RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 VAT1LQ9HCJ6 419 aa19.94■□□□□ 0.78
CLN6-202ENST00000538696 HOXC10Q9NYD6 342 aa19.94■□□□□ 0.78
CLN6-202ENST00000538696 RBBP6Q7Z6E9 1792 aaKnown RBP19.93■□□□□ 0.78
CLN6-202ENST00000538696 VWA5AO00534 786 aa19.93■□□□□ 0.78
CLN6-202ENST00000538696 CNMDO75829 334 aa19.93■□□□□ 0.78
CLN6-202ENST00000538696 IFNAR1P17181 557 aa19.93■□□□□ 0.78
CLN6-202ENST00000538696 CRHR2Q13324 411 aa19.93■□□□□ 0.78
CLN6-202ENST00000538696 CDC37Q16543 378 aaPredicted RBP19.93■□□□□ 0.78
CLN6-202ENST00000538696 SMCR8Q8TEV9 937 aaPredicted RBP19.93■□□□□ 0.78
CLN6-202ENST00000538696 SLC38A10Q9HBR0 1119 aa19.93■□□□□ 0.78
CLN6-202ENST00000538696 CPLX1O14810 134 aa19.92■□□□□ 0.78
CLN6-202ENST00000538696 STX6O43752 255 aa19.92■□□□□ 0.78
CLN6-202ENST00000538696 PEX10O60683 326 aa19.92■□□□□ 0.78
CLN6-202ENST00000538696 PPFIA3O75145 1194 aa19.92■□□□□ 0.78
CLN6-202ENST00000538696 ALDH1A1P00352 501 aa19.92■□□□□ 0.78
CLN6-202ENST00000538696 HMGN5P82970 282 aaKnown RBP19.92■□□□□ 0.78
CLN6-202ENST00000538696 GTF3C2Q8WUA4 911 aaPredicted RBP19.92■□□□□ 0.78
CLN6-202ENST00000538696 PIBF1Q8WXW3 757 aa19.92■□□□□ 0.78
CLN6-202ENST00000538696 PHKBQ93100 1093 aa19.92■□□□□ 0.78
CLN6-202ENST00000538696 PIGSQ96S52 555 aa19.92■□□□□ 0.78
CLN6-202ENST00000538696 TXNRD2Q9NNW7 524 aa19.92■□□□□ 0.78
CLN6-202ENST00000538696 BTBD7Q9P203 1132 aa19.92■□□□□ 0.78
CLN6-202ENST00000538696 MTMR6Q9Y217 621 aa19.92■□□□□ 0.78
CLN6-202ENST00000538696 CA12O43570 354 aa19.91■□□□□ 0.78
CLN6-202ENST00000538696 NBR1Q14596 966 aa19.91■□□□□ 0.78
CLN6-202ENST00000538696 QRICH1Q2TAL8 776 aa19.91■□□□□ 0.78
CLN6-202ENST00000538696 CCDC174Q6PII3 467 aa19.91■□□□□ 0.78
CLN6-202ENST00000538696 HOMER1Q86YM7 354 aa19.91■□□□□ 0.78
CLN6-202ENST00000538696 ZFYVE28Q9HCC9 887 aa19.91■□□□□ 0.78
CLN6-202ENST00000538696 RNF186Q9NXI6 227 aa19.91■□□□□ 0.78
CLN6-202ENST00000538696 RBPJLQ9UBG7 517 aa19.91■□□□□ 0.78
CLN6-202ENST00000538696 ZNF536O15090 1300 aa19.91■□□□□ 0.78
CLN6-202ENST00000538696 MGAMO43451 1857 aa19.91■□□□□ 0.78
CLN6-202ENST00000538696 hCG_1642624A0A1W2PR95 340 aa19.9■□□□□ 0.78
CLN6-202ENST00000538696 ZBED4O75132 1171 aa19.9■□□□□ 0.78
CLN6-202ENST00000538696 FDX1P10109 184 aa19.9■□□□□ 0.78
CLN6-202ENST00000538696 TAL1P17542 331 aaPredicted RBP19.9■□□□□ 0.78
CLN6-202ENST00000538696 GCLCP48506 637 aaPredicted RBP19.9■□□□□ 0.78
CLN6-202ENST00000538696 TMEM132BQ14DG7 1078 aa19.9■□□□□ 0.78
CLN6-202ENST00000538696 LARP1BQ659C4 914 aaKnown RBP19.9■□□□□ 0.78
CLN6-202ENST00000538696 CPLX2Q6PUV4 134 aaKnown RBP19.9■□□□□ 0.78
CLN6-202ENST00000538696 MB21D1Q8N884 522 aa19.9■□□□□ 0.78
CLN6-202ENST00000538696 RRP36Q96EU6 259 aaKnown RBP19.9■□□□□ 0.78
CLN6-202ENST00000538696 PAGR1Q9BTK6 254 aa19.9■□□□□ 0.78
CLN6-202ENST00000538696 SLC26A6Q9BXS9 759 aa19.9■□□□□ 0.78
CLN6-202ENST00000538696 RNF26Q9BY78 433 aaPredicted RBP19.9■□□□□ 0.78
CLN6-202ENST00000538696 R3HDMLQ9H3Y0 253 aa19.9■□□□□ 0.78
CLN6-202ENST00000538696 ZNF214Q9UL59 606 aaPredicted RBP19.9■□□□□ 0.78
CLN6-202ENST00000538696 ZSWIM8A7E2V4 1837 aa19.9■□□□□ 0.78
CLN6-202ENST00000538696 VPS37CA5D8V6 355 aaPredicted RBP19.89■□□□□ 0.77
CLN6-202ENST00000538696 ZBTB5O15062 677 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 TLR2O60603 784 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 PPP1R11O60927 126 aaPredicted RBP19.89■□□□□ 0.77
CLN6-202ENST00000538696 CDKL5O76039 1030 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 FMNL1O95466 1100 aaPredicted RBP19.89■□□□□ 0.77
CLN6-202ENST00000538696 ZSCAN22P10073 491 aaPredicted RBP19.89■□□□□ 0.77
CLN6-202ENST00000538696 FDPSP14324 419 aaKnown RBP19.89■□□□□ 0.77
CLN6-202ENST00000538696 PDCP20941 246 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 FOSBP53539 338 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 ANKRD13CQ8N6S4 541 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 FAM184AQ8NB25 1140 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 CFHR5Q9BXR6 569 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 RAVER2Q9HCJ3 691 aaKnown RBP19.89■□□□□ 0.77
CLN6-202ENST00000538696 MORF4L1Q9UBU8 362 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 CPA4Q9UI42 421 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 RABGAP1Q9Y3P9 1069 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 V9GY48 417 aaPredicted RBP19.89■□□□□ 0.77
CLN6-202ENST00000538696 STK36Q9NRP7 1315 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 PLXNB2O15031 1838 aa19.89■□□□□ 0.77
CLN6-202ENST00000538696 PRPF3O43395 683 aaKnown RBP19.88■□□□□ 0.77
CLN6-202ENST00000538696 BAG4O95429 457 aaKnown RBP19.88■□□□□ 0.77
CLN6-202ENST00000538696 BCRP11274 1271 aa19.88■□□□□ 0.77
CLN6-202ENST00000538696 SSRP1Q08945 709 aaKnown RBP19.88■□□□□ 0.77
CLN6-202ENST00000538696 C17orf99Q6UX52 265 aa19.88■□□□□ 0.77
CLN6-202ENST00000538696 CPXCR1Q8N123 301 aa19.88■□□□□ 0.77
CLN6-202ENST00000538696 GBP4Q96PP9 640 aa19.88■□□□□ 0.77
CLN6-202ENST00000538696 CTDP1Q9Y5B0 961 aaPredicted RBP19.88■□□□□ 0.77
CLN6-202ENST00000538696 PNMA6FA0A0J9YX94 578 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 ATP2A1O14983 1001 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 TRPA1O75762 1119 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 TBC1D8O95759 1140 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 ICAM1P05362 532 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 MCM4P33991 863 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 OAZ1P54368 228 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 ERVK-9P63128 1117 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 ERVK-24P63145 666 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 MAP2K1Q02750 393 aaPredicted RBP19.87■□□□□ 0.77
CLN6-202ENST00000538696 PKN1Q16512 942 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 FAM110CQ1W6H9 321 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 CLEC17AQ6ZS10 378 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 TRIM22Q8IYM9 498 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 CHAMP1Q96JM3 812 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 AGBL1Q96MI9 1066 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 SAGE1Q9NXZ1 904 aa19.87■□□□□ 0.77
CLN6-202ENST00000538696 ORC3Q9UBD5 711 aaPredicted RBP19.87■□□□□ 0.77
CLN6-202ENST00000538696 SEC63Q9UGP8 760 aaKnown RBP19.87■□□□□ 0.77
CLN6-202ENST00000538696 F13A1P00488 732 aa19.86■□□□□ 0.77
CLN6-202ENST00000538696 PFKFB3Q16875 520 aaPredicted RBP19.86■□□□□ 0.77
CLN6-202ENST00000538696 Q3C1V9 767 aa19.86■□□□□ 0.77
CLN6-202ENST00000538696 SNRNP48Q6IEG0 339 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms