RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 NBPF6Q5VWK0 638 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 FYB2Q5VWT5 728 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 GALNT18Q6P9A2 607 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 CYP2R1Q6VVX0 501 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 EEPD1Q7L9B9 569 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 NBPF4Q96M43 638 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 FCRL3Q96P31 734 aaPredicted RBP4.29□□□□□ -1.72
ATM-220ENST00000533526 FMNL2Q96PY5 1086 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 TRIM55Q9BYV6 548 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 SP110Q9HB58 689 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 AP5S1Q9NUS5 200 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 SUSD2Q9UGT4 822 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 CARMIL2Q6F5E8 1435 aa4.29□□□□□ -1.72
ATM-220ENST00000533526 TRBV23OR9-2A0A075B6M9 112 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 FADS2P1A8MWK0 482 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 AGRPO00253 132 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 NRDCO43847 1150 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 CD3EP07766 207 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 RTP1P59025 263 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 ERVFC1P60507 584 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 RBL2Q08999 1139 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 RAB33AQ14088 237 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 RTP2Q5QGT7 225 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 EEF1DP3Q658K8 133 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 CEP128Q6ZU80 1094 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 NAT16Q8N8M0 369 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 ADCY4Q8NFM4 1077 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 HHIPL1Q96JK4 782 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 ZDHHC15Q96MV8 337 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 SLC6A17Q9H1V8 727 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 CRTAC1Q9NQ79 661 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 CGGBP1Q9UFW8 167 aaPredicted RBP4.28□□□□□ -1.72
ATM-220ENST00000533526 EBF1Q9UH73 591 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 EMC9Q9Y3B6 208 aa4.28□□□□□ -1.72
ATM-220ENST00000533526 C2orf71A6NGG8 1288 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 AURKAO14965 403 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 FGF10O15520 208 aaPredicted RBP4.27□□□□□ -1.73
ATM-220ENST00000533526 SUSD5O60279 629 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 VAMP4O75379 141 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 GJB6O95452 261 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 GTF2F1P35269 517 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATM-220ENST00000533526 LAPTM5Q13571 262 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 DDR2Q16832 855 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 SV2CQ496J9 727 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 RCSD1Q6JBY9 416 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 MPZL3Q6UWV2 235 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 ZPBP2Q6X784 338 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 ZNF513Q8N8E2 541 aaPredicted RBP4.27□□□□□ -1.73
ATM-220ENST00000533526 HNRNPLLQ8WVV9 542 aaKnown RBP4.27□□□□□ -1.73
ATM-220ENST00000533526 PPP1R14AQ96A00 147 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 CCDC140Q96MF4 163 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 C19orf44Q9H6X5 657 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 CYP26B1Q9NR63 512 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 ERVK13-1Q9NX77 482 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 LRP2BPQ9P2M1 347 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 GPR160Q9UJ42 338 aa4.27□□□□□ -1.73
ATM-220ENST00000533526 A0A1W2PQ27 194 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 A0A1W2PQ64 194 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 A0A1W2PQC6 194 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 A0A1W2PQD8 194 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 IQCA1LA6NCM1 817 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 ZNF503-AS2A6NEH8 195 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 LRRC10BA6NIK2 292 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 PSPNO60542 156 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 USP2O75604 605 aaPredicted RBP4.26□□□□□ -1.73
ATM-220ENST00000533526 FARP2O94887 1054 aaPredicted RBP4.26□□□□□ -1.73
ATM-220ENST00000533526 KCNH1O95259 989 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 PNLIPP16233 465 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 HOXC12P31275 282 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 TRHRP34981 398 aaPredicted RBP4.26□□□□□ -1.73
ATM-220ENST00000533526 ARL4AP40617 200 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 SEPHS1P49903 392 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 DPY19L1Q2PZI1 675 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 NLRX1Q86UT6 975 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 JAMLQ86YT9 394 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 IRF2BP1Q8IU81 584 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 KSR1Q8IVT5 923 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 TRIM59Q8IWR1 403 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 CELF2-AS1Q8N7Q2 184 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 TMEM52Q8NDY8 209 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 ST13P5Q8NFI4 369 aaPredicted RBP4.26□□□□□ -1.73
ATM-220ENST00000533526 NLGN2Q8NFZ4 835 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 MICAL1Q8TDZ2 1067 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 MRGPRX3Q96LB0 322 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 PTCHD1Q96NR3 888 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 RNF32Q9H0A6 362 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 ST7Q9NRC1 585 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 SIRPGQ9P1W8 387 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 APEX2Q9UBZ4 518 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 YBX2Q9Y2T7 364 aaKnown RBP4.26□□□□□ -1.73
ATM-220ENST00000533526 BACE2Q9Y5Z0 518 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 TAF6LQ9Y6J9 622 aa4.26□□□□□ -1.73
ATM-220ENST00000533526 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.26□□□□□ -1.73
ATM-220ENST00000533526 NOTOA8MTQ0 251 aa4.25□□□□□ -1.73
ATM-220ENST00000533526 CPP00450 1065 aa4.25□□□□□ -1.73
ATM-220ENST00000533526 IFNGR1P15260 489 aa4.25□□□□□ -1.73
ATM-220ENST00000533526 HSF5Q4G112 596 aaPredicted RBP4.25□□□□□ -1.73
ATM-220ENST00000533526 IQCEQ6IPM2 695 aa4.25□□□□□ -1.73
ATM-220ENST00000533526 SLCO6A1Q86UG4 719 aa4.25□□□□□ -1.73
ATM-220ENST00000533526 SREK1Q8WXA9 508 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms