RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 TTF2Q9UNY4 1162 aaKnown RBP6.88□□□□□ -1.31
CHKA-208ENST00000533910 NIP7Q9Y221 180 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHKA-208ENST00000533910 AKAP2Q9Y2D5 859 aa6.88□□□□□ -1.31
CHKA-208ENST00000533910 ANKRD18BA2A2Z9 1011 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 GIPC1O14908 333 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 EPB41L2O43491 1005 aaKnown RBP6.87□□□□□ -1.31
CHKA-208ENST00000533910 REC8O95072 547 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 ATP5JP18859 108 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 DNAJA1P31689 397 aaKnown RBP6.87□□□□□ -1.31
CHKA-208ENST00000533910 CTBSQ01459 385 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 SPRED3Q2MJR0 410 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 LRRC24Q50LG9 513 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 FIGNL1Q6PIW4 674 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 HS2ST1Q7LGA3 356 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 VGLL2Q8N8G2 317 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 FBXO41Q8TF61 875 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 PMEPA1Q969W9 287 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 EVI5LQ96CN4 794 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 IL17RAQ96F46 866 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 TCF12Q99081 682 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 OSMRQ99650 979 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 OXCT2Q9BYC2 517 aaPredicted RBP6.87□□□□□ -1.31
CHKA-208ENST00000533910 PUS3Q9BZE2 481 aaKnown RBP6.87□□□□□ -1.31
CHKA-208ENST00000533910 CCDC8Q9H0W5 538 aaPredicted RBP6.87□□□□□ -1.31
CHKA-208ENST00000533910 LIN7BQ9HAP6 207 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 RIPOR2Q9Y4F9 1068 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 TAF1P21675 1872 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 LRRC37AA6NMS7 1700 aa6.87□□□□□ -1.31
CHKA-208ENST00000533910 CARMIL3Q8ND23 1372 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 RAD50Q92878 1312 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 MINDY4BA8MYZ0 360 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 ZBTB42B2RXF5 422 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 PLSCR1O15162 318 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 TRIM37O94972 964 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 BCRP11274 1271 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 EDN3P14138 238 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 MX2P20592 715 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 RXRBP28702 533 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 GRIA4P48058 902 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 TBC1D8BQ0IIM8 1120 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 SLC10A5Q5PT55 438 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 TBC1D9BQ66K14 1250 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 PODNQ7Z5L7 613 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 ZNF654Q8IZM8 581 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 BEND7Q8N7W2 519 aaPredicted RBP6.86□□□□□ -1.31
CHKA-208ENST00000533910 NEDD1Q8NHV4 660 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHKA-208ENST00000533910 DNAJC2Q99543 621 aaKnown RBP6.86□□□□□ -1.31
CHKA-208ENST00000533910 KIF2CQ99661 725 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 DBNDD2Q9BQY9 259 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 USP26Q9BXU7 913 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 ABCB6Q9NP58 842 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 KBTBD4Q9NVX7 518 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 RGS17Q9UGC6 210 aaPredicted RBP6.86□□□□□ -1.31
CHKA-208ENST00000533910 PRKAG2Q9UGJ0 569 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 SRP68Q9UHB9 627 aaKnown RBP6.86□□□□□ -1.31
CHKA-208ENST00000533910 INPP5FQ9Y2H2 1132 aa6.86□□□□□ -1.31
CHKA-208ENST00000533910 ANKRD31Q8N7Z5 1873 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 MED23Q9ULK4 1368 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 MROH5Q6ZUA9 1318 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 A0A1B0GUL7 405 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 SGSM2O43147 1006 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 PSAPP07602 524 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 HCLS1P14317 486 aaPredicted RBP6.85□□□□□ -1.31
CHKA-208ENST00000533910 GSTT1P30711 240 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 LBRQ14739 615 aaKnown RBP6.85□□□□□ -1.31
CHKA-208ENST00000533910 SF3B3Q15393 1217 aaKnown RBP6.85□□□□□ -1.31
CHKA-208ENST00000533910 TXNRD1Q16881 649 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 CCDC152Q4G0S7 254 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 TRAPPC3LQ5T215 181 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 GPAT2Q6NUI2 795 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 TPTE2Q6XPS3 522 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 DHX32Q7L7V1 743 aaKnown RBP6.85□□□□□ -1.31
CHKA-208ENST00000533910 RILPL2Q969X0 211 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 HAUS7Q99871 368 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 NYXQ9GZU5 481 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 IL25Q9H293 177 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 MYH13Q9UKX3 1938 aa6.85□□□□□ -1.31
CHKA-208ENST00000533910 MYO5AQ9Y4I1 1855 aaKnown RBP6.84□□□□□ -1.31
CHKA-208ENST00000533910 HIP1O00291 1037 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 MAP4K4O95819 1239 aaPredicted RBP6.84□□□□□ -1.31
CHKA-208ENST00000533910 RFC4P35249 363 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 GTF2F1P35269 517 aaKnown RBP eCLIP6.84□□□□□ -1.31
CHKA-208ENST00000533910 ATP11AP98196 1134 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 HYAL2Q12891 473 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 PAK2Q13177 524 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 BECN1Q14457 450 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 SF3A1Q15459 793 aaKnown RBP6.84□□□□□ -1.31
CHKA-208ENST00000533910 CCDC85BQ15834 202 aaPredicted RBP6.84□□□□□ -1.31
CHKA-208ENST00000533910 METTL24Q5JXM2 366 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 ADAMTSL4Q6UY14 1074 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 LDHAL6AQ6ZMR3 332 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 DTHD1Q6ZMT9 781 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 SMIM5Q71RC9 77 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 ERMP1Q7Z2K6 904 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 CEP120Q8N960 986 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 SNX21Q969T3 373 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 C11orf16Q9NQ32 467 aa6.84□□□□□ -1.31
CHKA-208ENST00000533910 PHF24Q9UPV7 400 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms