RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 PTPN14Q15678 1187 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 MAP7D2Q96T17 732 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 KBTBD4Q9NVX7 518 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 RPN1P04843 607 aaKnown RBP10.53□□□□□ -0.72
UBE3B-207ENST00000537063 PICALMQ13492 652 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 MTERF4Q7Z6M4 381 aaKnown RBP10.53□□□□□ -0.72
UBE3B-207ENST00000537063 LRRC15Q8TF66 581 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 ADD3Q9UEY8 706 aaKnown RBP10.53□□□□□ -0.72
UBE3B-207ENST00000537063 LRRC10BA6NIK2 292 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 NRDCO43847 1150 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 OR52Z1P0C646 297 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 KARSQ15046 597 aaKnown RBP10.53□□□□□ -0.72
UBE3B-207ENST00000537063 STRIP1Q5VSL9 837 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 NEK8Q86SG6 692 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 TC2NQ8N9U0 490 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 ANKRD7Q92527 254 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 IDI2Q9BXS1 227 aa10.53□□□□□ -0.72
UBE3B-207ENST00000537063 CCP110O43303 1012 aa10.52□□□□□ -0.72
UBE3B-207ENST00000537063 KLRC4O43908 158 aa10.52□□□□□ -0.72
UBE3B-207ENST00000537063 STAT6P42226 847 aa10.52□□□□□ -0.72
UBE3B-207ENST00000537063 CRKP46108 304 aa10.52□□□□□ -0.72
UBE3B-207ENST00000537063 PPP4R3BQ5MIZ7 849 aa10.52□□□□□ -0.72
UBE3B-207ENST00000537063 DACT2Q5SW24 774 aa10.52□□□□□ -0.72
UBE3B-207ENST00000537063 CTAGE1Q96RT6 745 aa10.52□□□□□ -0.72
UBE3B-207ENST00000537063 BLZF1Q9H2G9 400 aa10.52□□□□□ -0.72
UBE3B-207ENST00000537063 DNAJC18Q9H819 358 aa10.52□□□□□ -0.72
UBE3B-207ENST00000537063 LIMA1Q9UHB6 759 aaKnown RBP10.52□□□□□ -0.72
UBE3B-207ENST00000537063 ITIH6Q6UXX5 1313 aa10.52□□□□□ -0.72
UBE3B-207ENST00000537063 EDIL3O43854 480 aa10.52□□□□□ -0.73
UBE3B-207ENST00000537063 SMYD4Q8IYR2 804 aaPredicted RBP10.52□□□□□ -0.73
UBE3B-207ENST00000537063 REXO1Q8N1G1 1221 aaKnown RBP10.52□□□□□ -0.73
UBE3B-207ENST00000537063 IGSF22Q8N9C0 903 aa10.52□□□□□ -0.73
UBE3B-207ENST00000537063 PDCL3Q9H2J4 239 aa10.52□□□□□ -0.73
UBE3B-207ENST00000537063 F8W031 263 aaPredicted RBP10.52□□□□□ -0.73
UBE3B-207ENST00000537063 FECHP22830 423 aa10.52□□□□□ -0.73
UBE3B-207ENST00000537063 CLK2P49760 499 aaKnown RBP10.52□□□□□ -0.73
UBE3B-207ENST00000537063 SCNN1DP51172 638 aa10.52□□□□□ -0.73
UBE3B-207ENST00000537063 C7orf43Q8WVR3 580 aa10.52□□□□□ -0.73
UBE3B-207ENST00000537063 CCDC17Q96LX7 622 aa10.52□□□□□ -0.73
UBE3B-207ENST00000537063 MTMR9Q96QG7 549 aa10.52□□□□□ -0.73
UBE3B-207ENST00000537063 MYH7BA7E2Y1 1941 aa10.52□□□□□ -0.73
UBE3B-207ENST00000537063 PP2D1A8MPX8 630 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 ARHGAP6O43182 974 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 NFIAQ12857 509 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 LRRC47Q8N1G4 583 aaKnown RBP10.51□□□□□ -0.73
UBE3B-207ENST00000537063 JMJD4Q9H9V9 463 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 CTNND2Q9UQB3 1225 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 MTMR7Q9Y216 660 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 ATRNL1Q5VV63 1379 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 PNMA6FA0A0J9YX94 578 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 STX10O60499 249 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 RHOBTB3O94955 611 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 HLA-DOAP06340 250 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 CDK11BP21127 795 aaKnown RBP10.51□□□□□ -0.73
UBE3B-207ENST00000537063 PAK1Q13153 545 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 GPATCH4Q5T3I0 446 aaKnown RBP10.51□□□□□ -0.73
UBE3B-207ENST00000537063 SOGA3Q5TF21 947 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 HOMER1Q86YM7 354 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 C2CD5Q86YS7 1000 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 ADSSL1Q8N142 457 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 STAMQ92783 540 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 MKL1Q969V6 931 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 UBA5Q9GZZ9 404 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 DHX36Q9H2U1 1008 aaKnown RBP10.51□□□□□ -0.73
UBE3B-207ENST00000537063 RIC8AQ9NPQ8 531 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 TRMT1Q9NXH9 659 aaKnown RBP10.51□□□□□ -0.73
UBE3B-207ENST00000537063 FRMPD2Q68DX3 1309 aaPredicted RBP10.51□□□□□ -0.73
UBE3B-207ENST00000537063 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 PPP1R11O60927 126 aaPredicted RBP10.51□□□□□ -0.73
UBE3B-207ENST00000537063 CDC25AP30304 524 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 ADCY7P51828 1080 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 RRAGBQ5VZM2 374 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 REXO1L1PQ8IX06 675 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 TBCKQ8TEA7 893 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 PANX2Q96RD6 677 aa10.51□□□□□ -0.73
UBE3B-207ENST00000537063 FXR2P51116 673 aaKnown RBP eCLIP10.5□□□□□ -0.73
UBE3B-207ENST00000537063 HSP90AA2PQ14568 343 aaPredicted RBP10.5□□□□□ -0.73
UBE3B-207ENST00000537063 COBLL1Q53SF7 1204 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 HSP90AA4PQ58FG1 418 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 CLEC10AQ8IUN9 316 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 MMTAG2Q9BU76 263 aaKnown RBP10.5□□□□□ -0.73
UBE3B-207ENST00000537063 L2HGDHQ9H9P8 463 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 KCNQ5Q9NR82 932 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 FAM198AQ9UFP1 575 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 SERPINA10Q9UK55 444 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 ECE2O60344 883 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 CCNT1O60563 726 aaKnown RBP10.5□□□□□ -0.73
UBE3B-207ENST00000537063 UBA7P41226 1012 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 RBM10P98175 930 aaKnown RBP10.5□□□□□ -0.73
UBE3B-207ENST00000537063 TATDN1Q6P1N9 297 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 ZFPM1Q8IX07 1006 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 ADGRF4Q8IZF3 695 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 GIMAP8Q8ND71 665 aaPredicted RBP10.5□□□□□ -0.73
UBE3B-207ENST00000537063 TMX4Q9H1E5 349 aaPredicted RBP10.5□□□□□ -0.73
UBE3B-207ENST00000537063 DBNDD1Q9H9R9 158 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 TEX33O43247 280 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 STX17P56962 302 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 SPAG1Q07617 926 aa10.5□□□□□ -0.73
UBE3B-207ENST00000537063 LETM2Q2VYF4 491 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms