RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 MSANTD4Q8NCY6 345 aa13.97□□□□□ -0.17
NEK6-213ENST00000540326 OR8K1Q8NGG5 319 aa13.97□□□□□ -0.17
NEK6-213ENST00000540326 SH3GLB2Q9NR46 395 aa13.97□□□□□ -0.17
NEK6-213ENST00000540326 THRAP3Q9Y2W1 955 aaKnown RBP13.97□□□□□ -0.17
NEK6-213ENST00000540326 LGALS16A8MUM7 142 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 HNRNPH2P55795 449 aaKnown RBP13.96□□□□□ -0.17
NEK6-213ENST00000540326 SETDB2Q96T68 719 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 PDE11AQ9HCR9 933 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 HDAC6Q9UBN7 1215 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 RAB21Q9UL25 225 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 MYO6Q9UM54 1294 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 COL22A1Q8NFW1 1626 aaPredicted RBP13.96□□□□□ -0.17
NEK6-213ENST00000540326 NUTM2BA6NNL0 878 aaPredicted RBP13.96□□□□□ -0.17
NEK6-213ENST00000540326 NUTM2EB1AL46 878 aaPredicted RBP13.96□□□□□ -0.17
NEK6-213ENST00000540326 B4DLN1 442 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 TUBB2AQ13885 445 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 GRM4Q14833 912 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 WDR59Q6PJI9 974 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 HNRNPLLQ8WVV9 542 aaKnown RBP13.96□□□□□ -0.17
NEK6-213ENST00000540326 TUBB2BQ9BVA1 445 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 ANKRD2Q9GZV1 360 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
NEK6-213ENST00000540326 MYO1AQ9UBC5 1043 aa13.96□□□□□ -0.17
NEK6-213ENST00000540326 MKRN1Q9UHC7 482 aaKnown RBP13.96□□□□□ -0.17
NEK6-213ENST00000540326 PSMA7O14818 248 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 PIP4K2BP78356 416 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 AMPD2Q01433 879 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 GRIK5Q16478 980 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 WHAMMP3Q1A5X7 153 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 PTF1AQ7RTS3 328 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 ZNF507Q8TCN5 953 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 TGFBRAP1Q8WUH2 860 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 AGPAT5Q9NUQ2 364 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 KBTBD4Q9NVX7 518 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 PDS5AQ29RF7 1337 aaKnown RBP13.95□□□□□ -0.18
NEK6-213ENST00000540326 STXBP3O00186 592 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 EEF1GP26641 437 aaKnown RBP13.95□□□□□ -0.18
NEK6-213ENST00000540326 KLK7P49862 253 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 STIM1Q13586 685 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 KCNB1Q14721 858 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 CSGALNACT2Q8N6G5 542 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 GIMAP8Q8ND71 665 aaPredicted RBP13.95□□□□□ -0.18
NEK6-213ENST00000540326 DNAJC7Q99615 494 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 BARHL2Q9NY43 387 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 CALCOCO1Q9P1Z2 691 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 MAGEC2Q9UBF1 373 aaPredicted RBP13.95□□□□□ -0.18
NEK6-213ENST00000540326 SAP30BPQ9UHR5 308 aaKnown RBP13.95□□□□□ -0.18
NEK6-213ENST00000540326 ADAM21Q9UKJ8 722 aa13.95□□□□□ -0.18
NEK6-213ENST00000540326 POTEB2H3BUK9 544 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 N4BP1O75113 896 aaKnown RBP13.94□□□□□ -0.18
NEK6-213ENST00000540326 ERLIN1O75477 346 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 RHOBTB3O94955 611 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 LDHBP07195 334 aaKnown RBP13.94□□□□□ -0.18
NEK6-213ENST00000540326 PLCG1P19174 1290 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 TXNRD1Q16881 649 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 LETM2Q2VYF4 491 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 CCDC122Q5T0U0 273 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 TTI2Q6NXR4 508 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 HDXQ7Z353 690 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 ZNF444Q8N0Y2 327 aaPredicted RBP13.94□□□□□ -0.18
NEK6-213ENST00000540326 CCDC148Q8NFR7 591 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 BBXQ8WY36 941 aaPredicted RBP13.94□□□□□ -0.18
NEK6-213ENST00000540326 TMEM47Q9BQJ4 181 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 TUBGCP2Q9BSJ2 902 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 THAP9Q9H5L6 903 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 ANKIB1Q9P2G1 1089 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 CAPN11Q9UMQ6 739 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 L1RE1Q9UN81 338 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 CCDC88AQ3V6T2 1871 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 CCNT1O60563 726 aaKnown RBP13.94□□□□□ -0.18
NEK6-213ENST00000540326 SRGAP2O75044 1071 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 TRIM21P19474 475 aaKnown RBP13.94□□□□□ -0.18
NEK6-213ENST00000540326 HERVK_113P62684 666 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 TSR1Q2NL82 804 aaKnown RBP13.94□□□□□ -0.18
NEK6-213ENST00000540326 CCDC178Q5BJE1 867 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 CCSER1Q9C0I3 900 aa13.94□□□□□ -0.18
NEK6-213ENST00000540326 ROBO1Q9Y6N7 1651 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 A0A1W2PQC6 194 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 NKRFO15226 690 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■■□□□ 11.9
NEK6-213ENST00000540326 GNAQP50148 359 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 STK4Q13043 487 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 SPTY2D1Q68D10 685 aaPredicted RBP13.93□□□□□ -0.18
NEK6-213ENST00000540326 CABP7Q86V35 215 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 MAPKAPK5Q8IW41 473 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 GPR101Q96P66 508 aaPredicted RBP13.93□□□□□ -0.18
NEK6-213ENST00000540326 DUSP9Q99956 384 aaKnown RBP13.93□□□□□ -0.18
NEK6-213ENST00000540326 NYXQ9GZU5 481 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 COL5A3P25940 1745 aaPredicted RBP13.93□□□□□ -0.18
NEK6-213ENST00000540326 SPATA31A5Q5VU36 1347 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 SPATA31A7Q8IWB4 1347 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 KLRF2D3W0D1 207 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 ATP1A1P05023 1023 aaKnown RBP13.93□□□□□ -0.18
NEK6-213ENST00000540326 FCER1AP12319 257 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 PDE4DQ08499 809 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 GPS2Q13227 327 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 PAXIP1Q6ZW49 1069 aaPredicted RBP13.93□□□□□ -0.18
NEK6-213ENST00000540326 HPS3Q969F9 1004 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 TRERF1Q96PN7 1200 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 HAUS4Q9H6D7 363 aa13.93□□□□□ -0.18
NEK6-213ENST00000540326 TCP11L1Q9NUJ3 509 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms