RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 FAM13BQ9NYF5 915 aa22.63■■□□□ 1.21
COPS7A-218ENST00000543939 ADCY7P51828 1080 aa22.62■■□□□ 1.21
COPS7A-218ENST00000543939 INF2Q27J81 1249 aa22.62■■□□□ 1.21
COPS7A-218ENST00000543939 QRICH1Q2TAL8 776 aa22.62■■□□□ 1.21
COPS7A-218ENST00000543939 UVSSAQ2YD98 709 aa22.62■■□□□ 1.21
COPS7A-218ENST00000543939 C4orf32Q8N8J7 132 aa22.62■■□□□ 1.21
COPS7A-218ENST00000543939 ASNSP08243 561 aa22.62■■□□□ 1.21
COPS7A-218ENST00000543939 NONOQ15233 471 aaKnown RBP eCLIP22.62■■□□□ 1.21
COPS7A-218ENST00000543939 REXO1Q8N1G1 1221 aaKnown RBP22.62■■□□□ 1.21
COPS7A-218ENST00000543939 DEFB129Q9H1M3 183 aa22.62■■□□□ 1.21
COPS7A-218ENST00000543939 GOPCQ9HD26 462 aa22.62■■□□□ 1.21
COPS7A-218ENST00000543939 RIC8AQ9NPQ8 531 aa22.62■■□□□ 1.21
COPS7A-218ENST00000543939 TMEM232C9JQI7 657 aa22.61■■□□□ 1.21
COPS7A-218ENST00000543939 CDC37Q16543 378 aaPredicted RBP22.61■■□□□ 1.21
COPS7A-218ENST00000543939 KIAA1755Q5JYT7 1200 aa22.61■■□□□ 1.21
COPS7A-218ENST00000543939 SYDE2Q5VT97 1194 aa22.61■■□□□ 1.21
COPS7A-218ENST00000543939 TRPM4Q8TD43 1214 aa22.61■■□□□ 1.21
COPS7A-218ENST00000543939 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.61■■□□□ 1.21
COPS7A-218ENST00000543939 BIN2Q9UBW5 565 aaPredicted RBP22.61■■□□□ 1.21
COPS7A-218ENST00000543939 ARL6IP4Q66PJ3 421 aaKnown RBP22.6■■□□□ 1.21
COPS7A-218ENST00000543939 ANO6Q4KMQ2 910 aa22.6■■□□□ 1.21
COPS7A-218ENST00000543939 JAKMIP3Q5VZ66 844 aa22.6■■□□□ 1.21
COPS7A-218ENST00000543939 USP49Q70CQ1 688 aa22.6■■□□□ 1.21
COPS7A-218ENST00000543939 SPICE1Q8N0Z3 855 aa22.6■■□□□ 1.21
COPS7A-218ENST00000543939 ANP32BQ92688 251 aaKnown RBP22.6■■□□□ 1.21
COPS7A-218ENST00000543939 SH2D4AQ9H788 454 aa22.6■■□□□ 1.21
COPS7A-218ENST00000543939 VCPKMTQ9H867 229 aa22.6■■□□□ 1.21
COPS7A-218ENST00000543939 KIAA1468Q9P260 1216 aa22.6■■□□□ 1.21
COPS7A-218ENST00000543939 LONRF3Q496Y0 759 aa22.59■■□□□ 1.21
COPS7A-218ENST00000543939 ANGEL2Q5VTE6 544 aaKnown RBP22.59■■□□□ 1.21
COPS7A-218ENST00000543939 KRBA2Q6ZNG9 492 aa22.59■■□□□ 1.21
COPS7A-218ENST00000543939 APOBEC3FQ8IUX4 373 aaKnown RBP22.59■■□□□ 1.21
COPS7A-218ENST00000543939 ELOA2Q8IYF1 753 aaPredicted RBP22.59■■□□□ 1.21
COPS7A-218ENST00000543939 FAM200AQ8TCP9 573 aa22.59■■□□□ 1.21
COPS7A-218ENST00000543939 GINM1Q9NU53 330 aa22.59■■□□□ 1.21
COPS7A-218ENST00000543939 TMEM260Q9NX78 707 aa22.59■■□□□ 1.21
COPS7A-218ENST00000543939 CLK2P49760 499 aaKnown RBP22.58■■□□□ 1.21
COPS7A-218ENST00000543939 IL17AQ16552 155 aa22.58■■□□□ 1.21
COPS7A-218ENST00000543939 NBPF12Q5TAG4 269 aaPredicted RBP22.58■■□□□ 1.21
COPS7A-218ENST00000543939 NEK8Q86SG6 692 aa22.58■■□□□ 1.21
COPS7A-218ENST00000543939 ERCC4Q92889 916 aaPredicted RBP22.58■■□□□ 1.21
COPS7A-218ENST00000543939 VWA3AA6NCI4 1184 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 YBX3P16989 372 aaKnown RBP eCLIP22.57■■□□□ 1.2
COPS7A-218ENST00000543939 EPS15P42566 896 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 MRPL12P52815 198 aaKnown RBP22.57■■□□□ 1.2
COPS7A-218ENST00000543939 STX1AQ16623 288 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 TBCKQ8TEA7 893 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 CUL5Q93034 780 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 GLIS2Q9BZE0 524 aaPredicted RBP22.57■■□□□ 1.2
COPS7A-218ENST00000543939 PCDHA1Q9Y5I3 950 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 CTNND1O60716 968 aaKnown RBP22.57■■□□□ 1.2
COPS7A-218ENST00000543939 CAVIN2O95810 425 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 CCDC173Q0VFZ6 552 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 IKQ13123 557 aaPredicted RBP22.57■■□□□ 1.2
COPS7A-218ENST00000543939 EPSTI1Q96J88 318 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 PPP1R9BQ96SB3 815 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 GLT8D2Q9H1C3 349 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 PRR12Q9ULL5 1215 aa22.57■■□□□ 1.2
COPS7A-218ENST00000543939 DOCK1Q14185 1865 aa22.56■■□□□ 1.2
COPS7A-218ENST00000543939 POLR2AP24928 1970 aaKnown RBP22.56■■□□□ 1.2
COPS7A-218ENST00000543939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.56■■□□□ 1.2
COPS7A-218ENST00000543939 LAD1O00515 517 aa22.56■■□□□ 1.2
COPS7A-218ENST00000543939 POLR2DO15514 142 aaKnown RBP22.56■■□□□ 1.2
COPS7A-218ENST00000543939 STAT2P52630 851 aa22.56■■□□□ 1.2
COPS7A-218ENST00000543939 HIRAP54198 1017 aaPredicted RBP22.56■■□□□ 1.2
COPS7A-218ENST00000543939 FAM83BQ5T0W9 1011 aa22.56■■□□□ 1.2
COPS7A-218ENST00000543939 CCDC84Q86UT8 332 aaPredicted RBP22.56■■□□□ 1.2
COPS7A-218ENST00000543939 CNNM3Q8NE01 707 aa22.56■■□□□ 1.2
COPS7A-218ENST00000543939 SYMPKQ92797 1274 aaKnown RBP22.56■■□□□ 1.2
COPS7A-218ENST00000543939 AMNQ9BXJ7 453 aa22.56■■□□□ 1.2
COPS7A-218ENST00000543939 DNAJC25Q9H1X3 360 aa22.56■■□□□ 1.2
COPS7A-218ENST00000543939 TMEM60Q9H2L4 133 aa22.56■■□□□ 1.2
COPS7A-218ENST00000543939 PSTPIP2Q9H939 334 aa22.56■■□□□ 1.2
COPS7A-218ENST00000543939 RNF181Q9P0P0 153 aa22.56■■□□□ 1.2
COPS7A-218ENST00000543939 MYH7BA7E2Y1 1941 aa22.55■■□□□ 1.2
COPS7A-218ENST00000543939 PLA2G6O60733 806 aa22.55■■□□□ 1.2
COPS7A-218ENST00000543939 ORC2Q13416 577 aaPredicted RBP22.55■■□□□ 1.2
COPS7A-218ENST00000543939 LETM2Q2VYF4 491 aa22.55■■□□□ 1.2
COPS7A-218ENST00000543939 DCAF15Q66K64 600 aa22.55■■□□□ 1.2
COPS7A-218ENST00000543939 ANO10Q9NW15 660 aa22.55■■□□□ 1.2
COPS7A-218ENST00000543939 DDNO94850 711 aaPredicted RBP22.54■■□□□ 1.2
COPS7A-218ENST00000543939 PRPHP41219 470 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 SNAP25P60880 206 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 UBE2SQ16763 222 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 FBXO11Q86XK2 927 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 HOOK2Q96ED9 719 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 CBX8Q9HC52 389 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 GGA3Q9NZ52 723 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 SERTAD1Q9UHV2 236 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 TUBE1Q9UJT0 475 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 A0A087X0B3 334 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 ACTN4O43707 911 aaKnown RBP22.54■■□□□ 1.2
COPS7A-218ENST00000543939 EDIL3O43854 480 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 CCNT1O60563 726 aaKnown RBP22.54■■□□□ 1.2
COPS7A-218ENST00000543939 LONP1P36776 959 aaKnown RBP22.54■■□□□ 1.2
COPS7A-218ENST00000543939 MDM2Q00987 491 aaPredicted RBP22.54■■□□□ 1.2
COPS7A-218ENST00000543939 ZNF341Q9BYN7 854 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 ZNF112Q9UJU3 913 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 PPP2R3BQ9Y5P8 575 aa22.54■■□□□ 1.2
COPS7A-218ENST00000543939 ZNF165P49910 485 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms