RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 NCAPG2Q86XI2 1143 aa25.9■■□□□ 1.74
LRRK1-208ENST00000532029 RIOX2Q8IUF8 465 aa25.9■■□□□ 1.74
LRRK1-208ENST00000532029 TNS4Q8IZW8 715 aa25.9■■□□□ 1.74
LRRK1-208ENST00000532029 KIF2CQ99661 725 aa25.9■■□□□ 1.74
LRRK1-208ENST00000532029 EFCC1Q9HA90 598 aa25.9■■□□□ 1.74
LRRK1-208ENST00000532029 AK2P54819 239 aa25.89■■□□□ 1.74
LRRK1-208ENST00000532029 PPP2R5BQ15173 497 aa25.89■■□□□ 1.74
LRRK1-208ENST00000532029 RABEP1Q15276 862 aa25.89■■□□□ 1.74
LRRK1-208ENST00000532029 CDC37Q16543 378 aaPredicted RBP25.89■■□□□ 1.74
LRRK1-208ENST00000532029 COA7Q96BR5 231 aa25.89■■□□□ 1.74
LRRK1-208ENST00000532029 TRIM47Q96LD4 638 aa25.89■■□□□ 1.74
LRRK1-208ENST00000532029 LARP6Q9BRS8 491 aaKnown RBP25.89■■□□□ 1.74
LRRK1-208ENST00000532029 MROH8Q9H579 483 aa25.89■■□□□ 1.74
LRRK1-208ENST00000532029 JMJD4Q9H9V9 463 aa25.89■■□□□ 1.74
LRRK1-208ENST00000532029 PNMA2Q9UL42 364 aa25.89■■□□□ 1.74
LRRK1-208ENST00000532029 COL11A1P12107 1806 aaPredicted RBP25.88■■□□□ 1.73
LRRK1-208ENST00000532029 CCDC196A0A1B0GTZ2 297 aa25.88■■□□□ 1.73
LRRK1-208ENST00000532029 GNRH1P01148 92 aa25.88■■□□□ 1.73
LRRK1-208ENST00000532029 ERCC3P19447 782 aa25.88■■□□□ 1.73
LRRK1-208ENST00000532029 HOXD10P28358 340 aa25.88■■□□□ 1.73
LRRK1-208ENST00000532029 CTGFP29279 349 aa25.88■■□□□ 1.73
LRRK1-208ENST00000532029 PLEKHH3Q7Z736 793 aa25.88■■□□□ 1.73
LRRK1-208ENST00000532029 ZNF274Q96GC6 653 aaPredicted RBP25.88■■□□□ 1.73
LRRK1-208ENST00000532029 CCPG1Q9ULG6 757 aa25.88■■□□□ 1.73
LRRK1-208ENST00000532029 TRIM17Q9Y577 477 aa25.88■■□□□ 1.73
LRRK1-208ENST00000532029 ZNF536O15090 1300 aa25.88■■□□□ 1.73
LRRK1-208ENST00000532029 PLEKHA8P1O95397 391 aa25.87■■□□□ 1.73
LRRK1-208ENST00000532029 ICAM1P05362 532 aa25.87■■□□□ 1.73
LRRK1-208ENST00000532029 SMARCA1P28370 1054 aa25.87■■□□□ 1.73
LRRK1-208ENST00000532029 PDIA3P30101 505 aaKnown RBP25.87■■□□□ 1.73
LRRK1-208ENST00000532029 TMTC3Q6ZXV5 915 aa25.87■■□□□ 1.73
LRRK1-208ENST00000532029 GPR142Q7Z601 462 aa25.87■■□□□ 1.73
LRRK1-208ENST00000532029 AGBL1Q96MI9 1066 aa25.87■■□□□ 1.73
LRRK1-208ENST00000532029 SPZ1Q9BXG8 430 aa25.87■■□□□ 1.73
LRRK1-208ENST00000532029 RIOX1Q9H6W3 641 aa25.87■■□□□ 1.73
LRRK1-208ENST00000532029 IVNS1ABPQ9Y6Y0 642 aa25.87■■□□□ 1.73
LRRK1-208ENST00000532029 CASP8AP2Q9UKL3 1982 aa25.87■■□□□ 1.73
LRRK1-208ENST00000532029 TKFCQ3LXA3 575 aa25.86■■□□□ 1.73
LRRK1-208ENST00000532029 NOL8Q76FK4 1167 aaKnown RBP25.86■■□□□ 1.73
LRRK1-208ENST00000532029 CTU1Q7Z7A3 348 aaKnown RBP25.86■■□□□ 1.73
LRRK1-208ENST00000532029 NBPF11Q86T75 865 aa25.86■■□□□ 1.73
LRRK1-208ENST00000532029 HOMER1Q86YM7 354 aa25.86■■□□□ 1.73
LRRK1-208ENST00000532029 SRBD1Q8N5C6 995 aaKnown RBP25.86■■□□□ 1.73
LRRK1-208ENST00000532029 HPS5Q9UPZ3 1129 aa25.86■■□□□ 1.73
LRRK1-208ENST00000532029 NID2Q14112 1375 aa25.85■■□□□ 1.73
LRRK1-208ENST00000532029 CYTH3O43739 400 aa25.85■■□□□ 1.73
LRRK1-208ENST00000532029 ALAS1P13196 640 aa25.85■■□□□ 1.73
LRRK1-208ENST00000532029 CAP1Q01518 475 aa25.85■■□□□ 1.73
LRRK1-208ENST00000532029 SLC35G1Q2M3R5 365 aa25.85■■□□□ 1.73
LRRK1-208ENST00000532029 QRICH1Q2TAL8 776 aa25.85■■□□□ 1.73
LRRK1-208ENST00000532029 OTOP1Q7RTM1 612 aa25.85■■□□□ 1.73
LRRK1-208ENST00000532029 CMTR1Q8N1G2 835 aaKnown RBP25.85■■□□□ 1.73
LRRK1-208ENST00000532029 PIGSQ96S52 555 aa25.85■■□□□ 1.73
LRRK1-208ENST00000532029 FBXO40Q9UH90 709 aa25.85■■□□□ 1.73
LRRK1-208ENST00000532029 ZBTB5O15062 677 aa25.84■■□□□ 1.73
LRRK1-208ENST00000532029 CDC27P30260 824 aa25.84■■□□□ 1.73
LRRK1-208ENST00000532029 CCT2P78371 535 aaKnown RBP25.84■■□□□ 1.73
LRRK1-208ENST00000532029 FBXO11Q86XK2 927 aa25.84■■□□□ 1.73
LRRK1-208ENST00000532029 CCDC82Q8N4S0 544 aa25.84■■□□□ 1.73
LRRK1-208ENST00000532029 CHST13Q8NET6 341 aa25.84■■□□□ 1.73
LRRK1-208ENST00000532029 IL27Q8NEV9 243 aa25.84■■□□□ 1.73
LRRK1-208ENST00000532029 PIBF1Q8WXW3 757 aa25.84■■□□□ 1.73
LRRK1-208ENST00000532029 MTMR8Q96EF0 704 aa25.84■■□□□ 1.73
LRRK1-208ENST00000532029 RRP36Q96EU6 259 aaKnown RBP25.84■■□□□ 1.73
LRRK1-208ENST00000532029 HOMER2Q9NSB8 354 aa25.84■■□□□ 1.73
LRRK1-208ENST00000532029 RIPK3Q9Y572 518 aa25.84■■□□□ 1.73
LRRK1-208ENST00000532029 ZSWIM8A7E2V4 1837 aa25.84■■□□□ 1.73
LRRK1-208ENST00000532029 MGAMO43451 1857 aa25.83■■□□□ 1.73
LRRK1-208ENST00000532029 ADD1P35611 737 aaKnown RBP25.83■■□□□ 1.73
LRRK1-208ENST00000532029 PRMT2P55345 433 aa25.83■■□□□ 1.73
LRRK1-208ENST00000532029 STK3Q13188 491 aa25.83■■□□□ 1.73
LRRK1-208ENST00000532029 TRERF1Q96PN7 1200 aa25.83■■□□□ 1.73
LRRK1-208ENST00000532029 SLKQ9H2G2 1235 aaPredicted RBP25.83■■□□□ 1.73
LRRK1-208ENST00000532029 RNF146Q9NTX7 359 aa25.83■■□□□ 1.73
LRRK1-208ENST00000532029 FAM217BQ9NTX9 383 aaPredicted RBP25.83■■□□□ 1.73
LRRK1-208ENST00000532029 SEC63Q9UGP8 760 aaKnown RBP25.83■■□□□ 1.73
LRRK1-208ENST00000532029 SRRDQ9UH36 339 aa25.83■■□□□ 1.73
LRRK1-208ENST00000532029 TPCN1Q9ULQ1 816 aa25.83■■□□□ 1.73
LRRK1-208ENST00000532029 SLC15A5A6NIM6 579 aa25.82■■□□□ 1.72
LRRK1-208ENST00000532029 STRNO43815 780 aa25.82■■□□□ 1.72
LRRK1-208ENST00000532029 ST18O60284 1047 aa25.82■■□□□ 1.72
LRRK1-208ENST00000532029 FCER1AP12319 257 aa25.82■■□□□ 1.72
LRRK1-208ENST00000532029 PTPREP23469 700 aa25.82■■□□□ 1.72
LRRK1-208ENST00000532029 TRAF1Q13077 416 aa25.82■■□□□ 1.72
LRRK1-208ENST00000532029 USH1GQ495M9 461 aa25.82■■□□□ 1.72
LRRK1-208ENST00000532029 MMP19Q99542 508 aa25.82■■□□□ 1.72
LRRK1-208ENST00000532029 NUDT12Q9BQG2 462 aa25.82■■□□□ 1.72
LRRK1-208ENST00000532029 AMNQ9BXJ7 453 aa25.82■■□□□ 1.72
LRRK1-208ENST00000532029 ACAD9Q9H845 621 aa25.82■■□□□ 1.72
LRRK1-208ENST00000532029 PNMA6FA0A0J9YX94 578 aa25.81■■□□□ 1.72
LRRK1-208ENST00000532029 PRKCZQ05513 592 aa25.81■■□□□ 1.72
LRRK1-208ENST00000532029 KCTD2Q14681 263 aa25.81■■□□□ 1.72
LRRK1-208ENST00000532029 SOCS4Q8WXH5 440 aa25.81■■□□□ 1.72
LRRK1-208ENST00000532029 NCOA5Q9HCD5 579 aaKnown RBP25.81■■□□□ 1.72
LRRK1-208ENST00000532029 CPLX1O14810 134 aa25.8■■□□□ 1.72
LRRK1-208ENST00000532029 TAL1P17542 331 aaPredicted RBP25.8■■□□□ 1.72
LRRK1-208ENST00000532029 CPLX2Q6PUV4 134 aaKnown RBP25.8■■□□□ 1.72
LRRK1-208ENST00000532029 ABCB11O95342 1321 aa25.8■■□□□ 1.72
LRRK1-208ENST00000532029 CNTNAP5Q8WYK1 1306 aa25.8■■□□□ 1.72
LRRK1-208ENST00000532029 PFKFB2O60825 505 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms