RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ZNF112Q9UJU3 913 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 NOL7Q9UMY1 257 aaKnown RBP9.94□□□□□ -0.82
THBS3-210ENST00000541576 MARCKSP29966 332 aaPredicted RBP9.93□□□□□ -0.82
THBS3-210ENST00000541576 GNA11P29992 359 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 ZYXQ15942 572 aaKnown RBP9.93□□□□□ -0.82
THBS3-210ENST00000541576 KIAA1755Q5JYT7 1200 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 USP50Q70EL3 339 aaPredicted RBP9.93□□□□□ -0.82
THBS3-210ENST00000541576 SMCO2A6NFE2 343 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 ATP2B1P20020 1258 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 SYDE2Q5VT97 1194 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 BTNL9Q6UXG8 535 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 PIK3AP1Q6ZUJ8 805 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 SCYL3Q8IZE3 742 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 JMYQ8N9B5 988 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 COA7Q96BR5 231 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 GOLPH3LQ9H4A5 285 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 PCDHB6Q9Y5E3 794 aa9.93□□□□□ -0.82
THBS3-210ENST00000541576 ESYT2A0FGR8 921 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 WNT7AO00755 349 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 NR1I2O75469 434 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 STAT2P52630 851 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 CDC37Q16543 378 aaPredicted RBP9.92□□□□□ -0.82
THBS3-210ENST00000541576 FAM83BQ5T0W9 1011 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 AXDND1Q5T1B0 1012 aaPredicted RBP9.92□□□□□ -0.82
THBS3-210ENST00000541576 PPP1R18Q6NYC8 613 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 CCAR1Q8IX12 1150 aaKnown RBP9.92□□□□□ -0.82
THBS3-210ENST00000541576 PICK1Q9NRD5 415 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 DACT1Q9NYF0 836 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 FZD1Q9UP38 647 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 SSC5DA1L4H1 1573 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 CCDC194A0A1B0GVG4 234 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 IQCA1LA6NCM1 817 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 TRIM75PA6NK02 468 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 M0R2N6 131 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 PPP1R11O60927 126 aaPredicted RBP9.92□□□□□ -0.82
THBS3-210ENST00000541576 QRICH1Q2TAL8 776 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 CCDC183Q5T5S1 534 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 KRT26Q7Z3Y9 468 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 RASGRP4Q8TDF6 673 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 ZC3H15Q8WU90 426 aaKnown RBP9.92□□□□□ -0.82
THBS3-210ENST00000541576 ZKSCAN4Q969J2 545 aaPredicted RBP9.92□□□□□ -0.82
THBS3-210ENST00000541576 KLRG1Q96E93 195 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 PCDHA6Q9UN73 950 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 PCDHA8Q9Y5H6 950 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 ADM5C9JUS6 153 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 PPP6R2O75170 966 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 TRAPPC10P48553 1259 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 ADALQ6DHV7 355 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 KIAA1683Q9H0B3 1180 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 CEP131Q9UPN4 1083 aa9.92□□□□□ -0.82
THBS3-210ENST00000541576 DOCK1Q14185 1865 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 ADCY7P51828 1080 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 PRKG1Q13976 671 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.91□□□□□ -0.82
THBS3-210ENST00000541576 A0A1W2PQ27 194 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 A0A1W2PQ64 194 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 A0A1W2PQD8 194 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 SNW1Q13573 536 aaKnown RBP9.91□□□□□ -0.82
THBS3-210ENST00000541576 TTC38Q5R3I4 469 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 DLK2Q6UY11 383 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 REXO1Q8N1G1 1221 aaKnown RBP9.91□□□□□ -0.82
THBS3-210ENST00000541576 FSIP1Q8NA03 581 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 ENGASEQ8NFI3 743 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 CHURC1Q8WUH1 139 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 LPAR1Q92633 364 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 TAF1DQ9H5J8 278 aaPredicted RBP9.91□□□□□ -0.82
THBS3-210ENST00000541576 AS3MTQ9HBK9 375 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 PRR12Q9ULL5 1215 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 MRVI1Q9Y6F6 885 aa9.91□□□□□ -0.82
THBS3-210ENST00000541576 PTPRAP18433 802 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 CAMK4Q16566 473 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 EAPPQ56P03 285 aaPredicted RBP9.9□□□□□ -0.82
THBS3-210ENST00000541576 CCDC73Q6ZRK6 1079 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 KRT25Q7Z3Z0 450 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 CLIC6Q96NY7 704 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 AMNQ9BXJ7 453 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 PCDHA1Q9Y5I3 950 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 SCN4AP35499 1836 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 A0A1B0GVL5 298 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 VGLL3A8MV65 326 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 SOCS7O14512 581 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 PPP1R12BO60237 982 aaPredicted RBP9.9□□□□□ -0.82
THBS3-210ENST00000541576 PLA2G6O60733 806 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 BMP15O95972 392 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 USP14P54578 494 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 SPP2Q13103 211 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 LRSAM1Q6UWE0 723 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 FAM160B2Q86V87 743 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.9□□□□□ -0.82
THBS3-210ENST00000541576 BBXQ8WY36 941 aaPredicted RBP9.9□□□□□ -0.82
THBS3-210ENST00000541576 MRPS27Q92552 414 aaKnown RBP9.9□□□□□ -0.82
THBS3-210ENST00000541576 WDR18Q9BV38 432 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 FEM1BQ9UK73 627 aa9.9□□□□□ -0.82
THBS3-210ENST00000541576 WDR46O15213 610 aaKnown RBP9.9□□□□□ -0.83
THBS3-210ENST00000541576 USP2O75604 605 aaPredicted RBP9.9□□□□□ -0.83
THBS3-210ENST00000541576 SNAP25P60880 206 aa9.9□□□□□ -0.83
THBS3-210ENST00000541576 GRIN1Q05586 938 aa9.9□□□□□ -0.83
THBS3-210ENST00000541576 MTMR2Q13614 643 aa9.9□□□□□ -0.83
THBS3-210ENST00000541576 ZNF174Q15697 407 aa9.9□□□□□ -0.83
THBS3-210ENST00000541576 NOL9Q5SY16 702 aaKnown RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms