RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 METTL16Q86W50 562 aaKnown RBP8.78□□□□□ -1
CPSF7-216ENST00000536548 CNGA4Q8IV77 575 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 CTAGE4Q8IX94 777 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 ZNF579Q8NAF0 562 aaKnown RBP8.78□□□□□ -1
CPSF7-216ENST00000536548 APPBP2Q92624 585 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 SLC10A4Q96EP9 437 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 WNK4Q96J92 1243 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 TMEM87BQ96K49 555 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 GMLQ99445 158 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 HTATIP2Q9BUP3 242 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 ARHGAP39Q9C0H5 1083 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 ZCCHC17Q9NP64 241 aaKnown RBP8.78□□□□□ -1
CPSF7-216ENST00000536548 INTS13Q9NVM9 706 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 MAN1B1Q9UKM7 699 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 L1RE1Q9UN81 338 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 AKAP2Q9Y2D5 859 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 NFE2L3Q9Y4A8 694 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 ADGRG1Q9Y653 693 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 TTC28Q96AY4 2481 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 ITIH6Q6UXX5 1313 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 ZNF646O15015 1829 aaPredicted RBP8.77□□□□□ -1
CPSF7-216ENST00000536548 DNAH12Q6ZR08 3092 aa8.77□□□□□ -1
CPSF7-216ENST00000536548 A0A1B0GTH6 734 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 M0R2C6 588 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 EYA2O00167 538 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 NF2P35240 595 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 GJA5P36382 358 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 NOP2P46087 812 aaKnown RBP8.77□□□□□ -1.01
CPSF7-216ENST00000536548 GTF2A1P52655 376 aaPredicted RBP8.77□□□□□ -1.01
CPSF7-216ENST00000536548 CASP7P55210 303 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 MORC3Q14149 939 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 NR1I3Q14994 352 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 ICE2Q659A1 982 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 GPR153Q6NV75 609 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 LMBR1LQ6UX01 489 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 CHST3Q7LGC8 479 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 TMTC1Q8IUR5 882 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 EFCAB13Q8IY85 973 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 CCDC148Q8NFR7 591 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 PLBD2Q8NHP8 589 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 CELF1Q92879 486 aaKnown RBP8.77□□□□□ -1.01
CPSF7-216ENST00000536548 RPGRIP1Q96KN7 1286 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 MAP3K14Q99558 947 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 NAPGQ99747 312 aaPredicted RBP8.77□□□□□ -1.01
CPSF7-216ENST00000536548 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.77□□□□□ -1.01
CPSF7-216ENST00000536548 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.77□□□□□ -1.014e-7■■■□□ 16.7
CPSF7-216ENST00000536548 ANKZF1Q9H8Y5 726 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 PDE11AQ9HCR9 933 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 IQSEC3Q9UPP2 1182 aaPredicted RBP8.77□□□□□ -1.01
CPSF7-216ENST00000536548 PSME4Q14997 1843 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 LAMA4Q16363 1823 aa8.77□□□□□ -1.01
CPSF7-216ENST00000536548 ALPK3Q96L96 1907 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 H7C1W4 665 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 EVI5O60447 810 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 PPFIA4O75335 1185 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 CPP00450 1065 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 ZBTB48P10074 688 aaPredicted RBP8.76□□□□□ -1.01
CPSF7-216ENST00000536548 FECHP22830 423 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 SARSP49591 514 aaKnown RBP8.76□□□□□ -1.01
CPSF7-216ENST00000536548 BCAMP50895 628 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 ADKP55263 362 aaKnown RBP8.76□□□□□ -1.01
CPSF7-216ENST00000536548 MDM2Q00987 491 aaPredicted RBP8.76□□□□□ -1.01
CPSF7-216ENST00000536548 CKAP4Q07065 602 aaKnown RBP8.76□□□□□ -1.01
CPSF7-216ENST00000536548 SPAG1Q07617 926 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 SSRP1Q08945 709 aaKnown RBP8.76□□□□□ -1.01
CPSF7-216ENST00000536548 MCM6Q14566 821 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 LONRF3Q496Y0 759 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 RILPL1Q5EBL4 403 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 ZNF569Q5MCW4 686 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 SPATA1Q5VX52 437 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 WDR93Q6P2C0 686 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 GIGYF2Q6Y7W6 1299 aaKnown RBP8.76□□□□□ -1.01
CPSF7-216ENST00000536548 RASGRP2Q7LDG7 609 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 ATG9AQ7Z3C6 839 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 AGBL3Q8NEM8 1001 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 ANKRD20A12PQ8NF67 263 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 TBC1D16Q8TBP0 767 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 AFAP1L1Q8TED9 768 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 MXD3Q9BW11 206 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 EPC1Q9H2F5 836 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 MRPL44Q9H9J2 332 aaKnown RBP8.76□□□□□ -1.01
CPSF7-216ENST00000536548 ABCB6Q9NP58 842 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 CEP126Q9P2H0 1117 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 NDUFB9Q9Y6M9 179 aa8.76□□□□□ -1.01
CPSF7-216ENST00000536548 GOLGA8AA7E2F4 631 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 WNT10BO00744 389 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 SH2B2O14492 632 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-216ENST00000536548 ZBTB43O43298 467 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 MFAP3LO75121 409 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 PTPREP23469 700 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 PLA2G5P39877 138 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 USP8P40818 1118 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 AARSP49588 968 aaKnown RBP eCLIP8.75□□□□□ -1.01
CPSF7-216ENST00000536548 CORO7P57737 925 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 ANTXR2P58335 489 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 FOXO4P98177 505 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 PDE4BQ07343 736 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 GOLGA8FQ08AF8 430 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 GOLGA8DPQ0D2H9 430 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 CASP8Q14790 479 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms