RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 OSBPL3Q9H4L5 887 aa10.53□□□□□ -0.72
COPB1-211ENST00000534234 FAM184BQ9ULE4 1060 aa10.53□□□□□ -0.72
COPB1-211ENST00000534234 SYNGAP1Q96PV0 1343 aa10.53□□□□□ -0.72
COPB1-211ENST00000534234 MYH7P12883 1935 aa10.53□□□□□ -0.72
COPB1-211ENST00000534234 ZNF236Q9UL36 1845 aa10.53□□□□□ -0.72
COPB1-211ENST00000534234 ZNF536O15090 1300 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 CCDC171Q6TFL3 1326 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 NOVP48745 357 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 MFAP1P55081 439 aaKnown RBP10.52□□□□□ -0.72
COPB1-211ENST00000534234 HAND2P61296 217 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 ACVR2BQ13705 512 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 LRIT3Q3SXY7 679 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 MFSD6Q6ZSS7 791 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 TRERF1Q96PN7 1200 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 ABHD16BQ9H3Z7 469 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 ACAD9Q9H845 621 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 ZHX1Q9UKY1 873 aaPredicted RBP10.52□□□□□ -0.72
COPB1-211ENST00000534234 PRR12Q9ULL5 1215 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 PHF24Q9UPV7 400 aa10.52□□□□□ -0.72
COPB1-211ENST00000534234 POTEB2H3BUK9 544 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 ADAMTS4O75173 837 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 TOP1P11387 765 aaKnown RBP10.52□□□□□ -0.73
COPB1-211ENST00000534234 ALAS1P13196 640 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 SNAP25P60880 206 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 CNTN2Q02246 1040 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 TLE2Q04725 743 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 SNX17Q15036 470 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 TKFCQ3LXA3 575 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 TRIM60Q495X7 471 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 AKNAD1Q5T1N1 836 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 C1orf53Q5VUE5 145 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 CCDC174Q6PII3 467 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 RASGRP2Q7LDG7 609 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 LENG1Q96BZ8 264 aaPredicted RBP10.52□□□□□ -0.73
COPB1-211ENST00000534234 TMEM47Q9BQJ4 181 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 PRDM5Q9NQX1 630 aaPredicted RBP10.52□□□□□ -0.73
COPB1-211ENST00000534234 RNF146Q9NTX7 359 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 TCP11L1Q9NUJ3 509 aa10.52□□□□□ -0.73
COPB1-211ENST00000534234 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.52□□□□□ -0.73
COPB1-211ENST00000534234 GREB1LQ9C091 1923 aaPredicted RBP10.51□□□□□ -0.73
COPB1-211ENST00000534234 ZMYM6O95789 1325 aa10.51□□□□□ -0.73
COPB1-211ENST00000534234 DUSP11O75319 330 aaKnown RBP10.51□□□□□ -0.73
COPB1-211ENST00000534234 CCDC96Q2M329 555 aa10.51□□□□□ -0.73
COPB1-211ENST00000534234 CCDC144BQ3MJ40 725 aa10.51□□□□□ -0.73
COPB1-211ENST00000534234 TTBK2Q6IQ55 1244 aa10.51□□□□□ -0.73
COPB1-211ENST00000534234 CWC27Q6UX04 472 aaKnown RBP10.51□□□□□ -0.73
COPB1-211ENST00000534234 ARMCX2Q7L311 632 aa10.51□□□□□ -0.73
COPB1-211ENST00000534234 CCDC144CPQ8IYA2 1237 aa10.51□□□□□ -0.73
COPB1-211ENST00000534234 FAM133AQ8N9E0 248 aa10.51□□□□□ -0.73
COPB1-211ENST00000534234 DCAF4Q8WV16 495 aa10.51□□□□□ -0.73
COPB1-211ENST00000534234 FGD4Q96M96 766 aa10.51□□□□□ -0.73
COPB1-211ENST00000534234 TTC14Q96N46 770 aa10.51□□□□□ -0.73
COPB1-211ENST00000534234 TSEN34Q9BSV6 310 aaKnown RBP10.51□□□□□ -0.73
COPB1-211ENST00000534234 A1CFQ9NQ94 594 aaKnown RBP10.51□□□□□ -0.73
COPB1-211ENST00000534234 SUPT16HQ9Y5B9 1047 aaKnown RBP10.51□□□□□ -0.73
COPB1-211ENST00000534234 SYNRGQ9UMZ2 1314 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 A0A1W2PQ45 241 aaPredicted RBP10.5□□□□□ -0.73
COPB1-211ENST00000534234 A0A1W2PQY0 241 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 ZNF213O14771 459 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 PCP11498 1178 aaKnown RBP10.5□□□□□ -0.73
COPB1-211ENST00000534234 SLC16A2P36021 539 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 ACLYP53396 1101 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 KCNA10Q16322 511 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 GPR153Q6NV75 609 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 BTNL9Q6UXG8 535 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 SH3RF1Q7Z6J0 888 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 KLHDC9Q8NEP7 349 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 NUP133Q8WUM0 1156 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 RNF41Q9H4P4 317 aaPredicted RBP10.5□□□□□ -0.73
COPB1-211ENST00000534234 GPCPD1Q9NPB8 672 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 DIAPH3Q9NSV4 1193 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 CCPG1Q9ULG6 757 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 MYH8P13535 1937 aa10.5□□□□□ -0.73
COPB1-211ENST00000534234 TRIM43BA6NCK2 446 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 SOWAHBA6NEL2 793 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 MOXD2PA6NHM9 499 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 ASB14A6NK59 587 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 ICAM1P05362 532 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 C6orf222P0C671 652 aaPredicted RBP10.49□□□□□ -0.73
COPB1-211ENST00000534234 MUM1L1Q5H9M0 696 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 CCSAPQ6IQ19 270 aaPredicted RBP10.49□□□□□ -0.73
COPB1-211ENST00000534234 TBC1D10CQ8IV04 446 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 ESR2Q92731 530 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 BADQ92934 168 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 TRIM43Q96BQ3 446 aaPredicted RBP10.49□□□□□ -0.73
COPB1-211ENST00000534234 SPC25Q9HBM1 224 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 STARD7Q9NQZ5 370 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 PDLIM7Q9NR12 457 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 FOXD4L1Q9NU39 408 aa10.49□□□□□ -0.73
COPB1-211ENST00000534234 FRMPD2Q68DX3 1309 aaPredicted RBP10.49□□□□□ -0.73
COPB1-211ENST00000534234 SZT2Q5T011 3432 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 HIP1O00291 1037 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 ADCY6O43306 1168 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 PQBP1O60828 265 aaKnown RBP10.48□□□□□ -0.73
COPB1-211ENST00000534234 IRX5P78411 483 aaPredicted RBP10.48□□□□□ -0.73
COPB1-211ENST00000534234 GNASQ5JWF2 1037 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 SYDE2Q5VT97 1194 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 NSMFQ6X4W1 530 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 NOL8Q76FK4 1167 aaKnown RBP10.48□□□□□ -0.73
COPB1-211ENST00000534234 DEFB123Q8N688 67 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms