RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CPLX2Q6PUV4 134 aaKnown RBP7.33□□□□□ -1.24
LTBR-212ENST00000543542 BTNL9Q6UXG8 535 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 PLEKHH3Q7Z736 793 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 CMTR1Q8N1G2 835 aaKnown RBP7.33□□□□□ -1.24
LTBR-212ENST00000543542 RRP36Q96EU6 259 aaKnown RBP7.33□□□□□ -1.24
LTBR-212ENST00000543542 AGBL1Q96MI9 1066 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 TBC1D32Q96NH3 1257 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 MAP3K14Q99558 947 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 MOV10L1Q9BXT6 1211 aaKnown RBP7.33□□□□□ -1.24
LTBR-212ENST00000543542 TEX13BQ9BXU2 312 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 ARHGAP39Q9C0H5 1083 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 SLKQ9H2G2 1235 aaPredicted RBP7.33□□□□□ -1.24
LTBR-212ENST00000543542 SLC38A10Q9HBR0 1119 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 TXNRD2Q9NNW7 524 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 MORF4L1Q9UBU8 362 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 PNMA2Q9UL42 364 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 TRIM17Q9Y577 477 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 ZSWIM8A7E2V4 1837 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 PLXNB2O15031 1838 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 CNMDO75829 334 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 PLEKHA8P1O95397 391 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 ERCC3P19447 782 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 OAZ1P54368 228 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 TRAF1Q13077 416 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 KCTD2Q14681 263 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 PPP2R5BQ15173 497 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 GPR142Q7Z601 462 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 DPP9Q86TI2 863 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 FBXO11Q86XK2 927 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 RIOX2Q8IUF8 465 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 ANKRD35Q8N283 1001 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 RAET1EQ8TD07 263 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 DDX11Q96FC9 970 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 ZNF274Q96GC6 653 aaPredicted RBP7.32□□□□□ -1.24
LTBR-212ENST00000543542 TRERF1Q96PN7 1200 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 PIGSQ96S52 555 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 MMP19Q99542 508 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 PORCNQ9H237 461 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 ALDH8A1Q9H2A2 487 aaPredicted RBP7.32□□□□□ -1.24
LTBR-212ENST00000543542 RANBP17Q9H2T7 1088 aaKnown RBP7.32□□□□□ -1.24
LTBR-212ENST00000543542 MROH8Q9H579 483 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 JMJD4Q9H9V9 463 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 PRDM10Q9NQV6 1147 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 RNF146Q9NTX7 359 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 FBXO40Q9UH90 709 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 ADAMTS5Q9UNA0 930 aa7.32□□□□□ -1.24
LTBR-212ENST00000543542 PTPDC1A2A3K4 754 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 ZBTB5O15062 677 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 CDKL5O76039 1030 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 GNRH1P01148 92 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 ICAM1P05362 532 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 FCER1AP12319 257 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 CYP2B6P20813 491 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 PDIA3P30101 505 aaKnown RBP7.31□□□□□ -1.24
LTBR-212ENST00000543542 ADD1P35611 737 aaKnown RBP7.31□□□□□ -1.24
LTBR-212ENST00000543542 RCAN1P53805 252 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 QRICH1Q2TAL8 776 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 TKFCQ3LXA3 575 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 NSMFQ6X4W1 530 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 TMTC3Q6ZXV5 915 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 CTU1Q7Z7A3 348 aaKnown RBP7.31□□□□□ -1.24
LTBR-212ENST00000543542 TRIM22Q8IYM9 498 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 FBXL16Q8N461 479 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 SRBD1Q8N5C6 995 aaKnown RBP7.31□□□□□ -1.24
LTBR-212ENST00000543542 SHCBP1Q8NEM2 672 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 CHST13Q8NET6 341 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 REPS2Q8NFH8 660 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 TRIM47Q96LD4 638 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 NUDT12Q9BQG2 462 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 SPZ1Q9BXG8 430 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 AMNQ9BXJ7 453 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 SLC26A6Q9BXS9 759 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 AGXT2Q9BYV1 514 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 ACAD9Q9H845 621 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 NCOA5Q9HCD5 579 aaKnown RBP7.31□□□□□ -1.24
LTBR-212ENST00000543542 SLC5A4Q9NY91 659 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 BIN2Q9UBW5 565 aaPredicted RBP7.31□□□□□ -1.24
LTBR-212ENST00000543542 ZNF214Q9UL59 606 aaPredicted RBP7.31□□□□□ -1.24
LTBR-212ENST00000543542 TPCN1Q9ULQ1 816 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 LIMCH1Q9UPQ0 1083 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 PCDHA1Q9Y5I3 950 aa7.31□□□□□ -1.24
LTBR-212ENST00000543542 ABCB11O95342 1321 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 PNMA6FA0A0J9YX94 578 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 hCG_1642624A0A1W2PR95 340 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 SLC15A5A6NIM6 579 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 ATP2A1O14983 1001 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 STRNO43815 780 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 PPFIA3O75145 1194 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 TAL1P17542 331 aaPredicted RBP7.3□□□□□ -1.24
LTBR-212ENST00000543542 PTPREP23469 700 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 SMARCA1P28370 1054 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 CDC27P30260 824 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 RGS2P41220 211 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 PRMT2P55345 433 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 PRKCZQ05513 592 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 SSRP1Q08945 709 aaKnown RBP7.3□□□□□ -1.24
LTBR-212ENST00000543542 POTEEQ6S8J3 1075 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 OTOP1Q7RTM1 612 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 HEATR3Q7Z4Q2 680 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 NBPF11Q86T75 865 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms