RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 MRE11P49959 708 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 NDUFA8P51970 172 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 FAM160A1Q05DH4 1040 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 IKQ13123 557 aaPredicted RBP12.6□□□□□ -0.39
SCG3-202ENST00000542355 C9orf131Q5VYM1 1079 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 CCDC84Q86UT8 332 aaPredicted RBP12.6□□□□□ -0.39
SCG3-202ENST00000542355 FAM177A1Q8N128 213 aaPredicted RBP12.6□□□□□ -0.39
SCG3-202ENST00000542355 DAGLBQ8NCG7 672 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 ENGASEQ8NFI3 743 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 TMX2Q9Y320 296 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 MRVI1Q9Y6F6 885 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 GREB1LQ9C091 1923 aaPredicted RBP12.6□□□□□ -0.39
SCG3-202ENST00000542355 CCDC194A0A1B0GVG4 234 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 TMEM232C9JQI7 657 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 ZBTB5O15062 677 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 XRCC6P12956 609 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCG3-202ENST00000542355 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
SCG3-202ENST00000542355 TTC38Q5R3I4 469 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 SHC4Q6S5L8 630 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
SCG3-202ENST00000542355 RBSNQ9H1K0 784 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 GGA3Q9NZ52 723 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 SYNPO2Q9UMS6 1093 aa12.6□□□□□ -0.39
SCG3-202ENST00000542355 hCG_1984214I3L0E3 225 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 CUTAO60888 179 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 PPP1R11O60927 126 aaPredicted RBP12.59□□□□□ -0.39
SCG3-202ENST00000542355 TRAPPC10P48553 1259 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 GRIN1Q05586 938 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 KIAA1755Q5JYT7 1200 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 APOBEC3FQ8IUX4 373 aaKnown RBP12.59□□□□□ -0.39
SCG3-202ENST00000542355 CKAP2LQ8IYA6 745 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 FMR1NBQ8N0W7 255 aaPredicted RBP12.59□□□□□ -0.39
SCG3-202ENST00000542355 ZNF713Q8N859 430 aaPredicted RBP12.59□□□□□ -0.39
SCG3-202ENST00000542355 MTMR8Q96EF0 704 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 GLIS2Q9BZE0 524 aaPredicted RBP12.59□□□□□ -0.39
SCG3-202ENST00000542355 TSPY26PQ9H489 355 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 GOPCQ9HD26 462 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 MYH15Q9Y2K3 1946 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 KINO60870 393 aaKnown RBP12.59□□□□□ -0.39
SCG3-202ENST00000542355 PFKFB1P16118 471 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 PTPREP23469 700 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 PDE4DQ08499 809 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 SPECC1Q5M775 1068 aa12.59□□□□□ -0.39
SCG3-202ENST00000542355 BIN2Q9UBW5 565 aaPredicted RBP12.59□□□□□ -0.39
SCG3-202ENST00000542355 FBXO2Q9UK22 296 aaPredicted RBP12.59□□□□□ -0.39
SCG3-202ENST00000542355 MYH6P13533 1939 aa12.58□□□□□ -0.39
SCG3-202ENST00000542355 LMOD1P29536 600 aaPredicted RBP12.58□□□□□ -0.4
SCG3-202ENST00000542355 MCM7P33993 719 aa12.58□□□□□ -0.4
SCG3-202ENST00000542355 SNAP25P60880 206 aa12.58□□□□□ -0.4
SCG3-202ENST00000542355 CDC37Q16543 378 aaPredicted RBP12.58□□□□□ -0.4
SCG3-202ENST00000542355 QRICH1Q2TAL8 776 aa12.58□□□□□ -0.4
SCG3-202ENST00000542355 SRPRBQ9Y5M8 271 aaKnown RBP12.58□□□□□ -0.4
SCG3-202ENST00000542355 ESYT2A0FGR8 921 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 CTNND1O60716 968 aaKnown RBP12.57□□□□□ -0.4
SCG3-202ENST00000542355 ZNF202O95125 648 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 GPR162Q16538 588 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 INF2Q27J81 1249 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 SYDE2Q5VT97 1194 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 JAKMIP3Q5VZ66 844 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 SH2D4AQ9H788 454 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 VCPKMTQ9H867 229 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 FZD1Q9UP38 647 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.57□□□□□ -0.4
SCG3-202ENST00000542355 BMP15O95972 392 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 INPP5BP32019 993 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 ADCY7P51828 1080 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 PTGDRQ13258 359 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 FAM83BQ5T0W9 1011 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 RESP18Q5W5W9 173 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 DCAF15Q66K64 600 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 REXO1Q8N1G1 1221 aaKnown RBP12.57□□□□□ -0.4
SCG3-202ENST00000542355 RNF214Q8ND24 703 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 SDF4Q9BRK5 362 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 ZNF341Q9BYN7 854 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 ADARB2Q9NS39 739 aaKnown RBP12.57□□□□□ -0.4
SCG3-202ENST00000542355 TMEM260Q9NX78 707 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 PCDHA1Q9Y5I3 950 aa12.57□□□□□ -0.4
SCG3-202ENST00000542355 SYKP43405 635 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 STAT2P52630 851 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 NONOQ15233 471 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCG3-202ENST00000542355 DPY19L2Q6NUT2 758 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 BTNL9Q6UXG8 535 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 KRT25Q7Z3Z0 450 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 FEZ1Q99689 392 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 FUCA2Q9BTY2 467 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 CSRNP2Q9H175 543 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 HPSEQ9Y251 543 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 STK24Q9Y6E0 443 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 BRD2P25440 801 aaKnown RBP12.56□□□□□ -0.4
SCG3-202ENST00000542355 PPP1R18Q6NYC8 613 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 RBM43Q6ZSC3 357 aaKnown RBP12.56□□□□□ -0.4
SCG3-202ENST00000542355 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
SCG3-202ENST00000542355 HOOK2Q96ED9 719 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 PSTPIP2Q9H939 334 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 RIC8AQ9NPQ8 531 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 PRR12Q9ULL5 1215 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 MYH4Q9Y623 1939 aa12.56□□□□□ -0.4
SCG3-202ENST00000542355 TRIM66O15016 1216 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms