RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 INTS4Q96HW7 963 aaKnown RBP26.75■■□□□ 1.87
HOMER3-205ENST00000542541 PIGSQ96S52 555 aa26.75■■□□□ 1.87
HOMER3-205ENST00000542541 ZFYVE28Q9HCC9 887 aa26.74■■□□□ 1.87
HOMER3-205ENST00000542541 PTPDC1A2A3K4 754 aa26.73■■□□□ 1.87
HOMER3-205ENST00000542541 OAZ1P54368 228 aa26.73■■□□□ 1.87
HOMER3-205ENST00000542541 PIBF1Q8WXW3 757 aa26.73■■□□□ 1.87
HOMER3-205ENST00000542541 RABGAP1Q9Y3P9 1069 aa26.73■■□□□ 1.87
HOMER3-205ENST00000542541 STK36Q9NRP7 1315 aa26.73■■□□□ 1.87
HOMER3-205ENST00000542541 DEXIO95424 95 aa26.72■■□□□ 1.87
HOMER3-205ENST00000542541 SMARCC2Q8TAQ2 1214 aa26.72■■□□□ 1.87
HOMER3-205ENST00000542541 WASF1Q92558 559 aa26.72■■□□□ 1.87
HOMER3-205ENST00000542541 ORC3Q9UBD5 711 aaPredicted RBP26.72■■□□□ 1.87
HOMER3-205ENST00000542541 CA12O43570 354 aa26.72■■□□□ 1.87
HOMER3-205ENST00000542541 QRICH1Q2TAL8 776 aa26.72■■□□□ 1.87
HOMER3-205ENST00000542541 DAXXQ9UER7 740 aaPredicted RBP26.72■■□□□ 1.87
HOMER3-205ENST00000542541 SMC3Q9UQE7 1217 aa26.72■■□□□ 1.87
HOMER3-205ENST00000542541 KIF3AQ9Y496 699 aa26.72■■□□□ 1.87
HOMER3-205ENST00000542541 ATP2A1O14983 1001 aa26.71■■□□□ 1.87
HOMER3-205ENST00000542541 PPFIA3O75145 1194 aa26.71■■□□□ 1.87
HOMER3-205ENST00000542541 SNAP25P60880 206 aa26.71■■□□□ 1.87
HOMER3-205ENST00000542541 CCDC174Q6PII3 467 aa26.71■■□□□ 1.87
HOMER3-205ENST00000542541 AMNQ9BXJ7 453 aa26.71■■□□□ 1.87
HOMER3-205ENST00000542541 JAK2O60674 1132 aa26.7■■□□□ 1.86
HOMER3-205ENST00000542541 ICAM1P05362 532 aa26.7■■□□□ 1.86
HOMER3-205ENST00000542541 FBXO11Q86XK2 927 aa26.7■■□□□ 1.86
HOMER3-205ENST00000542541 CPXCR1Q8N123 301 aa26.7■■□□□ 1.86
HOMER3-205ENST00000542541 DDX11Q96FC9 970 aa26.7■■□□□ 1.86
HOMER3-205ENST00000542541 RBPJLQ9UBG7 517 aa26.7■■□□□ 1.86
HOMER3-205ENST00000542541 hCG_1642624A0A1W2PR95 340 aa26.69■■□□□ 1.86
HOMER3-205ENST00000542541 SCG2P13521 617 aa26.69■■□□□ 1.86
HOMER3-205ENST00000542541 PFKFB3Q16875 520 aaPredicted RBP26.69■■□□□ 1.86
HOMER3-205ENST00000542541 FAM184AQ8NB25 1140 aa26.69■■□□□ 1.86
HOMER3-205ENST00000542541 REPS2Q8NFH8 660 aa26.69■■□□□ 1.86
HOMER3-205ENST00000542541 PAGR1Q9BTK6 254 aa26.69■■□□□ 1.86
HOMER3-205ENST00000542541 hCG_1984214I3L0E3 225 aa26.68■■□□□ 1.86
HOMER3-205ENST00000542541 TLR2O60603 784 aa26.68■■□□□ 1.86
HOMER3-205ENST00000542541 MAP2K1Q02750 393 aaPredicted RBP26.68■■□□□ 1.86
HOMER3-205ENST00000542541 TMEM132BQ14DG7 1078 aa26.68■■□□□ 1.86
HOMER3-205ENST00000542541 ZNF713Q8N859 430 aaPredicted RBP26.68■■□□□ 1.86
HOMER3-205ENST00000542541 TEX13BQ9BXU2 312 aa26.68■■□□□ 1.86
HOMER3-205ENST00000542541 RAVER2Q9HCJ3 691 aaKnown RBP26.68■■□□□ 1.86
HOMER3-205ENST00000542541 FDPSP14324 419 aaKnown RBP26.68■■□□□ 1.86
HOMER3-205ENST00000542541 STAT3P40763 770 aa26.68■■□□□ 1.86
HOMER3-205ENST00000542541 PLS1Q14651 629 aa26.68■■□□□ 1.86
HOMER3-205ENST00000542541 GPRC5AQ8NFJ5 357 aa26.68■■□□□ 1.86
HOMER3-205ENST00000542541 BTBD7Q9P203 1132 aa26.68■■□□□ 1.86
HOMER3-205ENST00000542541 ZNF214Q9UL59 606 aaPredicted RBP26.68■■□□□ 1.86
HOMER3-205ENST00000542541 CCPG1Q9ULG6 757 aa26.68■■□□□ 1.86
HOMER3-205ENST00000542541 RLFQ13129 1914 aa26.68■■□□□ 1.86
HOMER3-205ENST00000542541 CRHR2Q13324 411 aa26.67■■□□□ 1.86
HOMER3-205ENST00000542541 PKN1Q16512 942 aa26.67■■□□□ 1.86
HOMER3-205ENST00000542541 POTEEQ6S8J3 1075 aa26.67■■□□□ 1.86
HOMER3-205ENST00000542541 HEATR3Q7Z4Q2 680 aa26.67■■□□□ 1.86
HOMER3-205ENST00000542541 ANKRD13CQ8N6S4 541 aa26.67■■□□□ 1.86
HOMER3-205ENST00000542541 MORF4L1Q9UBU8 362 aa26.67■■□□□ 1.86
HOMER3-205ENST00000542541 PCDHA1Q9Y5I3 950 aa26.67■■□□□ 1.86
HOMER3-205ENST00000542541 ZNF536O15090 1300 aa26.67■■□□□ 1.86
HOMER3-205ENST00000542541 XBP1P17861 261 aa26.66■■□□□ 1.86
HOMER3-205ENST00000542541 CCNA1P78396 465 aa26.66■■□□□ 1.86
HOMER3-205ENST00000542541 AGBL1Q96MI9 1066 aa26.66■■□□□ 1.86
HOMER3-205ENST00000542541 CFHR5Q9BXR6 569 aa26.66■■□□□ 1.86
HOMER3-205ENST00000542541 SPATC1LQ9H0A9 340 aa26.66■■□□□ 1.86
HOMER3-205ENST00000542541 TXNRD2Q9NNW7 524 aa26.66■■□□□ 1.86
HOMER3-205ENST00000542541 RNF186Q9NXI6 227 aa26.66■■□□□ 1.86
HOMER3-205ENST00000542541 BAZ2BQ9UIF8 2168 aaKnown RBP26.66■■□□□ 1.86
HOMER3-205ENST00000542541 CNMDO75829 334 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 GJB2P29033 226 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 COPB2P35606 906 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 ERVK-9P63128 1117 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 ERVK-24P63145 666 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 FAM110CQ1W6H9 321 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 TKFCQ3LXA3 575 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 SNRNP48Q6IEG0 339 aaKnown RBP26.65■■□□□ 1.86
HOMER3-205ENST00000542541 CCDC12Q8WUD4 166 aaPredicted RBP26.65■■□□□ 1.86
HOMER3-205ENST00000542541 BEGAINQ9BUH8 593 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 ADGRA2Q96PE1 1338 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 PARP14Q460N5 1801 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 PPP1R11O60927 126 aaPredicted RBP26.65■■□□□ 1.86
HOMER3-205ENST00000542541 DTNBO60941 627 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 USH1GQ495M9 461 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 RIOX2Q8IUF8 465 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 FAM177A1Q8N128 213 aaPredicted RBP26.65■■□□□ 1.86
HOMER3-205ENST00000542541 ALG1Q9BT22 464 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 SH3GLB2Q9NR46 395 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 FOXD4L1Q9NU39 408 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 BARHL2Q9NY43 387 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 CPA4Q9UI42 421 aa26.65■■□□□ 1.86
HOMER3-205ENST00000542541 ABCB11O95342 1321 aa26.64■■□□□ 1.86
HOMER3-205ENST00000542541 TRPA1O75762 1119 aa26.64■■□□□ 1.85
HOMER3-205ENST00000542541 SLC25A27O95847 323 aa26.64■■□□□ 1.85
HOMER3-205ENST00000542541 SLC4A3P48751 1232 aa26.64■■□□□ 1.85
HOMER3-205ENST00000542541 C17orf99Q6UX52 265 aa26.64■■□□□ 1.85
HOMER3-205ENST00000542541 SAGE1Q9NXZ1 904 aa26.64■■□□□ 1.85
HOMER3-205ENST00000542541 MRPL11Q9Y3B7 192 aaKnown RBP26.64■■□□□ 1.85
HOMER3-205ENST00000542541 BCRP11274 1271 aa26.63■■□□□ 1.85
HOMER3-205ENST00000542541 ALAS1P13196 640 aa26.63■■□□□ 1.85
HOMER3-205ENST00000542541 WWC2Q6AWC2 1192 aa26.63■■□□□ 1.85
HOMER3-205ENST00000542541 GPKOWQ92917 476 aaPredicted RBP eCLIP26.63■■□□□ 1.85
HOMER3-205ENST00000542541 COA7Q96BR5 231 aa26.63■■□□□ 1.85
HOMER3-205ENST00000542541 NAPAP54920 295 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms