RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SPATC1LQ9H0A9 340 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 NCOA5Q9HCD5 579 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CWC22Q9HCG8 908 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ZNF214Q9UL59 606 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 NID2Q14112 1375 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CPLX1O14810 134 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 FKTNO75072 461 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SMARCA1P28370 1054 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 STAT3P40763 770 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CTCFP49711 727 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 OAZ1P54368 228 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 KIF22Q14807 665 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ME3Q16798 604 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 WDR78Q5VTH9 848 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SNRNP48Q6IEG0 339 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ZNF296Q8WUU4 475 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 RRP36Q96EU6 259 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 PIGSQ96S52 555 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 TEX13BQ9BXU2 312 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 RIOX1Q9H6W3 641 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 FAM217BQ9NTX9 383 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CCPG1Q9ULG6 757 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 MGAMO43451 1857 aa16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 PFKFB2O60825 505 aa16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 LARGE1O95461 756 aa16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SCRN1Q12765 414 aa16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SLC35G1Q2M3R5 365 aa16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 NOM1Q5C9Z4 860 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CPLX2Q6PUV4 134 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 NCAPG2Q86XI2 1143 aa16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ZSCAN31Q96LW9 406 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 AGBL1Q96MI9 1066 aa16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 MOV10L1Q9BXT6 1211 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SEC63Q9UGP8 760 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ATP2A1O14983 1001 aa16.78■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ZBTB5O15062 677 aa16.78■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ICAM1P05362 532 aa16.78■□□□□ 0.28
TNFRSF1A-216ENST00000543995 HSPA8P11142 646 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-216ENST00000543995 MCM2P49736 904 aa16.78■□□□□ 0.28
TNFRSF1A-216ENST00000543995 LACTBP83111 547 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-216ENST00000543995 QRICH1Q2TAL8 776 aa16.78■□□□□ 0.28
TNFRSF1A-216ENST00000543995 RIOX2Q8IUF8 465 aa16.78■□□□□ 0.28
TNFRSF1A-216ENST00000543995 NECAB1Q8N987 351 aa16.78■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
TNFRSF1A-216ENST00000543995 PORCNQ9H237 461 aa16.78■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ZNF536O15090 1300 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CNTNAP5Q8WYK1 1306 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CD2BP2O95400 341 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SLC25A27O95847 323 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ALAS1P13196 640 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 MAPK4P31152 587 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 LBX1P52954 281 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 FCGRTP55899 365 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 USH1GQ495M9 461 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CD99L2Q8TCZ2 262 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 GTF3C6Q969F1 213 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 MTMR8Q96EF0 704 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 EFCC1Q9HA90 598 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 HOMER2Q9NSB8 354 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 PNMA2Q9UL42 364 aa16.77■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CASP8AP2Q9UKL3 1982 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 ZSWIM8A7E2V4 1837 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 PNMA6FA0A0J9YX94 578 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 hCG_1642624A0A1W2PR95 340 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 CDKL5O76039 1030 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 FMNL1O95466 1100 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 ERCC3P19447 782 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 COPB2P35606 906 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 AKAP17AQ02040 695 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 FBXO11Q86XK2 927 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 SHCBP1Q8NEM2 672 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 PHKBQ93100 1093 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 AMNQ9BXJ7 453 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 MROH8Q9H579 483 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 SH2B1Q9NRF2 756 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 RIPK3Q9Y572 518 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 V9GY48 417 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 SMCHD1A6NHR9 2005 aa16.76■□□□□ 0.27
TNFRSF1A-216ENST00000543995 TNPO2O14787 897 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 PPFIA3O75145 1194 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 IFNAR1P17181 557 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 TAL1P17542 331 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 PSMC4P43686 418 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 FUT2Q10981 343 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 TRIM22Q8IYM9 498 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 TRERF1Q96PN7 1200 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 SLC26A6Q9BXS9 759 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 ARHGAP39Q9C0H5 1083 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 IVNS1ABPQ9Y6Y0 642 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 SSRP1Q08945 709 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 TRAF1Q13077 416 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 ARHGEF6Q15052 776 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 NTRK3Q16288 839 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 TKFCQ3LXA3 575 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 GPR142Q7Z601 462 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 COA7Q96BR5 231 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 RNF146Q9NTX7 359 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 PCDHA1Q9Y5I3 950 aa16.75■□□□□ 0.27
TNFRSF1A-216ENST00000543995 PLXNB2O15031 1838 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms