RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 ZNF536O15090 1300 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 PRPF3O43395 683 aaKnown RBP13.26□□□□□ -0.29
CAPN1-217ENST00000529133 CA12O43570 354 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 PEX10O60683 326 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 PPP1R11O60927 126 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-217ENST00000529133 ANP32AP39687 249 aaKnown RBP13.26□□□□□ -0.29
CAPN1-217ENST00000529133 GCLCP48506 637 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-217ENST00000529133 SSRP1Q08945 709 aaKnown RBP13.26□□□□□ -0.29
CAPN1-217ENST00000529133 CRHR2Q13324 411 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 TMEM132BQ14DG7 1078 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 TRIM22Q8IYM9 498 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 SMARCC2Q8TAQ2 1214 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 PAGR1Q9BTK6 254 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 ZFYVE28Q9HCC9 887 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 RAVER2Q9HCJ3 691 aaKnown RBP13.26□□□□□ -0.29
CAPN1-217ENST00000529133 TXNRD2Q9NNW7 524 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 BTBD7Q9P203 1132 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 RBPJLQ9UBG7 517 aa13.26□□□□□ -0.29
CAPN1-217ENST00000529133 PNMA6FA0A0J9YX94 578 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 ATP2A1O14983 1001 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 ICAM1P05362 532 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 FDPSP14324 419 aaKnown RBP13.25□□□□□ -0.29
CAPN1-217ENST00000529133 TAL1P17542 331 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-217ENST00000529133 OAZ1P54368 228 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 AKAP17AQ02040 695 aaKnown RBP13.25□□□□□ -0.29
CAPN1-217ENST00000529133 BECN1Q14457 450 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 PKN1Q16512 942 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 CPXCR1Q8N123 301 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 ANKRD13CQ8N6S4 541 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 DDX11Q96FC9 970 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 RNF186Q9NXI6 227 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 RBM27Q9P2N5 1060 aaKnown RBP13.25□□□□□ -0.29
CAPN1-217ENST00000529133 ORC3Q9UBD5 711 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-217ENST00000529133 MORF4L1Q9UBU8 362 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 SEC63Q9UGP8 760 aaKnown RBP13.25□□□□□ -0.29
CAPN1-217ENST00000529133 CPA4Q9UI42 421 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 ZNF214Q9UL59 606 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-217ENST00000529133 RABGAP1Q9Y3P9 1069 aa13.25□□□□□ -0.29
CAPN1-217ENST00000529133 CTDP1Q9Y5B0 961 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-217ENST00000529133 TLR2O60603 784 aa13.24□□□□□ -0.29
CAPN1-217ENST00000529133 DEXIO95424 95 aa13.24□□□□□ -0.29
CAPN1-217ENST00000529133 BCRP11274 1271 aa13.24□□□□□ -0.29
CAPN1-217ENST00000529133 SCG2P13521 617 aa13.24□□□□□ -0.29
CAPN1-217ENST00000529133 PFKFB3Q16875 520 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-217ENST00000529133 FBXO11Q86XK2 927 aa13.24□□□□□ -0.29
CAPN1-217ENST00000529133 INTS4Q96HW7 963 aaKnown RBP13.24□□□□□ -0.29
CAPN1-217ENST00000529133 AGBL1Q96MI9 1066 aa13.24□□□□□ -0.29
CAPN1-217ENST00000529133 AMNQ9BXJ7 453 aa13.24□□□□□ -0.29
CAPN1-217ENST00000529133 CFHR5Q9BXR6 569 aa13.24□□□□□ -0.29
CAPN1-217ENST00000529133 TEX13BQ9BXU2 312 aa13.24□□□□□ -0.29
CAPN1-217ENST00000529133 R3HDMLQ9H3Y0 253 aa13.24□□□□□ -0.29
CAPN1-217ENST00000529133 CCPG1Q9ULG6 757 aa13.24□□□□□ -0.29
CAPN1-217ENST00000529133 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-217ENST00000529133 TRPA1O75762 1119 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 STAT3P40763 770 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 ERVK-9P63128 1117 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 ERVK-24P63145 666 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 HMGN5P82970 282 aaKnown RBP13.23□□□□□ -0.29
CAPN1-217ENST00000529133 PLS1Q14651 629 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 FAM110CQ1W6H9 321 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 WWC2Q6AWC2 1192 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 SNRNP48Q6IEG0 339 aaKnown RBP13.23□□□□□ -0.29
CAPN1-217ENST00000529133 C17orf99Q6UX52 265 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 HEATR3Q7Z4Q2 680 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 GPRC5AQ8NFJ5 357 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 GPKOWQ92917 476 aaPredicted RBP eCLIP13.23□□□□□ -0.29
CAPN1-217ENST00000529133 AIFM3Q96NN9 605 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 SPATC1LQ9H0A9 340 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 SAGE1Q9NXZ1 904 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 PNMA2Q9UL42 364 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 SMC3Q9UQE7 1217 aa13.23□□□□□ -0.29
CAPN1-217ENST00000529133 ABCB11O95342 1321 aa13.22□□□□□ -0.29
CAPN1-217ENST00000529133 hCG_1984214I3L0E3 225 aa13.22□□□□□ -0.29
CAPN1-217ENST00000529133 STXBP3O00186 592 aa13.22□□□□□ -0.29
CAPN1-217ENST00000529133 TBC1D8O95759 1140 aa13.22□□□□□ -0.29
CAPN1-217ENST00000529133 MAP2K1Q02750 393 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-217ENST00000529133 Q3C1V9 767 aa13.22□□□□□ -0.29
CAPN1-217ENST00000529133 USH1GQ495M9 461 aa13.22□□□□□ -0.29
CAPN1-217ENST00000529133 RIOX2Q8IUF8 465 aa13.22□□□□□ -0.29
CAPN1-217ENST00000529133 ZNF713Q8N859 430 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-217ENST00000529133 COA7Q96BR5 231 aa13.22□□□□□ -0.29
CAPN1-217ENST00000529133 SHISA4Q96DD7 197 aa13.22□□□□□ -0.29
CAPN1-217ENST00000529133 MOV10L1Q9BXT6 1211 aaKnown RBP13.22□□□□□ -0.29
CAPN1-217ENST00000529133 RIPK3Q9Y572 518 aa13.22□□□□□ -0.29
CAPN1-217ENST00000529133 ALAS1P13196 640 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 GJB2P29033 226 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 SLC4A3P48751 1232 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 TRAF1Q13077 416 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 TKFCQ3LXA3 575 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 TYW1BQ6NUM6 668 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 SHCBP1Q8NEM2 672 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 WASF1Q92558 559 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 ALG1Q9BT22 464 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 RNF146Q9NTX7 359 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 BARHL2Q9NY43 387 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.29
CAPN1-217ENST00000529133 COL11A1P12107 1806 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-217ENST00000529133 SLC25A27O95847 323 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms