RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 SLC25A27O95847 323 aa24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 ICAM1P05362 532 aa24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 XBP1P17861 261 aa24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 NTRK3Q16288 839 aa24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 FAM110CQ1W6H9 321 aa24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 FBXO11Q86XK2 927 aa24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 CCDC83Q8IWF9 413 aa24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 FAM177A1Q8N128 213 aaPredicted RBP24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 INTS4Q96HW7 963 aaKnown RBP24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 MAF1Q9H063 256 aa24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 RNF186Q9NXI6 227 aa24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 MORF4L1Q9UBU8 362 aa24.42■■□□□ 1.5
PTP4A2-215ENST00000533408 STK36Q9NRP7 1315 aa24.41■■□□□ 1.5
PTP4A2-215ENST00000533408 LARGE1O95461 756 aa24.41■■□□□ 1.5
PTP4A2-215ENST00000533408 STAT3P40763 770 aa24.41■■□□□ 1.5
PTP4A2-215ENST00000533408 CRHR2Q13324 411 aa24.41■■□□□ 1.5
PTP4A2-215ENST00000533408 HOMER1Q86YM7 354 aa24.41■■□□□ 1.5
PTP4A2-215ENST00000533408 CCDC12Q8WUD4 166 aaPredicted RBP24.41■■□□□ 1.5
PTP4A2-215ENST00000533408 PAGR1Q9BTK6 254 aa24.41■■□□□ 1.5
PTP4A2-215ENST00000533408 SLC26A6Q9BXS9 759 aa24.41■■□□□ 1.5
PTP4A2-215ENST00000533408 DAXXQ9UER7 740 aaPredicted RBP24.41■■□□□ 1.5
PTP4A2-215ENST00000533408 CYTH3O43739 400 aa24.4■■□□□ 1.5
PTP4A2-215ENST00000533408 TRPA1O75762 1119 aa24.4■■□□□ 1.5
PTP4A2-215ENST00000533408 FUT2Q10981 343 aa24.4■■□□□ 1.5
PTP4A2-215ENST00000533408 PLS1Q14651 629 aa24.4■■□□□ 1.5
PTP4A2-215ENST00000533408 NBPF11Q86T75 865 aa24.4■■□□□ 1.5
PTP4A2-215ENST00000533408 TEX2Q8IWB9 1127 aa24.4■■□□□ 1.5
PTP4A2-215ENST00000533408 CMTR1Q8N1G2 835 aaKnown RBP24.4■■□□□ 1.5
PTP4A2-215ENST00000533408 PIGSQ96S52 555 aa24.4■■□□□ 1.5
PTP4A2-215ENST00000533408 RBPJLQ9UBG7 517 aa24.4■■□□□ 1.5
PTP4A2-215ENST00000533408 FBXO40Q9UH90 709 aa24.4■■□□□ 1.5
PTP4A2-215ENST00000533408 THSD7BQ9C0I4 1608 aa24.39■■□□□ 1.5
PTP4A2-215ENST00000533408 CNTNAP5Q8WYK1 1306 aa24.39■■□□□ 1.5
PTP4A2-215ENST00000533408 CUL4AQ13619 759 aa24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 ARHGEF6Q15052 776 aa24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 QRICH1Q2TAL8 776 aa24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 NOM1Q5C9Z4 860 aaKnown RBP24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 CCDC174Q6PII3 467 aa24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 CPXCR1Q8N123 301 aa24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 ANKRD13CQ8N6S4 541 aa24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 SHCBP1Q8NEM2 672 aa24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 SPATC1LQ9H0A9 340 aa24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 CPVLQ9H3G5 476 aa24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 MROH8Q9H579 483 aa24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 CCPG1Q9ULG6 757 aa24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 MRPL11Q9Y3B7 192 aaKnown RBP24.39■■□□□ 1.49
PTP4A2-215ENST00000533408 ABCB11O95342 1321 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 ERVK-9P63128 1117 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 ERVK-24P63145 666 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 KIF22Q14807 665 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 TMEM132BQ14DG7 1078 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 PFKFB3Q16875 520 aaPredicted RBP24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 SNRNP48Q6IEG0 339 aaKnown RBP24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 C17orf99Q6UX52 265 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 RIOX2Q8IUF8 465 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 FAM184AQ8NB25 1140 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 REPS2Q8NFH8 660 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 GLT8D2Q9H1C3 349 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 ORC3Q9UBD5 711 aaPredicted RBP24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 SMC3Q9UQE7 1217 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 PCDHA1Q9Y5I3 950 aa24.38■■□□□ 1.49
PTP4A2-215ENST00000533408 PTPDC1A2A3K4 754 aa24.37■■□□□ 1.49
PTP4A2-215ENST00000533408 SCG2P13521 617 aa24.37■■□□□ 1.49
PTP4A2-215ENST00000533408 MCF2L2Q86YR7 1114 aa24.37■■□□□ 1.49
PTP4A2-215ENST00000533408 SAMD3Q8N6K7 520 aa24.37■■□□□ 1.49
PTP4A2-215ENST00000533408 NSUN7Q8NE18 718 aaKnown RBP24.37■■□□□ 1.49
PTP4A2-215ENST00000533408 CHST13Q8NET6 341 aa24.37■■□□□ 1.49
PTP4A2-215ENST00000533408 PHKBQ93100 1093 aa24.37■■□□□ 1.49
PTP4A2-215ENST00000533408 CWC22Q9HCG8 908 aaKnown RBP24.37■■□□□ 1.49
PTP4A2-215ENST00000533408 RAVER2Q9HCJ3 691 aaKnown RBP24.37■■□□□ 1.49
PTP4A2-215ENST00000533408 SH3GLB2Q9NR46 395 aa24.37■■□□□ 1.49
PTP4A2-215ENST00000533408 ZNF214Q9UL59 606 aaPredicted RBP24.37■■□□□ 1.49
PTP4A2-215ENST00000533408 BCRP11274 1271 aa24.36■■□□□ 1.49
PTP4A2-215ENST00000533408 PDIA4P13667 645 aaKnown RBP24.36■■□□□ 1.49
PTP4A2-215ENST00000533408 MAPK4P31152 587 aa24.36■■□□□ 1.49
PTP4A2-215ENST00000533408 TRIM29Q14134 588 aa24.36■■□□□ 1.49
PTP4A2-215ENST00000533408 PPP1R18Q6NYC8 613 aa24.36■■□□□ 1.49
PTP4A2-215ENST00000533408 WBP1LQ9NX94 342 aa24.36■■□□□ 1.49
PTP4A2-215ENST00000533408 BTBD7Q9P203 1132 aa24.36■■□□□ 1.49
PTP4A2-215ENST00000533408 CPA4Q9UI42 421 aa24.36■■□□□ 1.49
PTP4A2-215ENST00000533408 ADGRA2Q96PE1 1338 aa24.35■■□□□ 1.49
PTP4A2-215ENST00000533408 HEATR3Q7Z4Q2 680 aa24.35■■□□□ 1.49
PTP4A2-215ENST00000533408 JMYQ8N9B5 988 aa24.35■■□□□ 1.49
PTP4A2-215ENST00000533408 CCDC148Q8NFR7 591 aa24.35■■□□□ 1.49
PTP4A2-215ENST00000533408 SMARCC2Q8TAQ2 1214 aa24.35■■□□□ 1.49
PTP4A2-215ENST00000533408 PIBF1Q8WXW3 757 aa24.35■■□□□ 1.49
PTP4A2-215ENST00000533408 STRNO43815 780 aa24.34■■□□□ 1.49
PTP4A2-215ENST00000533408 CTDNEP1O95476 244 aa24.34■■□□□ 1.49
PTP4A2-215ENST00000533408 ALAS1P13196 640 aa24.34■■□□□ 1.49
PTP4A2-215ENST00000533408 AGBL1Q96MI9 1066 aa24.34■■□□□ 1.49
PTP4A2-215ENST00000533408 BARHL2Q9NY43 387 aa24.34■■□□□ 1.49
PTP4A2-215ENST00000533408 MAP3K20Q9NYL2 800 aaKnown RBP24.34■■□□□ 1.49
PTP4A2-215ENST00000533408 IVNS1ABPQ9Y6Y0 642 aa24.34■■□□□ 1.49
PTP4A2-215ENST00000533408 ZNF536O15090 1300 aa24.34■■□□□ 1.49
PTP4A2-215ENST00000533408 CNMDO75829 334 aa24.33■■□□□ 1.49
PTP4A2-215ENST00000533408 TBC1D8O95759 1140 aa24.33■■□□□ 1.49
PTP4A2-215ENST00000533408 PDCP20941 246 aa24.33■■□□□ 1.49
PTP4A2-215ENST00000533408 SLC4A3P48751 1232 aa24.33■■□□□ 1.49
PTP4A2-215ENST00000533408 SNAP25P60880 206 aa24.33■■□□□ 1.49
PTP4A2-215ENST00000533408 SP3Q02447 781 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms