RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 SENP2Q9HC62 589 aa19.88■□□□□ 0.77
LTBP3-210ENST00000528516 CYLC1P35663 651 aaPredicted RBP19.88■□□□□ 0.77
LTBP3-210ENST00000528516 PLCD1P51178 756 aa19.88■□□□□ 0.77
LTBP3-210ENST00000528516 AMPD3Q01432 767 aa19.88■□□□□ 0.77
LTBP3-210ENST00000528516 NR1I3Q14994 352 aa19.88■□□□□ 0.77
LTBP3-210ENST00000528516 E2F5Q15329 346 aa19.88■□□□□ 0.77
LTBP3-210ENST00000528516 NOC4LQ9BVI4 516 aaKnown RBP19.88■□□□□ 0.77
LTBP3-210ENST00000528516 TFR2Q9UP52 801 aa19.88■□□□□ 0.77
LTBP3-210ENST00000528516 ARHGAP25P42331 645 aa19.87■□□□□ 0.77
LTBP3-210ENST00000528516 TTLL11Q8NHH1 800 aa19.87■□□□□ 0.77
LTBP3-210ENST00000528516 SYMPKQ92797 1274 aaKnown RBP19.87■□□□□ 0.77
LTBP3-210ENST00000528516 CCDC87Q9NVE4 849 aa19.87■□□□□ 0.77
LTBP3-210ENST00000528516 ZBTB21Q9ULJ3 1066 aa19.87■□□□□ 0.77
LTBP3-210ENST00000528516 NEDD4P46934 1319 aa19.87■□□□□ 0.77
LTBP3-210ENST00000528516 EIF3HO15372 352 aaKnown RBP eCLIP19.87■□□□□ 0.77
LTBP3-210ENST00000528516 NLRP10Q86W26 655 aa19.87■□□□□ 0.77
LTBP3-210ENST00000528516 IFT88Q13099 833 aa19.87■□□□□ 0.77
LTBP3-210ENST00000528516 ZYXQ15942 572 aaKnown RBP19.87■□□□□ 0.77
LTBP3-210ENST00000528516 NELFBQ8WX92 580 aa19.87■□□□□ 0.77
LTBP3-210ENST00000528516 RMND1Q9NWS8 449 aa19.87■□□□□ 0.77
LTBP3-210ENST00000528516 NRKQ7Z2Y5 1582 aa19.87■□□□□ 0.77
LTBP3-210ENST00000528516 SPAG1Q07617 926 aa19.86■□□□□ 0.77
LTBP3-210ENST00000528516 KCNV1Q6PIU1 500 aa19.86■□□□□ 0.77
LTBP3-210ENST00000528516 MAEAQ7L5Y9 396 aa19.86■□□□□ 0.77
LTBP3-210ENST00000528516 CTNNBL1Q8WYA6 563 aaPredicted RBP19.86■□□□□ 0.77
LTBP3-210ENST00000528516 SALL1Q9NSC2 1324 aa19.86■□□□□ 0.77
LTBP3-210ENST00000528516 CHUKO15111 745 aa19.86■□□□□ 0.77
LTBP3-210ENST00000528516 GSCP56915 257 aaPredicted RBP19.86■□□□□ 0.77
LTBP3-210ENST00000528516 WDR93Q6P2C0 686 aa19.86■□□□□ 0.77
LTBP3-210ENST00000528516 BIN2Q9UBW5 565 aaPredicted RBP19.86■□□□□ 0.77
LTBP3-210ENST00000528516 EPN1Q9Y6I3 576 aaPredicted RBP19.86■□□□□ 0.77
LTBP3-210ENST00000528516 ZMYM6O95789 1325 aa19.86■□□□□ 0.77
LTBP3-210ENST00000528516 ERVV-2B6SEH9 535 aa19.86■□□□□ 0.77
LTBP3-210ENST00000528516 H7C1W4 665 aa19.86■□□□□ 0.77
LTBP3-210ENST00000528516 EZRP15311 586 aaKnown RBP19.86■□□□□ 0.77
LTBP3-210ENST00000528516 ELF1P32519 619 aa19.86■□□□□ 0.77
LTBP3-210ENST00000528516 OXER1Q8TDS5 423 aa19.86■□□□□ 0.77
LTBP3-210ENST00000528516 ATP1A1P05023 1023 aaKnown RBP19.85■□□□□ 0.77
LTBP3-210ENST00000528516 CALML3P27482 149 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 ARID4AP29374 1257 aaPredicted RBP19.85■□□□□ 0.77
LTBP3-210ENST00000528516 ADD2P35612 726 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 PAK1Q13153 545 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 UFL1O94874 794 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 IFFO1Q0D2I5 559 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 DCAF17Q5H9S7 520 aaPredicted RBP19.85■□□□□ 0.77
LTBP3-210ENST00000528516 SPATA1Q5VX52 437 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 FNBP4Q8N3X1 1017 aaPredicted RBP19.85■□□□□ 0.77
LTBP3-210ENST00000528516 RTCBQ9Y3I0 505 aaKnown RBP19.85■□□□□ 0.77
LTBP3-210ENST00000528516 A0A1B0GTH6 734 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 KRT86O43790 486 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 NMT2O60551 498 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 RPSAP08865 295 aaKnown RBP19.85■□□□□ 0.77
LTBP3-210ENST00000528516 NEFHP12036 1026 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 SP4Q02446 784 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 RAPGEF1Q13905 1077 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 CCDC121Q6ZUS5 278 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 SH2D3CQ8N5H7 860 aa19.85■□□□□ 0.77
LTBP3-210ENST00000528516 PRPF6O94906 941 aaKnown RBP19.84■□□□□ 0.77
LTBP3-210ENST00000528516 SLC7A5Q01650 507 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 LMTK3Q96Q04 1460 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 HPDP32754 393 aaPredicted RBP19.84■□□□□ 0.77
LTBP3-210ENST00000528516 RPS8P62241 208 aaKnown RBP19.84■□□□□ 0.77
LTBP3-210ENST00000528516 SATB1Q01826 763 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 KRT79Q5XKE5 535 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 CNPY4Q8N129 248 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 MSL3Q8N5Y2 521 aaKnown RBP19.84■□□□□ 0.77
LTBP3-210ENST00000528516 HPSEQ9Y251 543 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 RTL9Q8NET4 1388 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 SOS2Q07890 1332 aaPredicted RBP19.84■□□□□ 0.77
LTBP3-210ENST00000528516 MAP3K15Q6ZN16 1313 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 TNS3Q68CZ2 1445 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 GOLGA8KD6RF30 607 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 ALS2CR12Q96Q35 445 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 C6orf50Q9HD87 102 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 MYO1AQ9UBC5 1043 aa19.84■□□□□ 0.77
LTBP3-210ENST00000528516 ZNF185O15231 689 aa19.83■□□□□ 0.77
LTBP3-210ENST00000528516 CHMP2AO43633 222 aa19.83■□□□□ 0.77
LTBP3-210ENST00000528516 BMP15O95972 392 aa19.83■□□□□ 0.77
LTBP3-210ENST00000528516 GUCY1A2P33402 732 aa19.83■□□□□ 0.77
LTBP3-210ENST00000528516 TECP42680 631 aa19.83■□□□□ 0.77
LTBP3-210ENST00000528516 AARSP49588 968 aaKnown RBP eCLIP19.83■□□□□ 0.77
LTBP3-210ENST00000528516 SYCP3Q8IZU3 236 aa19.83■□□□□ 0.77
LTBP3-210ENST00000528516 PLCD4Q9BRC7 762 aa19.83■□□□□ 0.77
LTBP3-210ENST00000528516 ZNF18P17022 549 aa19.83■□□□□ 0.77
LTBP3-210ENST00000528516 DIXDC1Q155Q3 683 aa19.83■□□□□ 0.77
LTBP3-210ENST00000528516 CCDC51Q96ER9 411 aa19.83■□□□□ 0.77
LTBP3-210ENST00000528516 ZC3H12CQ9C0D7 883 aaKnown RBP19.83■□□□□ 0.77
LTBP3-210ENST00000528516 FRMPD2Q68DX3 1309 aaPredicted RBP19.83■□□□□ 0.77
LTBP3-210ENST00000528516 GRIN1Q05586 938 aa19.83■□□□□ 0.76
LTBP3-210ENST00000528516 DYNLL2Q96FJ2 89 aa19.83■□□□□ 0.76
LTBP3-210ENST00000528516 CHP1Q99653 195 aa19.83■□□□□ 0.76
LTBP3-210ENST00000528516 PLEKHA8P1O95397 391 aa19.83■□□□□ 0.76
LTBP3-210ENST00000528516 GYPCP04921 128 aa19.83■□□□□ 0.76
LTBP3-210ENST00000528516 TYW1BQ6NUM6 668 aa19.83■□□□□ 0.76
LTBP3-210ENST00000528516 RRP36Q96EU6 259 aaKnown RBP19.83■□□□□ 0.76
LTBP3-210ENST00000528516 TLDC2A0PJX2 215 aa19.82■□□□□ 0.76
LTBP3-210ENST00000528516 SF3B2Q13435 895 aaKnown RBP19.82■□□□□ 0.76
LTBP3-210ENST00000528516 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.82■□□□□ 0.76
LTBP3-210ENST00000528516 USP49Q70CQ1 688 aa19.82■□□□□ 0.76
LTBP3-210ENST00000528516 TRIM31Q9BZY9 425 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms