RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 IFNGR1P15260 489 aa9.69□□□□□ -0.86
CASP4-213ENST00000534356 RPL10P27635 214 aaKnown RBP9.69□□□□□ -0.86
CASP4-213ENST00000534356 AMPD2Q01433 879 aa9.69□□□□□ -0.86
CASP4-213ENST00000534356 GTF2IRD2BQ6EKJ0 949 aa9.69□□□□□ -0.86
CASP4-213ENST00000534356 SLC23A3Q6PIS1 610 aa9.69□□□□□ -0.86
CASP4-213ENST00000534356 GTF2IRD2Q86UP8 949 aa9.69□□□□□ -0.86
CASP4-213ENST00000534356 CRACR2BQ8N4Y2 399 aaPredicted RBP9.69□□□□□ -0.86
CASP4-213ENST00000534356 AGBL5Q8NDL9 886 aa9.69□□□□□ -0.86
CASP4-213ENST00000534356 PI4K2BQ8TCG2 481 aa9.69□□□□□ -0.86
CASP4-213ENST00000534356 BTN2A2Q8WVV5 523 aa9.69□□□□□ -0.86
CASP4-213ENST00000534356 SGSM3Q96HU1 749 aa9.69□□□□□ -0.86
CASP4-213ENST00000534356 SLAMF8Q9P0V8 285 aa9.69□□□□□ -0.86
CASP4-213ENST00000534356 GPR55Q9Y2T6 319 aaPredicted RBP9.69□□□□□ -0.86
CASP4-213ENST00000534356 DNAJC25-GNG10A0A024R161 153 aa9.68□□□□□ -0.86
CASP4-213ENST00000534356 IQCA1LA6NCM1 817 aa9.68□□□□□ -0.86
CASP4-213ENST00000534356 GSTM1P09488 218 aa9.68□□□□□ -0.86
CASP4-213ENST00000534356 NOP2P46087 812 aaKnown RBP9.68□□□□□ -0.86
CASP4-213ENST00000534356 GP2P55259 537 aaKnown RBP9.68□□□□□ -0.86
CASP4-213ENST00000534356 PPP2R2AP63151 447 aa9.68□□□□□ -0.86
CASP4-213ENST00000534356 SSRP1Q08945 709 aaKnown RBP9.68□□□□□ -0.86
CASP4-213ENST00000534356 RALGPS1Q5JS13 557 aa9.68□□□□□ -0.86
CASP4-213ENST00000534356 WAPLQ7Z5K2 1190 aa9.68□□□□□ -0.86
CASP4-213ENST00000534356 ALPK1Q96QP1 1244 aa9.68□□□□□ -0.86
CASP4-213ENST00000534356 SPATA9Q9BWV2 254 aa9.68□□□□□ -0.86
CASP4-213ENST00000534356 ADAMTS10Q9H324 1103 aa9.68□□□□□ -0.86
CASP4-213ENST00000534356 MBNL3Q9NUK0 354 aaKnown RBP9.68□□□□□ -0.86
CASP4-213ENST00000534356 AP5S1Q9NUS5 200 aa9.68□□□□□ -0.86
CASP4-213ENST00000534356 STXBP3O00186 592 aa9.67□□□□□ -0.86
CASP4-213ENST00000534356 AURKAO14965 403 aa9.67□□□□□ -0.86
CASP4-213ENST00000534356 CAPNS1P04632 268 aa9.67□□□□□ -0.86
CASP4-213ENST00000534356 GRIA2P42262 883 aa9.67□□□□□ -0.86
CASP4-213ENST00000534356 XP32Q5T750 250 aa9.67□□□□□ -0.86
CASP4-213ENST00000534356 ABI1Q8IZP0 508 aa9.67□□□□□ -0.86
CASP4-213ENST00000534356 LRRC47Q8N1G4 583 aaKnown RBP9.67□□□□□ -0.86
CASP4-213ENST00000534356 CDADC1Q9BWV3 514 aa9.67□□□□□ -0.86
CASP4-213ENST00000534356 KDM2BQ8NHM5 1336 aa9.66□□□□□ -0.86
CASP4-213ENST00000534356 RNASE1P07998 156 aaKnown RBP9.66□□□□□ -0.86
CASP4-213ENST00000534356 ZNF792Q3KQV3 632 aa9.66□□□□□ -0.86
CASP4-213ENST00000534356 LILRB2Q8N423 598 aa9.66□□□□□ -0.86
CASP4-213ENST00000534356 NKX2-4Q9H2Z4 354 aa9.66□□□□□ -0.86
CASP4-213ENST00000534356 ARHGEF4Q9NR80 690 aa9.66□□□□□ -0.86
CASP4-213ENST00000534356 EBF1Q9UH73 591 aa9.66□□□□□ -0.86
CASP4-213ENST00000534356 SF1Q15637 639 aaKnown RBP9.65□□□□□ -0.86
CASP4-213ENST00000534356 Q8N3U1 123 aa9.65□□□□□ -0.86
CASP4-213ENST00000534356 G6PC3Q9BUM1 346 aa9.65□□□□□ -0.86
CASP4-213ENST00000534356 TMEM59LQ9UK28 342 aa9.65□□□□□ -0.86
CASP4-213ENST00000534356 OAS3Q9Y6K5 1087 aaKnown RBP9.65□□□□□ -0.86
CASP4-213ENST00000534356 ADCY3O60266 1144 aa9.64□□□□□ -0.87
CASP4-213ENST00000534356 ZGLP1P0C6A0 271 aa9.64□□□□□ -0.87
CASP4-213ENST00000534356 CYP4F3Q08477 520 aa9.64□□□□□ -0.87
CASP4-213ENST00000534356 HSP90AA2PQ14568 343 aaPredicted RBP9.64□□□□□ -0.87
CASP4-213ENST00000534356 CYP26B1Q9NR63 512 aa9.64□□□□□ -0.87
CASP4-213ENST00000534356 C19orf73Q9NVV2 129 aa9.64□□□□□ -0.87
CASP4-213ENST00000534356 BACE2Q9Y5Z0 518 aa9.64□□□□□ -0.87
CASP4-213ENST00000534356 C2orf71A6NGG8 1288 aa9.63□□□□□ -0.87
CASP4-213ENST00000534356 FAM153BP0C7A2 387 aa9.63□□□□□ -0.87
CASP4-213ENST00000534356 HK2P52789 917 aa9.63□□□□□ -0.87
CASP4-213ENST00000534356 SCRN1Q12765 414 aa9.63□□□□□ -0.87
CASP4-213ENST00000534356 YOD1Q5VVQ6 348 aaPredicted RBP9.63□□□□□ -0.87
CASP4-213ENST00000534356 LINC01599Q8WXQ3 324 aa9.63□□□□□ -0.87
CASP4-213ENST00000534356 SYTL4Q96C24 671 aaPredicted RBP9.63□□□□□ -0.87
CASP4-213ENST00000534356 AARSD1Q9BTE6 412 aaKnown RBP9.63□□□□□ -0.87
CASP4-213ENST00000534356 ERVK13-1Q9NX77 482 aa9.63□□□□□ -0.87
CASP4-213ENST00000534356 FGF10O15520 208 aaPredicted RBP9.62□□□□□ -0.87
CASP4-213ENST00000534356 ENDOUP21128 410 aaKnown RBP9.62□□□□□ -0.87
CASP4-213ENST00000534356 HOXC12P31275 282 aa9.62□□□□□ -0.87
CASP4-213ENST00000534356 RCSD1Q6JBY9 416 aa9.62□□□□□ -0.87
CASP4-213ENST00000534356 ZBTB38Q8NAP3 1195 aaPredicted RBP9.62□□□□□ -0.87
CASP4-213ENST00000534356 TMEM52Q8NDY8 209 aa9.62□□□□□ -0.87
CASP4-213ENST00000534356 COPS5Q92905 334 aa9.62□□□□□ -0.87
CASP4-213ENST00000534356 FCRL2Q96LA5 508 aaPredicted RBP9.62□□□□□ -0.87
CASP4-213ENST00000534356 CWC22Q9HCG8 908 aaKnown RBP9.62□□□□□ -0.87
CASP4-213ENST00000534356 GPRC5CQ9NQ84 441 aa9.62□□□□□ -0.87
CASP4-213ENST00000534356 SNRPB2P08579 225 aaKnown RBP9.61□□□□□ -0.87
CASP4-213ENST00000534356 CEBPAP49715 358 aaPredicted RBP9.61□□□□□ -0.87
CASP4-213ENST00000534356 SEPHS1P49903 392 aa9.61□□□□□ -0.87
CASP4-213ENST00000534356 JMYQ8N9B5 988 aa9.61□□□□□ -0.87
CASP4-213ENST00000534356 MAP6Q96JE9 813 aa9.61□□□□□ -0.87
CASP4-213ENST00000534356 IER2Q9BTL4 223 aa9.61□□□□□ -0.87
CASP4-213ENST00000534356 KANSL2Q9H9L4 492 aa9.61□□□□□ -0.87
CASP4-213ENST00000534356 RC3H2Q9HBD1 1191 aaKnown RBP9.61□□□□□ -0.87
CASP4-213ENST00000534356 TRAV20A0A0B4J274 112 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 PRODHO43272 600 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 SCG5P05408 212 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 ECI1P42126 302 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 KCNJ6P48051 423 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 GFRA1P56159 465 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 DUSP4Q13115 394 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 PRSS53Q2L4Q9 553 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 FOXB2Q5VYV0 432 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 EEF1DP3Q658K8 133 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 NBPF11Q86T75 865 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 NOP9Q86U38 636 aaKnown RBP9.6□□□□□ -0.87
CASP4-213ENST00000534356 NAT16Q8N8M0 369 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 THAP3Q8WTV1 239 aaPredicted RBP9.6□□□□□ -0.87
CASP4-213ENST00000534356 HHIPL1Q96JK4 782 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 PTCHD1Q96NR3 888 aa9.6□□□□□ -0.87
CASP4-213ENST00000534356 DLX3O60479 287 aa9.59□□□□□ -0.87
CASP4-213ENST00000534356 THBDP07204 575 aa9.59□□□□□ -0.87
CASP4-213ENST00000534356 FGFR1P11362 822 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms