RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 PTPN21Q16825 1174 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 ZNF658Q5TYW1 1059 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 RRAGBQ5VZM2 374 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 AK8Q96MA6 479 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 RWDD2AQ9UIY3 292 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 G3V3G9 751 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 TTLL1O95922 423 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 OR52Z1P0C646 297 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 NEK8Q86SG6 692 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 TC2NQ8N9U0 490 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 KIF18AQ8NI77 898 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 ZNF592Q92610 1267 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 CTAGE1Q96RT6 745 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 ADD3Q9UEY8 706 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 LRRC10BA6NIK2 292 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 PP2D1A8MPX8 630 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 ARHGAP6O43182 974 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 PBX1P40424 430 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 FKBP1AP62942 108 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 GOLGA8FQ08AF8 430 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 GOLGA8DPQ0D2H9 430 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 KCNB1Q14721 858 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 LETM2Q2VYF4 491 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 REXO1Q8N1G1 1221 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 ZDHHC15Q96MV8 337 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 EHD4Q9H223 541 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 CUEDC2Q9H467 287 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 KBTBD4Q9NVX7 518 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 CTNND2Q9UQB3 1225 aa12.9□□□□□ -0.34
SLC28A1-204ENST00000538177 COL11A2P13942 1736 aaPredicted RBP12.89□□□□□ -0.35
SLC28A1-204ENST00000538177 STX10O60499 249 aa12.89□□□□□ -0.35
SLC28A1-204ENST00000538177 CCNT1O60563 726 aaKnown RBP12.89□□□□□ -0.35
SLC28A1-204ENST00000538177 HLA-DOAP06340 250 aa12.89□□□□□ -0.35
SLC28A1-204ENST00000538177 CRKP46108 304 aa12.89□□□□□ -0.35
SLC28A1-204ENST00000538177 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
SLC28A1-204ENST00000538177 MAGEF1Q9HAY2 307 aa12.89□□□□□ -0.35
SLC28A1-204ENST00000538177 FRMPD2Q68DX3 1309 aaPredicted RBP12.89□□□□□ -0.35
SLC28A1-204ENST00000538177 TEX33O43247 280 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 HDLBPQ00341 1268 aaKnown RBP12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 PAK1Q13153 545 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 STYK1Q6J9G0 422 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 TBCKQ8TEA7 893 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 ANKRD7Q92527 254 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 CCDC17Q96LX7 622 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 BAG1Q99933 345 aaPredicted RBP12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 LIMA1Q9UHB6 759 aaKnown RBP12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 KLRC4O43908 158 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 NFIAQ12857 509 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 FILIP1LQ4L180 1135 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 PPP4R3BQ5MIZ7 849 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 STRIP1Q5VSL9 837 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 JAKMIP3Q5VZ66 844 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 ZNF772Q68DY9 489 aaPredicted RBP12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 C2CD5Q86YS7 1000 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 CLEC10AQ8IUN9 316 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 REXO1L1PQ8IX06 675 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 NELFBQ8WX92 580 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 JMJD4Q9H9V9 463 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 KCNQ5Q9NR82 932 aa12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 BIN2Q9UBW5 565 aaPredicted RBP12.88□□□□□ -0.35
SLC28A1-204ENST00000538177 PNMA6FA0A0J9YX94 578 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 PRCPP42785 496 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 ADCY7P51828 1080 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 EIF6P56537 245 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 SPAG1Q07617 926 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 CABP7Q86V35 215 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 RASSF8Q8NHQ8 419 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 LRRC15Q8TF66 581 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 PANX2Q96RD6 677 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 DBNDD1Q9H9R9 158 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 GPCPD1Q9NPB8 672 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 AKR1B15C9JRZ8 316 aaPredicted RBP12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 RHOBTB3O94955 611 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 ETF1P62495 437 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 ZFPM1Q8IX07 1006 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 ADGRF4Q8IZF3 695 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 IGSF22Q8N9C0 903 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 COA7Q96BR5 231 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 MTMR8Q96EF0 704 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 IDI2Q9BXS1 227 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 DHX36Q9H2U1 1008 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 TMEM260Q9NX78 707 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 GDAQ9Y2T3 454 aa12.87□□□□□ -0.35
SLC28A1-204ENST00000538177 GREB1LQ9C091 1923 aaPredicted RBP12.86□□□□□ -0.35
SLC28A1-204ENST00000538177 H0YIN7 160 aa12.86□□□□□ -0.35
SLC28A1-204ENST00000538177 H7C1D1 291 aa12.86□□□□□ -0.35
SLC28A1-204ENST00000538177 EDIL3O43854 480 aa12.86□□□□□ -0.35
SLC28A1-204ENST00000538177 PLCG1P19174 1290 aa12.86□□□□□ -0.35
SLC28A1-204ENST00000538177 KRT31Q15323 416 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms