RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 CNTNAP5Q8WYK1 1306 aa21.53■■□□□ 1.04
LTBP3-217ENST00000530785 FOXN1O15353 648 aa21.53■■□□□ 1.04
LTBP3-217ENST00000530785 HNRNPH1P31943 449 aaKnown RBP21.53■■□□□ 1.04
LTBP3-217ENST00000530785 SLC4A8Q2Y0W8 1093 aa21.53■■□□□ 1.04
LTBP3-217ENST00000530785 ZC3H4Q9UPT8 1303 aaKnown RBP21.53■■□□□ 1.04
LTBP3-217ENST00000530785 NR1I3Q14994 352 aa21.53■■□□□ 1.04
LTBP3-217ENST00000530785 EARS2Q5JPH6 523 aaKnown RBP21.53■■□□□ 1.04
LTBP3-217ENST00000530785 SPTY2D1Q68D10 685 aaPredicted RBP21.53■■□□□ 1.04
LTBP3-217ENST00000530785 RASGRP2Q7LDG7 609 aa21.53■■□□□ 1.04
LTBP3-217ENST00000530785 PCDHA5Q9Y5H7 936 aa21.53■■□□□ 1.04
LTBP3-217ENST00000530785 KIF1CO43896 1103 aaKnown RBP21.52■■□□□ 1.04
LTBP3-217ENST00000530785 TFRCP02786 760 aaKnown RBP21.52■■□□□ 1.04
LTBP3-217ENST00000530785 KRT2P35908 639 aa21.52■■□□□ 1.04
LTBP3-217ENST00000530785 KCNV1Q6PIU1 500 aa21.52■■□□□ 1.04
LTBP3-217ENST00000530785 TMED8Q6PL24 325 aaPredicted RBP21.52■■□□□ 1.04
LTBP3-217ENST00000530785 RPAINQ86UA6 219 aa21.52■■□□□ 1.04
LTBP3-217ENST00000530785 NOA1Q8NC60 698 aaKnown RBP21.52■■□□□ 1.04
LTBP3-217ENST00000530785 MCM9Q9NXL9 1143 aa21.52■■□□□ 1.04
LTBP3-217ENST00000530785 CEP131Q9UPN4 1083 aa21.52■■□□□ 1.04
LTBP3-217ENST00000530785 USP17L8P0C7I0 530 aa21.52■■□□□ 1.04
LTBP3-217ENST00000530785 HSP90AA4PQ58FG1 418 aa21.52■■□□□ 1.04
LTBP3-217ENST00000530785 SLC35F6Q8N357 371 aa21.52■■□□□ 1.04
LTBP3-217ENST00000530785 ZNF622Q969S3 477 aaKnown RBP eCLIP21.52■■□□□ 1.04
LTBP3-217ENST00000530785 NFE2L3Q9Y4A8 694 aa21.52■■□□□ 1.04
LTBP3-217ENST00000530785 SRPRBQ9Y5M8 271 aaKnown RBP21.52■■□□□ 1.04
LTBP3-217ENST00000530785 IGSF22Q8N9C0 903 aa21.51■■□□□ 1.03
LTBP3-217ENST00000530785 ENOX1Q8TC92 643 aaKnown RBP21.51■■□□□ 1.03
LTBP3-217ENST00000530785 CNKSR2Q8WXI2 1034 aa21.51■■□□□ 1.03
LTBP3-217ENST00000530785 GPR101Q96P66 508 aaPredicted RBP21.51■■□□□ 1.03
LTBP3-217ENST00000530785 NAPGQ99747 312 aaPredicted RBP21.51■■□□□ 1.03
LTBP3-217ENST00000530785 HPCAL4Q9UM19 191 aa21.51■■□□□ 1.03
LTBP3-217ENST00000530785 LEMD3Q9Y2U8 911 aa21.51■■□□□ 1.03
LTBP3-217ENST00000530785 XDHP47989 1333 aa21.51■■□□□ 1.03
LTBP3-217ENST00000530785 TSPY2A6NKD2 308 aa21.51■■□□□ 1.03
LTBP3-217ENST00000530785 LDHBP07195 334 aaKnown RBP21.51■■□□□ 1.03
LTBP3-217ENST00000530785 USP8P40818 1118 aa21.51■■□□□ 1.03
LTBP3-217ENST00000530785 LIG3P49916 1009 aa21.51■■□□□ 1.03
LTBP3-217ENST00000530785 MDM2Q00987 491 aaPredicted RBP21.51■■□□□ 1.03
LTBP3-217ENST00000530785 ELOA2Q8IYF1 753 aaPredicted RBP21.51■■□□□ 1.03
LTBP3-217ENST00000530785 SRBD1Q8N5C6 995 aaKnown RBP21.51■■□□□ 1.03
LTBP3-217ENST00000530785 ZNF579Q8NAF0 562 aaKnown RBP21.51■■□□□ 1.03
LTBP3-217ENST00000530785 POLR2DO15514 142 aaKnown RBP21.5■■□□□ 1.03
LTBP3-217ENST00000530785 MYCNP04198 464 aaPredicted RBP21.5■■□□□ 1.03
LTBP3-217ENST00000530785 FMR1Q06787 632 aaKnown RBP eCLIP21.5■■□□□ 1.03
LTBP3-217ENST00000530785 BANK1Q8NDB2 785 aa21.5■■□□□ 1.03
LTBP3-217ENST00000530785 WDR66Q8TBY9 1149 aa21.5■■□□□ 1.03
LTBP3-217ENST00000530785 FAM169AQ9Y6X4 670 aa21.5■■□□□ 1.03
LTBP3-217ENST00000530785 NPY5RQ15761 445 aa21.5■■□□□ 1.03
LTBP3-217ENST00000530785 GRIK5Q16478 980 aa21.5■■□□□ 1.03
LTBP3-217ENST00000530785 PRR5LQ6MZQ0 368 aa21.5■■□□□ 1.03
LTBP3-217ENST00000530785 CSRNP2Q9H175 543 aa21.5■■□□□ 1.03
LTBP3-217ENST00000530785 A0A1B0GTH6 734 aa21.49■■□□□ 1.03
LTBP3-217ENST00000530785 TRIM75PA6NK02 468 aa21.49■■□□□ 1.03
LTBP3-217ENST00000530785 MNAT1P51948 309 aa21.49■■□□□ 1.03
LTBP3-217ENST00000530785 DIXDC1Q155Q3 683 aa21.49■■□□□ 1.03
LTBP3-217ENST00000530785 RCSD1Q6JBY9 416 aa21.49■■□□□ 1.03
LTBP3-217ENST00000530785 USP49Q70CQ1 688 aa21.49■■□□□ 1.03
LTBP3-217ENST00000530785 PROM2Q8N271 834 aa21.49■■□□□ 1.03
LTBP3-217ENST00000530785 SERTAD1Q9UHV2 236 aa21.49■■□□□ 1.03
LTBP3-217ENST00000530785 POSTNQ15063 836 aa21.49■■□□□ 1.03
LTBP3-217ENST00000530785 SH3RF3Q8TEJ3 882 aaPredicted RBP21.49■■□□□ 1.03
LTBP3-217ENST00000530785 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.48■■□□□ 1.03
LTBP3-217ENST00000530785 WNT7AO00755 349 aa21.48■■□□□ 1.03
LTBP3-217ENST00000530785 AMPD2Q01433 879 aa21.48■■□□□ 1.03
LTBP3-217ENST00000530785 TNFRSF25Q93038 417 aa21.48■■□□□ 1.03
LTBP3-217ENST00000530785 HOOK1Q9UJC3 728 aaKnown RBP21.48■■□□□ 1.03
LTBP3-217ENST00000530785 TTF2Q9UNY4 1162 aaKnown RBP21.48■■□□□ 1.03
LTBP3-217ENST00000530785 BAZ2BQ9UIF8 2168 aaKnown RBP21.48■■□□□ 1.03
LTBP3-217ENST00000530785 UBR3Q6ZT12 1888 aa21.48■■□□□ 1.03
LTBP3-217ENST00000530785 EBAG9O00559 213 aa21.48■■□□□ 1.03
LTBP3-217ENST00000530785 CCT5P48643 541 aa21.48■■□□□ 1.03
LTBP3-217ENST00000530785 C12orf60Q5U649 245 aa21.48■■□□□ 1.03
LTBP3-217ENST00000530785 ZNF804AQ7Z570 1209 aa21.48■■□□□ 1.03
LTBP3-217ENST00000530785 MAN1B1Q9UKM7 699 aa21.48■■□□□ 1.03
LTBP3-217ENST00000530785 SUFUQ9UMX1 484 aa21.48■■□□□ 1.03
LTBP3-217ENST00000530785 APBA3O96018 575 aa21.47■■□□□ 1.03
LTBP3-217ENST00000530785 FECHP22830 423 aa21.47■■□□□ 1.03
LTBP3-217ENST00000530785 POTEDQ86YR6 584 aa21.47■■□□□ 1.03
LTBP3-217ENST00000530785 MLKLQ8NB16 471 aa21.47■■□□□ 1.03
LTBP3-217ENST00000530785 MYO1AQ9UBC5 1043 aa21.47■■□□□ 1.03
LTBP3-217ENST00000530785 NAV1Q8NEY1 1877 aa21.47■■□□□ 1.03
LTBP3-217ENST00000530785 ACTN4O43707 911 aaKnown RBP21.47■■□□□ 1.03
LTBP3-217ENST00000530785 MAP9Q49MG5 647 aa21.47■■□□□ 1.03
LTBP3-217ENST00000530785 FBXW10Q5XX13 1052 aa21.47■■□□□ 1.03
LTBP3-217ENST00000530785 GRAMD1CQ8IYS0 662 aa21.47■■□□□ 1.03
LTBP3-217ENST00000530785 DYNLL2Q96FJ2 89 aa21.47■■□□□ 1.03
LTBP3-217ENST00000530785 ADRA2BP18089 450 aa21.46■■□□□ 1.03
LTBP3-217ENST00000530785 MCM3P25205 808 aa21.46■■□□□ 1.03
LTBP3-217ENST00000530785 IRAK1P51617 712 aa21.46■■□□□ 1.03
LTBP3-217ENST00000530785 USP14P54578 494 aa21.46■■□□□ 1.03
LTBP3-217ENST00000530785 GPSM2P81274 684 aa21.46■■□□□ 1.03
LTBP3-217ENST00000530785 RBL2Q08999 1139 aa21.46■■□□□ 1.03
LTBP3-217ENST00000530785 CCDC148Q8NFR7 591 aa21.46■■□□□ 1.03
LTBP3-217ENST00000530785 COG1Q8WTW3 980 aa21.46■■□□□ 1.03
LTBP3-217ENST00000530785 RPGRQ92834 1020 aaKnown RBP21.46■■□□□ 1.03
LTBP3-217ENST00000530785 MED15Q96RN5 788 aa21.46■■□□□ 1.03
LTBP3-217ENST00000530785 KAT14Q9H8E8 782 aa21.46■■□□□ 1.03
LTBP3-217ENST00000530785 A1CFQ9NQ94 594 aaKnown RBP21.46■■□□□ 1.03
LTBP3-217ENST00000530785 DACH1Q9UI36 760 aa21.46■■□□□ 1.03
LTBP3-217ENST00000530785 SCG2P13521 617 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms