RNA–Protein interactions for RNA: ENST00000540503.1

PPFIBP1-212, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-212ENST00000540503 FAM177A1Q8N128 213 aaPredicted RBP11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 CMTR1Q8N1G2 835 aaKnown RBP11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 FAM43AQ8N2R8 423 aa11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 SMARCC2Q8TAQ2 1214 aa11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 CCDC12Q8WUD4 166 aaPredicted RBP11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 PHKBQ93100 1093 aa11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 ATG4CQ96DT6 458 aa11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 MTMR8Q96EF0 704 aa11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 CPVLQ9H3G5 476 aa11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 JMJD4Q9H9V9 463 aa11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 SLC38A10Q9HBR0 1119 aa11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 ZFYVE28Q9HCC9 887 aa11.92□□□□□ -0.5
PPFIBP1-212ENST00000540503 PNMA6FA0A0J9YX94 578 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 CTDNEP1O95476 244 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 SCG2P13521 617 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 HTRA3P83110 453 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 PFKFB3Q16875 520 aaPredicted RBP11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 QRICH1Q2TAL8 776 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 PPP1R18Q6NYC8 613 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 CCDC174Q6PII3 467 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 NBPF11Q86T75 865 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 FBXO11Q86XK2 927 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 CCDC148Q8NFR7 591 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 PIBF1Q8WXW3 757 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 PIGSQ96S52 555 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 P2RX7Q99572 595 aaKnown RBP11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 PTPN18Q99952 460 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 AMNQ9BXJ7 453 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 ADAMTS5Q9UNA0 930 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 RABGAP1Q9Y3P9 1069 aa11.91□□□□□ -0.5
PPFIBP1-212ENST00000540503 ABCB11O95342 1321 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 JAK2O60674 1132 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 ICAM1P05362 532 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 PDCP20941 246 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 GJB2P29033 226 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 CCNA1P78396 465 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 TRIM29Q14134 588 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 SLC35G1Q2M3R5 365 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 TKFCQ3LXA3 575 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 HEATR3Q7Z4Q2 680 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 DDX11Q96FC9 970 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 PAGR1Q9BTK6 254 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 TEX13BQ9BXU2 312 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 CCPG1Q9ULG6 757 aa11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 V9GY48 417 aaPredicted RBP11.9□□□□□ -0.5
PPFIBP1-212ENST00000540503 ATP2A1O14983 1001 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 CA12O43570 354 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 SLC25A27O95847 323 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 CYP2C8P10632 490 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 PLS1Q14651 629 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 FAM110CQ1W6H9 321 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 SNRNP48Q6IEG0 339 aaKnown RBP11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 CPXCR1Q8N123 301 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 REPS2Q8NFH8 660 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 ZIC5Q96T25 663 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 ALG1Q9BT22 464 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 GLT8D2Q9H1C3 349 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 CWC22Q9HCG8 908 aaKnown RBP11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 SH3GLB2Q9NR46 395 aa11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 MRPL11Q9Y3B7 192 aaKnown RBP11.89□□□□□ -0.51
PPFIBP1-212ENST00000540503 hCG_1642624A0A1W2PR95 340 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 PPFIA3O75145 1194 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 PDIA4P13667 645 aaKnown RBP11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 STAT3P40763 770 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 NAPAP54920 295 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 SNAP25P60880 206 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 ERVK-9P63128 1117 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 ERVK-24P63145 666 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 TMEM132BQ14DG7 1078 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 USH1GQ495M9 461 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 TEX2Q8IWB9 1127 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 RGS22Q8NE09 1264 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 GPRC5AQ8NFJ5 357 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 GPKOWQ92917 476 aaPredicted RBP eCLIP11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 C8orf76Q96K31 380 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 BEGAINQ9BUH8 593 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 SPATC1LQ9H0A9 340 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 RAVER2Q9HCJ3 691 aaKnown RBP11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 BRMS1Q9HCU9 246 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 BARHL2Q9NY43 387 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 MORF4L1Q9UBU8 362 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 FBXO40Q9UH90 709 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 ZNF214Q9UL59 606 aaPredicted RBP11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 PCDHA1Q9Y5I3 950 aa11.88□□□□□ -0.51
PPFIBP1-212ENST00000540503 ADGRA2Q96PE1 1338 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 H3BQV1 296 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 STXBP3O00186 592 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 TLR2O60603 784 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 ALAS1P13196 640 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 CALML3P27482 149 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 MAP2K1Q02750 393 aaPredicted RBP11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 CRHR2Q13324 411 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 SAFBQ15424 915 aaKnown RBP eCLIP11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 PKN1Q16512 942 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 RIOX2Q8IUF8 465 aa11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 CCAR1Q8IX12 1150 aaKnown RBP11.87□□□□□ -0.51
PPFIBP1-212ENST00000540503 ANKRD13CQ8N6S4 541 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms