQ8NCG7 672 aa17.18■□□□□ 0.34
CNN3-207ENST00000545882 NEK11Q8NG66 645 aa17.18■□□□□ 0.34
CNN3-207ENST00000545882 DNAJC7Q99615 494 aa17.18■□□□□ 0.34
CNN3-207ENST00000545882 KBTBD4Q9NVX7 518 aa17.18■□□□□ 0.34
CNN3-207ENST00000545882 NARFQ9UHQ1 456 aa17.18■□□□□ 0.34
CNN3-207ENST00000545882 L1RE1Q9UN81 338 aa17.18■□□□□ 0.34
CNN3-207ENST00000545882 A0A1W2PQC6 194 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 RPS6KA4O75676 772 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 RHOBTB3O94955 611 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 HERVK_113P62684 666 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 INF2Q27J81 1249 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 NOA1Q8NC60 698 aaKnown RBP17.17■□□□□ 0.34
CNN3-207ENST00000545882 GIMAP8Q8ND71 665 aaPredicted RBP17.17■□□□□ 0.34
CNN3-207ENST00000545882 PLIN2Q99541 437 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 CCSER1Q9C0I3 900 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 SUGCTQ9HAC7 445 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 TAF1LQ8IZX4 1826 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 USP17L3A6NCW0 530 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 USP17L4A6NCW7 530 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 STXBP3O00186 592 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 TOM1O60784 492 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 RHOXF2BP0C7M4 288 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 EEF1GP26641 437 aaKnown RBP17.17■□□□□ 0.34
CNN3-207ENST00000545882 VSNL1P62760 191 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 PIP4K2BP78356 416 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 TTI2Q6NXR4 508 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 USP17L1Q7RTZ2 530 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 OR8K1Q8NGG5 319 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 DUSP9Q99956 384 aaKnown RBP17.17■□□□□ 0.34
CNN3-207ENST00000545882 RHOXF2Q9BQY4 288 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 THAP9Q9H5L6 903 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 MYO6Q9UM54 1294 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 CAPN11Q9UMQ6 739 aa17.17■□□□□ 0.34
CNN3-207ENST00000545882 LY75O60449 1722 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 FLT1P17948 1338 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 CCDC194A0A1B0GVG4 234 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 CTAGE15A4D2H0 777 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 RASSF10A6NK89 507 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 CTAGE8P0CG41 777 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 GTF2E1P29083 439 aaPredicted RBP17.16■□□□□ 0.34
CNN3-207ENST00000545882 TUBB4BP68371 445 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 NCAPH2Q6IBW4 605 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 CTAGE6Q86UF2 777 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 CTAGE4Q8IX94 777 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 CCDC24Q8N4L8 307 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 NYXQ9GZU5 481 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 ANKRD2Q9GZV1 360 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 CALCOCO1Q9P1Z2 691 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 TFR2Q9UP52 801 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 ROBO3Q96MS0 1386 aa17.16■□□□□ 0.34
CNN3-207ENST00000545882 TNRC6CQ9HCJ0 1690 aaKnown RBP17.16■□□□□ 0.34
CNN3-207ENST00000545882 ZBTB22O15209 634 aa17.15■□□□□ 0.34
CNN3-207ENST00000545882 TM4SF1P30408 202 aa17.15■□□□□ 0.34
CNN3-207ENST00000545882 TMED8Q6PL24 325 aaPredicted RBP17.15■□□□□ 0.34
CNN3-207ENST00000545882 TRAPPC11Q7Z392 1133 aa17.15■□□□□ 0.34
CNN3-207ENST00000545882 SLC51AQ86UW1 340 aa17.15■□□□□ 0.34
CNN3-207ENST00000545882 MSL3Q8N5Y2 521 aaKnown RBP17.15■□□□□ 0.34
CNN3-207ENST00000545882 SH3RF3Q8TEJ3 882 aaPredicted RBP17.15■□□□□ 0.34
CNN3-207ENST00000545882 TTYH3Q9C0H2 523 aa17.15■□□□□ 0.34
CNN3-207ENST00000545882 PDE11AQ9HCR9 933 aa17.15■□□□□ 0.34
CNN3-207ENST00000545882 GUCA1BQ9UMX6 200 aa17.15■□□□□ 0.34
CNN3-207ENST00000545882 LUC7L2Q9Y383 392 aaKnown RBP17.15■□□□□ 0.34
CNN3-207ENST00000545882 HDXQ7Z353 690 aa17.15■□□□□ 0.34
CNN3-207ENST00000545882 FNBP4Q8N3X1 1017 aaPredicted RBP17.15■□□□□ 0.34
CNN3-207ENST00000545882 C8orf37Q96NL8 207 aa17.15■□□□□ 0.34
CNN3-207ENST00000545882 BARHL2Q9NY43 387 aa17.15■□□□□ 0.34
CNN3-207ENST00000545882 SRP68Q9UHB9 627 aaKnown RBP17.15■□□□□ 0.34
CNN3-207ENST00000545882 ADAM21Q9UKJ8 722 aa17.15■□□□□ 0.34
CNN3-207ENST00000545882 PALM3A6NDB9 673 aaPredicted RBP17.14■□□□□ 0.33
CNN3-207ENST00000545882 PSMD14O00487 310 aa17.14■□□□□ 0.33
CNN3-207ENST00000545882 MYL1P05976 194 aa17.14■□□□□ 0.33
CNN3-207ENST00000545882 SRGNP10124 158 aa17.14■□□□□ 0.33
CNN3-207ENST00000545882 UBA7P41226 1012 aa17.14■□□□□ 0.33
CNN3-207ENST00000545882 GRIK5Q16478 980 aa17.14■□□□□ 0.33
CNN3-207ENST00000545882 TRIM47Q96LD4 638 aa17.14■□□□□ 0.33
CNN3-207ENST00000545882 NLRP3Q96P20 1036 aa17.14■□□□□ 0.33
CNN3-207ENST00000545882 HAUS4Q9H6D7 363 aa17.14■□□□□ 0.33
CNN3-207ENST00000545882 TCP11L1Q9NUJ3 509 aa17.14■□□□□ 0.33
CNN3-207ENST00000545882 HDAC6Q9UBN7 1215 aa17.14■□□□□ 0.33
CNN3-207ENST00000545882 PRPHP41219 470 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 GNAQP50148 359 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 MCM6Q14566 821 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 MEA1Q16626 185 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 DZIP1Q86YF9 867 aaKnown RBP17.13■□□□□ 0.33
CNN3-207ENST00000545882 TXLNBQ8N3L3 684 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 SLC44A5Q8NCS7 719 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 DDX60LQ5H9U9 1706 aaKnown RBP17.13■□□□□ 0.33
CNN3-207ENST00000545882 B4DLN1 442 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 NKRFO15226 690 aaKnown RBP eCLIP17.13■□□□□ 0.33
CNN3-207ENST00000545882 N4BP1O75113 896 aaKnown RBP17.13■□□□□ 0.33
CNN3-207ENST00000545882 ERLIN1O75477 346 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 PLCG1P19174 1290 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 KLK7P49862 253 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 DNM2P50570 870 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 GALNT17Q6IS24 598 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 ZNF662Q6ZS27 426 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 CCDC148Q8NFR7 591 aa17.13■□□□□ 0.33
CNN3-207ENST00000545882 EXOC4Q96A65 974 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms