RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 ZBTB5O15062 677 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 PFKFB2O60825 505 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 LACTBP83111 547 aaPredicted RBP13.63□□□□□ -0.23
SNHG1-221ENST00000544983 TMEM132BQ14DG7 1078 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
SNHG1-221ENST00000544983 RASGRP2Q7LDG7 609 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 RIOX2Q8IUF8 465 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 TEX2Q8IWB9 1127 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 CHST13Q8NET6 341 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 RRP36Q96EU6 259 aaKnown RBP13.63□□□□□ -0.23
SNHG1-221ENST00000544983 ABHD8Q96I13 439 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 R3HDMLQ9H3Y0 253 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 JMJD4Q9H9V9 463 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 TXNRD2Q9NNW7 524 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 BTBD7Q9P203 1132 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 SEC63Q9UGP8 760 aaKnown RBP13.63□□□□□ -0.23
SNHG1-221ENST00000544983 FBXO40Q9UH90 709 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 TPCN1Q9ULQ1 816 aa13.63□□□□□ -0.23
SNHG1-221ENST00000544983 hCG_1984214I3L0E3 225 aa13.62□□□□□ -0.23
SNHG1-221ENST00000544983 FOXN1O15353 648 aa13.62□□□□□ -0.23
SNHG1-221ENST00000544983 STRNO43815 780 aa13.62□□□□□ -0.23
SNHG1-221ENST00000544983 CNMDO75829 334 aa13.62□□□□□ -0.23
SNHG1-221ENST00000544983 IFNAR1P17181 557 aa13.62□□□□□ -0.23
SNHG1-221ENST00000544983 RXRAP19793 462 aa13.62□□□□□ -0.23
SNHG1-221ENST00000544983 FCGRTP55899 365 aa13.62□□□□□ -0.23
SNHG1-221ENST00000544983 PLS1Q14651 629 aa13.62□□□□□ -0.23
SNHG1-221ENST00000544983 POTEEQ6S8J3 1075 aa13.62□□□□□ -0.23
SNHG1-221ENST00000544983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNHG1-221ENST00000544983 CCDC144CPQ8IYA2 1237 aa13.62□□□□□ -0.23
SNHG1-221ENST00000544983 SRBD1Q8N5C6 995 aaKnown RBP13.62□□□□□ -0.23
SNHG1-221ENST00000544983 ZNF713Q8N859 430 aaPredicted RBP13.62□□□□□ -0.23
SNHG1-221ENST00000544983 MOV10L1Q9BXT6 1211 aaKnown RBP13.62□□□□□ -0.23
SNHG1-221ENST00000544983 FAM217BQ9NTX9 383 aaPredicted RBP13.62□□□□□ -0.23
SNHG1-221ENST00000544983 CYTH3O43739 400 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 HSPA8P11142 646 aaKnown RBP13.61□□□□□ -0.23
SNHG1-221ENST00000544983 HOXD10P28358 340 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 CDC27P30260 824 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 ADD1P35611 737 aaKnown RBP13.61□□□□□ -0.23
SNHG1-221ENST00000544983 AKAP17AQ02040 695 aaKnown RBP13.61□□□□□ -0.23
SNHG1-221ENST00000544983 FUT2Q10981 343 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 CDC37Q16543 378 aaPredicted RBP13.61□□□□□ -0.23
SNHG1-221ENST00000544983 Q3C1V9 767 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 SNRNP48Q6IEG0 339 aaKnown RBP13.61□□□□□ -0.23
SNHG1-221ENST00000544983 FBXO11Q86XK2 927 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 TRIM22Q8IYM9 498 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 ABRAQ8N0Z2 381 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 CPXCR1Q8N123 301 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 FAM177A1Q8N128 213 aaPredicted RBP13.61□□□□□ -0.23
SNHG1-221ENST00000544983 SAMD3Q8N6K7 520 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 ZNF296Q8WUU4 475 aaPredicted RBP13.61□□□□□ -0.23
SNHG1-221ENST00000544983 COA7Q96BR5 231 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 AMNQ9BXJ7 453 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 RNF26Q9BY78 433 aaPredicted RBP13.61□□□□□ -0.23
SNHG1-221ENST00000544983 VAT1LQ9HCJ6 419 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 CCPG1Q9ULG6 757 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 IVNS1ABPQ9Y6Y0 642 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 ZNF536O15090 1300 aa13.61□□□□□ -0.23
SNHG1-221ENST00000544983 PLEKHA8P1O95397 391 aa13.6□□□□□ -0.23
SNHG1-221ENST00000544983 PRMT2P55345 433 aa13.6□□□□□ -0.23
SNHG1-221ENST00000544983 CCT2P78371 535 aaKnown RBP13.6□□□□□ -0.23
SNHG1-221ENST00000544983 NTRK3Q16288 839 aa13.6□□□□□ -0.23
SNHG1-221ENST00000544983 ME3Q16798 604 aa13.6□□□□□ -0.23
SNHG1-221ENST00000544983 QRICH1Q2TAL8 776 aa13.6□□□□□ -0.23
SNHG1-221ENST00000544983 RAB11FIP4Q86YS3 637 aa13.6□□□□□ -0.23
SNHG1-221ENST00000544983 RGS22Q8NE09 1264 aa13.6□□□□□ -0.23
SNHG1-221ENST00000544983 GTF3C6Q969F1 213 aa13.6□□□□□ -0.23
SNHG1-221ENST00000544983 CWC22Q9HCG8 908 aaKnown RBP13.6□□□□□ -0.23
SNHG1-221ENST00000544983 RAVER2Q9HCJ3 691 aaKnown RBP13.6□□□□□ -0.23
SNHG1-221ENST00000544983 BAZ2BQ9UIF8 2168 aaKnown RBP13.6□□□□□ -0.23
SNHG1-221ENST00000544983 MRPL11Q9Y3B7 192 aaKnown RBP13.6□□□□□ -0.23
SNHG1-221ENST00000544983 ABCB11O95342 1321 aa13.6□□□□□ -0.23
SNHG1-221ENST00000544983 SLC15A5A6NIM6 579 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 PRPF3O43395 683 aaKnown RBP13.59□□□□□ -0.23
SNHG1-221ENST00000544983 FMNL1O95466 1100 aaPredicted RBP13.59□□□□□ -0.23
SNHG1-221ENST00000544983 FCER1AP12319 257 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 ERCC3P19447 782 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 PSMC4P43686 418 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 SCRN1Q12765 414 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 STK3Q13188 491 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 CCDC174Q6PII3 467 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 PLEKHH3Q7Z736 793 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 NBPF11Q86T75 865 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 NCAPG2Q86XI2 1143 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 SOCS4Q8WXH5 440 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 PIGSQ96S52 555 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 LLPHQ9BRT6 129 aaKnown RBP13.59□□□□□ -0.23
SNHG1-221ENST00000544983 CPVLQ9H3G5 476 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 ACAD9Q9H845 621 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 SLC5A4Q9NY91 659 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 MAP3K20Q9NYL2 800 aaKnown RBP13.59□□□□□ -0.23
SNHG1-221ENST00000544983 PCDHA1Q9Y5I3 950 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 COL11A1P12107 1806 aaPredicted RBP13.59□□□□□ -0.23
SNHG1-221ENST00000544983 CNTNAP5Q8WYK1 1306 aa13.59□□□□□ -0.23
SNHG1-221ENST00000544983 TNPO2O14787 897 aaKnown RBP13.58□□□□□ -0.24
SNHG1-221ENST00000544983 LBX1P52954 281 aa13.58□□□□□ -0.24
SNHG1-221ENST00000544983 SSRP1Q08945 709 aaKnown RBP13.58□□□□□ -0.24
SNHG1-221ENST00000544983 KCTD2Q14681 263 aa13.58□□□□□ -0.24
SNHG1-221ENST00000544983 PKN2Q16513 984 aaKnown RBP13.58□□□□□ -0.24
SNHG1-221ENST00000544983 SLC35G1Q2M3R5 365 aa13.58□□□□□ -0.24
SNHG1-221ENST00000544983 GPR142Q7Z601 462 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms