RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 hCG_1642624A0A1W2PR95 340 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 UBA7P41226 1012 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 CDCA7Q9BWT1 371 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-209ENST00000539584 TTYH3Q9C0H2 523 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 PODXL2Q9NZ53 605 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 CCDC194A0A1B0GVG4 234 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 MYO1CO00159 1063 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 PRLRP16471 622 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 CDC25AP30304 524 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 ORC2Q13416 577 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-209ENST00000539584 TTI2Q6NXR4 508 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 WDR59Q6PJI9 974 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 KIAA1328Q86T90 577 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 TRIM47Q96LD4 638 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 PURBQ96QR8 312 aaKnown RBP14.85□□□□□ -0.03
UBE3B-209ENST00000539584 LZTS2Q9BRK4 669 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 DCP1AQ9NPI6 582 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-209ENST00000539584 NIP7Q9Y221 180 aaKnown RBP eCLIP14.85□□□□□ -0.03
UBE3B-209ENST00000539584 GDAQ9Y2T3 454 aa14.85□□□□□ -0.03
UBE3B-209ENST00000539584 CICQ96RK0 1608 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-209ENST00000539584 M0R2N6 131 aa14.84□□□□□ -0.03
UBE3B-209ENST00000539584 DYNLL1P63167 89 aaKnown RBP14.84□□□□□ -0.03
UBE3B-209ENST00000539584 AMPD3Q01432 767 aa14.84□□□□□ -0.03
UBE3B-209ENST00000539584 NAALADL2Q58DX5 795 aa14.84□□□□□ -0.03
UBE3B-209ENST00000539584 NCAPH2Q6IBW4 605 aa14.84□□□□□ -0.03
UBE3B-209ENST00000539584 COG1Q8WTW3 980 aa14.84□□□□□ -0.03
UBE3B-209ENST00000539584 JAKMIP2Q96AA8 810 aa14.84□□□□□ -0.03
UBE3B-209ENST00000539584 NSUN4Q96CB9 384 aaKnown RBP14.84□□□□□ -0.03
UBE3B-209ENST00000539584 KAT14Q9H8E8 782 aa14.84□□□□□ -0.03
UBE3B-209ENST00000539584 BTG4Q9NY30 223 aa14.84□□□□□ -0.03
UBE3B-209ENST00000539584 TSPY2A6NKD2 308 aa14.83□□□□□ -0.03
UBE3B-209ENST00000539584 LRRIQ3A6PVS8 624 aaPredicted RBP14.83□□□□□ -0.03
UBE3B-209ENST00000539584 KLRC4O43908 158 aa14.83□□□□□ -0.03
UBE3B-209ENST00000539584 ABL1P00519 1130 aa14.83□□□□□ -0.03
UBE3B-209ENST00000539584 TRIM21P19474 475 aaKnown RBP14.83□□□□□ -0.03
UBE3B-209ENST00000539584 CCNE1P24864 410 aa14.83□□□□□ -0.03
UBE3B-209ENST00000539584 GYG1P46976 350 aa14.83□□□□□ -0.03
UBE3B-209ENST00000539584 GYS2P54840 703 aa14.83□□□□□ -0.03
UBE3B-209ENST00000539584 HERVK_113P62684 666 aa14.83□□□□□ -0.03
UBE3B-209ENST00000539584 ZNF572Q7Z3I7 529 aaPredicted RBP14.83□□□□□ -0.03
UBE3B-209ENST00000539584 FBXO33Q7Z6M2 555 aa14.83□□□□□ -0.03
UBE3B-209ENST00000539584 ZSCAN29Q8IWY8 852 aaPredicted RBP14.83□□□□□ -0.03
UBE3B-209ENST00000539584 TRIM58Q8NG06 486 aa14.83□□□□□ -0.03
UBE3B-209ENST00000539584 ERGIC2Q96RQ1 377 aa14.83□□□□□ -0.03
UBE3B-209ENST00000539584 TUBGCP2Q9BSJ2 902 aa14.83□□□□□ -0.03
UBE3B-209ENST00000539584 ABCB11O95342 1321 aa14.83□□□□□ -0.04
UBE3B-209ENST00000539584 PHLPP1O60346 1717 aa14.83□□□□□ -0.04
UBE3B-209ENST00000539584 ADAMTS2O95450 1211 aa14.83□□□□□ -0.04
UBE3B-209ENST00000539584 HNRNPH3P31942 346 aaKnown RBP14.83□□□□□ -0.04
UBE3B-209ENST00000539584 CRKLP46109 303 aaKnown RBP14.83□□□□□ -0.04
UBE3B-209ENST00000539584 KIF5AQ12840 1032 aa14.83□□□□□ -0.04
UBE3B-209ENST00000539584 ARHGAP27Q6ZUM4 889 aa14.83□□□□□ -0.04
UBE3B-209ENST00000539584 AMOTL1Q8IY63 956 aa14.83□□□□□ -0.04
UBE3B-209ENST00000539584 CSGALNACT2Q8N6G5 542 aa14.83□□□□□ -0.04
UBE3B-209ENST00000539584 RASSF8Q8NHQ8 419 aa14.83□□□□□ -0.04
UBE3B-209ENST00000539584 AFAP1L1Q8TED9 768 aa14.83□□□□□ -0.04
UBE3B-209ENST00000539584 FAM84BQ96KN1 310 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-209ENST00000539584 TCP11L1Q9NUJ3 509 aa14.83□□□□□ -0.04
UBE3B-209ENST00000539584 RRP15Q9Y3B9 282 aaKnown RBP14.83□□□□□ -0.04
UBE3B-209ENST00000539584 NUTM2BA6NNL0 878 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-209ENST00000539584 A6NNZ2 444 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 NUTM2EB1AL46 878 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-209ENST00000539584 USO1O60763 962 aaKnown RBP14.82□□□□□ -0.04
UBE3B-209ENST00000539584 TBC1D8BQ0IIM8 1120 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 TUBB8Q3ZCM7 444 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 FKBP15Q5T1M5 1219 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 P2RX5Q93086 422 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 FAM107BQ9H098 131 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 NHEJ1Q9H9Q4 299 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-209ENST00000539584 SUGCTQ9HAC7 445 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 JRKLQ9Y4A0 524 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 MYH8P13535 1937 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 COL1A1P02452 1464 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-209ENST00000539584 CYP2D7A0A087X1C5 515 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 N4BP1O75113 896 aaKnown RBP14.82□□□□□ -0.04
UBE3B-209ENST00000539584 ATP1A1P05023 1023 aaKnown RBP14.82□□□□□ -0.04
UBE3B-209ENST00000539584 VAV2P52735 878 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 SPA17Q15506 151 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 FOXR2Q6PJQ5 311 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 C7orf25Q9BPX7 421 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 CRACR2AQ9BSW2 395 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 FAM204AQ9H8W3 233 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 HPCAL4Q9UM19 191 aa14.82□□□□□ -0.04
UBE3B-209ENST00000539584 RNF40O75150 1001 aa14.81□□□□□ -0.04
UBE3B-209ENST00000539584 FGFR1OPO95684 399 aaKnown RBP14.81□□□□□ -0.04
UBE3B-209ENST00000539584 GRM4Q14833 912 aa14.81□□□□□ -0.04
UBE3B-209ENST00000539584 SPTY2D1Q68D10 685 aaPredicted RBP14.81□□□□□ -0.04
UBE3B-209ENST00000539584 RCSD1Q6JBY9 416 aa14.81□□□□□ -0.04
UBE3B-209ENST00000539584 CNNM4Q6P4Q7 775 aa14.81□□□□□ -0.04
UBE3B-209ENST00000539584 CCNI2Q6ZMN8 369 aaPredicted RBP14.81□□□□□ -0.04
UBE3B-209ENST00000539584 MMGT1Q8N4V1 131 aa14.81□□□□□ -0.04
UBE3B-209ENST00000539584 BBXQ8WY36 941 aaPredicted RBP14.81□□□□□ -0.04
UBE3B-209ENST00000539584 SECISBP2LQ93073 1101 aaKnown RBP14.81□□□□□ -0.04
UBE3B-209ENST00000539584 MMS19Q96T76 1030 aa14.81□□□□□ -0.04
UBE3B-209ENST00000539584 MINPP1Q9UNW1 487 aa14.81□□□□□ -0.04
UBE3B-209ENST00000539584 COL14A1Q05707 1796 aaKnown RBP14.81□□□□□ -0.04
UBE3B-209ENST00000539584 SCN7AQ01118 1682 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 MYH13Q9UKX3 1938 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 LAMB1P07942 1786 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 TRIM49BA6NDI0 452 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms