RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ASIC4Q96FT7 647 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 MYRFLQ96LU7 910 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 Q96M66 194 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 TARS2Q9BW92 718 aaKnown RBP4.2□□□□□ -1.74
CD44-234ENST00000531873 CEP41Q9BYV8 373 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 PRDM14Q9GZV8 571 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 NOL6Q9H6R4 1146 aaKnown RBP4.2□□□□□ -1.74
CD44-234ENST00000531873 C7orf69Q9H7B7 122 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 SLC52A2Q9HAB3 445 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 METTL14Q9HCE5 456 aaKnown RBP4.2□□□□□ -1.74
CD44-234ENST00000531873 PRDM10Q9NQV6 1147 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 C1GALT1Q9NS00 363 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 AKT3Q9Y243 479 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 PCDHB12Q9Y5F1 795 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 FHOD1Q9Y613 1164 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 LEFTY1O75610 366 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 KCNH1O95259 989 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 PDGFRBP09619 1106 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 ITGB5P18084 799 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 GFRA1P56159 465 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 GTF2IRD2BQ6EKJ0 949 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 BRAPQ7Z569 592 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 TMC3Q7Z5M5 1100 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 FGD2Q7Z6J4 655 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 GTF2IRD2Q86UP8 949 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 LRRTM3Q86VH5 581 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 AFAP1L2Q8N4X5 818 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 FIBCD1Q8N539 461 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 TOP6BLQ8N6T0 577 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 SYTL5Q8TDW5 730 aaPredicted RBP4.19□□□□□ -1.74
CD44-234ENST00000531873 DUSP23Q9BVJ7 150 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 NKX2-4Q9H2Z4 354 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 CAAP1Q9H8G2 361 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 TYW1Q9NV66 732 aaKnown RBP4.19□□□□□ -1.74
CD44-234ENST00000531873 INTS7Q9NVH2 962 aaKnown RBP4.19□□□□□ -1.74
CD44-234ENST00000531873 GFOD1Q9NXC2 390 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 PRR13Q9NZ81 148 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 SFMBT1Q9UHJ3 866 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 MINPP1Q9UNW1 487 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 ATP8A1Q9Y2Q0 1164 aa4.19□□□□□ -1.74
CD44-234ENST00000531873 A0A087WZG4 1122 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.18□□□□□ -1.74
CD44-234ENST00000531873 BLACEA4D250 179 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 NOP56O00567 594 aaKnown RBP4.18□□□□□ -1.74
CD44-234ENST00000531873 SART1O43290 800 aaKnown RBP4.18□□□□□ -1.74
CD44-234ENST00000531873 PARNO95453 639 aaKnown RBP4.18□□□□□ -1.74
CD44-234ENST00000531873 SCG5P05408 212 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 BMP3P12645 472 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 JUNBP17275 347 aaPredicted RBP4.18□□□□□ -1.74
CD44-234ENST00000531873 MAP4P27816 1152 aaKnown RBP4.18□□□□□ -1.74
CD44-234ENST00000531873 CNGA1P29973 690 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 USP11P51784 963 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 EVA1CP58658 441 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 MAP4K2Q12851 820 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 GRB10Q13322 594 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 MAP7Q14244 749 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 PPP2R5DQ14738 602 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 PRSS53Q2L4Q9 553 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 SLC35F1Q5T1Q4 408 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 POMZP3Q6PJE2 187 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 FAM214BQ7L5A3 538 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 DDX42Q86XP3 938 aaKnown RBP eCLIP4.18□□□□□ -1.74
CD44-234ENST00000531873 FAM20CQ8IXL6 584 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 CRACR2BQ8N4Y2 399 aaPredicted RBP4.18□□□□□ -1.74
CD44-234ENST00000531873 UBR7Q8N806 425 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 DTWD2Q8NBA8 298 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 TMEM145Q8NBT3 493 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 GATA6Q92908 595 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 SCLYQ96I15 445 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 MCMBPQ9BTE3 642 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 YIPF2Q9BWQ6 316 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 MAGEC2Q9UBF1 373 aaPredicted RBP4.18□□□□□ -1.74
CD44-234ENST00000531873 FBXL21Q9UKT6 434 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 MAPRE3Q9UPY8 281 aa4.18□□□□□ -1.74
CD44-234ENST00000531873 SHISA3A0PJX4 238 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 HMX2A2RU54 273 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 KRTAP9-7A8MTY7 169 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 PRR33A8MZF0 331 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 H0Y8X5 98 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 SIGLEC6O43699 453 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 PRAMEF1O95521 474 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 SOX5P35711 763 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 CTSKP43235 329 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 ZNF460Q14592 562 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 DENND5AQ6IQ26 1287 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 SPOCD1Q6ZMY3 1216 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 STRA8Q7Z7C7 330 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 CLEC10AQ8IUN9 316 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 UTP4Q969X6 686 aaKnown RBP4.17□□□□□ -1.74
CD44-234ENST00000531873 ZDHHC15Q96MV8 337 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 HOMER2Q9NSB8 354 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 NDOR1Q9UHB4 597 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 GPR55Q9Y2T6 319 aaPredicted RBP4.17□□□□□ -1.74
CD44-234ENST00000531873 TNPO3Q9Y5L0 923 aaKnown RBP4.17□□□□□ -1.74
CD44-234ENST00000531873 ASXL2Q76L83 1435 aa4.17□□□□□ -1.74
CD44-234ENST00000531873 FAM95CA0A1B0GW59 222 aa4.16□□□□□ -1.74
CD44-234ENST00000531873 VAMP4O75379 141 aa4.16□□□□□ -1.74
CD44-234ENST00000531873 EYA4O95677 639 aa4.16□□□□□ -1.74
CD44-234ENST00000531873 SNRPB2P08579 225 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms