RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 GPLD1P80108 840 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 FAAP100Q0VG06 881 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 MMRN1Q13201 1228 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 UBAP2LQ14157 1087 aaKnown RBP7.89□□□□□ -1.15
CPSF7-222ENST00000544585 RASA3Q14644 834 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 CC2D1BQ5T0F9 858 aaKnown RBP7.89□□□□□ -1.15
CPSF7-222ENST00000544585 BNC2Q6ZN30 1099 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-222ENST00000544585 PPP1R42Q7Z4L9 355 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 SP8Q8IXZ3 490 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 RTFDC1Q9BY42 306 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-222ENST00000544585 LRRC3Q9BY71 257 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 RASSF4Q9H2L5 321 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 IGFLR1Q9H665 355 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 SAGE1Q9NXZ1 904 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 ATP6V0A2Q9Y487 856 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 ADAMTSL1Q8N6G6 1762 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 NPC1L1Q9UHC9 1359 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 J3QW42 95 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 TCERG1O14776 1098 aaKnown RBP7.88□□□□□ -1.15
CPSF7-222ENST00000544585 BPNT1O95861 308 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 PRKAR2BP31323 418 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 GMPSP49915 693 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-222ENST00000544585 HUNKP57058 714 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 MPP2Q14168 576 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 PCSK7Q16549 785 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 SLC10A5Q5PT55 438 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 RGMBQ6NW40 437 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 KIF6Q6ZMV9 814 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 HFE2Q6ZVN8 426 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 C2orf69Q8N8R5 385 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 FBXO27Q8NI29 283 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 TRPM4Q8TD43 1214 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 PNISRQ8TF01 805 aaKnown RBP7.88□□□□□ -1.15
CPSF7-222ENST00000544585 DPF2Q92785 391 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 ABHD17AQ96GS6 310 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 CFAP53Q96M91 514 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 GLIS2Q9BZE0 524 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-222ENST00000544585 CLEC4MQ9H2X3 399 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-222ENST00000544585 ACTR10Q9NZ32 417 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 CNOT7Q9UIV1 285 aaKnown RBP7.88□□□□□ -1.15
CPSF7-222ENST00000544585 CYP8B1Q9UNU6 501 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 PCDHB5Q9Y5E4 795 aa7.88□□□□□ -1.15
CPSF7-222ENST00000544585 MAP3K15Q6ZN16 1313 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 FAM221BA6H8Z2 402 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 AXIN1O15169 862 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 SMNDC1O75940 238 aaKnown RBP eCLIP7.87□□□□□ -1.15
CPSF7-222ENST00000544585 SMCPP49901 116 aaPredicted RBP7.87□□□□□ -1.15
CPSF7-222ENST00000544585 ATP11AP98196 1134 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 PTSQ03393 145 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 LRRC14Q15048 493 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 PKN2Q16513 984 aaKnown RBP7.87□□□□□ -1.15
CPSF7-222ENST00000544585 DBN1Q16643 649 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 AOC3Q16853 763 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 PARP10Q53GL7 1025 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 SUSD4Q5VX71 490 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 MCM10Q7L590 875 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 TRIM22Q8IYM9 498 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 ZNF34Q8IZ26 560 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 NGEFQ8N5V2 710 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 OR6P1Q8NGX9 317 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 BSNDQ8WZ55 320 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 KCNB2Q92953 911 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 GPATCH3Q96I76 525 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 CCDC113Q9H0I3 377 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 MUC3BQ9H195 1237 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 NDFIP2Q9NV92 336 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 ATXN7L1Q9ULK2 861 aaPredicted RBP7.87□□□□□ -1.15
CPSF7-222ENST00000544585 PHF24Q9UPV7 400 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 RRP7AQ9Y3A4 280 aaKnown RBP7.87□□□□□ -1.15
CPSF7-222ENST00000544585 UBR2Q8IWV8 1755 aa7.87□□□□□ -1.15
CPSF7-222ENST00000544585 SNED1Q8TER0 1413 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 CASP8AP2Q9UKL3 1982 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 SLC35F4A4IF30 521 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 IMPDH2P12268 514 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 NME2P22392 152 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 GIPRP48546 466 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 ANAPC15P60006 121 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 KIF23Q02241 960 aaPredicted RBP7.86□□□□□ -1.15
CPSF7-222ENST00000544585 TBC1D8BQ0IIM8 1120 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 KIAA2012Q0VF49 1180 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 IFRD2Q12894 506 aaPredicted RBP7.86□□□□□ -1.15
CPSF7-222ENST00000544585 CEP135Q66GS9 1140 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 DPP8Q6V1X1 898 aaPredicted RBP7.86□□□□□ -1.15
CPSF7-222ENST00000544585 DCPSQ96C86 337 aaKnown RBP7.86□□□□□ -1.15
CPSF7-222ENST00000544585 UTP14AQ9BVJ6 771 aaKnown RBP7.86□□□□□ -1.15
CPSF7-222ENST00000544585 SLKQ9H2G2 1235 aaPredicted RBP7.86□□□□□ -1.15
CPSF7-222ENST00000544585 RNF186Q9NXI6 227 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 PRR12Q9ULL5 1215 aa7.86□□□□□ -1.15
CPSF7-222ENST00000544585 COL11A2P13942 1736 aaPredicted RBP7.86□□□□□ -1.15
CPSF7-222ENST00000544585 IBTKQ9P2D0 1353 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-222ENST00000544585 PDE4DIPQ5VU43 2346 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 ARFGEF2Q9Y6D5 1785 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 FAM221AA4D161 298 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 ZBTB42B2RXF5 422 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 RAD17O75943 681 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 NEFMP07197 916 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 U2AF1L5P0DN76 240 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-222ENST00000544585 EIF2AK2P19525 551 aaKnown RBP7.85□□□□□ -1.15
CPSF7-222ENST00000544585 GPTP24298 496 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 U2AF1Q01081 240 aaKnown RBP eCLIP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms