RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 C11orf57Q6ZUT1 292 aaPredicted RBP14.02□□□□□ -0.16
AP003559.1-201ENST00000540906 GMCL1Q96IK5 515 aa14.02□□□□□ -0.16
AP003559.1-201ENST00000540906 EPSTI1Q96J88 318 aa14.02□□□□□ -0.16
AP003559.1-201ENST00000540906 CCDC194A0A1B0GVG4 234 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 ESYT2A0FGR8 921 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 SMCHD1A6NHR9 2005 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 ZBTB5O15062 677 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 LMNB1P20700 586 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 EPS15P42566 896 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 ZYXQ15942 572 aaKnown RBP14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 CDC37Q16543 378 aaPredicted RBP14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 UBE2SQ16763 222 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 NBPF12Q5TAG4 269 aaPredicted RBP14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 DNAJC25Q9H1X3 360 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 KCNH3Q9ULD8 1083 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 MORC2Q9Y6X9 1032 aaPredicted RBP14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 TMEM232C9JQI7 657 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 TRAPPC10P48553 1259 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 DGKZQ13574 1117 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 GALNT17Q6IS24 598 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 C6orf50Q9HD87 102 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 GPRC5DQ9NZD1 345 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 CEP131Q9UPN4 1083 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 TMX2Q9Y320 296 aa14.01□□□□□ -0.17
AP003559.1-201ENST00000540906 VWA3AA6NCI4 1184 aa14□□□□□ -0.17
AP003559.1-201ENST00000540906 CTAGE5O15320 804 aa14□□□□□ -0.17
AP003559.1-201ENST00000540906 BMP3P12645 472 aa14□□□□□ -0.17
AP003559.1-201ENST00000540906 TNNI2P48788 182 aa14□□□□□ -0.17
AP003559.1-201ENST00000540906 ADCY7P51828 1080 aa14□□□□□ -0.17
AP003559.1-201ENST00000540906 ANGEL2Q5VTE6 544 aaKnown RBP14□□□□□ -0.17
AP003559.1-201ENST00000540906 DLK2Q6UY11 383 aa14□□□□□ -0.17
AP003559.1-201ENST00000540906 GRAMD1CQ8IYS0 662 aa14□□□□□ -0.17
AP003559.1-201ENST00000540906 PDILTQ8N807 584 aa14□□□□□ -0.17
AP003559.1-201ENST00000540906 ZNF579Q8NAF0 562 aaKnown RBP14□□□□□ -0.17
AP003559.1-201ENST00000540906 SDF4Q9BRK5 362 aa14□□□□□ -0.17
AP003559.1-201ENST00000540906 DEFB129Q9H1M3 183 aa14□□□□□ -0.17
AP003559.1-201ENST00000540906 CBX8Q9HC52 389 aa14□□□□□ -0.17
AP003559.1-201ENST00000540906 DDNO94850 711 aaPredicted RBP13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 PRR29P0C7W0 189 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 CLK2P49760 499 aaKnown RBP13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 PNOCQ13519 176 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 FAM83BQ5T0W9 1011 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 SYDE2Q5VT97 1194 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 SASS6Q6UVJ0 657 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 KRBA2Q6ZNG9 492 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 LUZP1Q86V48 1076 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 SYMPKQ92797 1274 aaKnown RBP13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 P2RX7Q99572 595 aaKnown RBP13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 ARHGEF10LQ9HCE6 1279 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 SERTAD1Q9UHV2 236 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 hCG_1984214I3L0E3 225 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 BIN1O00499 593 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 POLR2DO15514 142 aaKnown RBP13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 GNA11P29992 359 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 INPP5BP32019 993 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 BTNL9Q6UXG8 535 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 KRT25Q7Z3Z0 450 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 FAM177A1Q8N128 213 aaPredicted RBP13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 REXO1Q8N1G1 1221 aaKnown RBP13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 ZNF713Q8N859 430 aaPredicted RBP13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 TBCKQ8TEA7 893 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 CCDC12Q8WUD4 166 aaPredicted RBP13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 TIGD1Q96MW7 591 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 RIC8AQ9NPQ8 531 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 KIAA1468Q9P260 1216 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 SSC5DA1L4H1 1573 aa13.99□□□□□ -0.17
AP003559.1-201ENST00000540906 POLR2AP24928 1970 aaKnown RBP13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 ACTN4O43707 911 aaKnown RBP13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 CDC25AP30304 524 aa13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 NONOQ15233 471 aaKnown RBP eCLIP13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 LETM2Q2VYF4 491 aa13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 GPC2Q8N158 579 aa13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 PPP1R9BQ96SB3 815 aa13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 GGA3Q9NZ52 723 aa13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 USP25Q9UHP3 1055 aa13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 PRR12Q9ULL5 1215 aa13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 MYH7BA7E2Y1 1941 aa13.98□□□□□ -0.17
AP003559.1-201ENST00000540906 PP2D1A8MPX8 630 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 USP17L15C9J2P7 530 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 USP17L13C9JLJ4 530 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 USP17L11C9JVI0 530 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 USP17L18D6R9N7 530 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 USP17L22D6RA61 530 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 USP17L17D6RBQ6 530 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 USP17L19D6RCP7 530 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 USP17L20D6RJB6 530 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 H7C1D1 291 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 OPLAHO14841 1288 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 BMP15O95972 392 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 MMP14P50281 582 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 USP17L24Q0WX57 530 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 TNFAIP1Q13829 316 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 ISM2Q6H9L7 571 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 PPP1R18Q6NYC8 613 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 USP17L6PQ6QN14 398 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 FAM200AQ8TCP9 573 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 FERMT2Q96AC1 680 aa13.97□□□□□ -0.17
AP003559.1-201ENST00000540906 PDLIM2Q96JY6 352 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms