RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 NUP88Q99567 741 aaPredicted RBP13.15□□□□□ -0.3
NR1H3-230ENST00000527949 RNF41Q9H4P4 317 aaPredicted RBP13.15□□□□□ -0.3
NR1H3-230ENST00000527949 PDLIM7Q9NR12 457 aa13.15□□□□□ -0.3
NR1H3-230ENST00000527949 IL17RBQ9NRM6 502 aa13.15□□□□□ -0.3
NR1H3-230ENST00000527949 LAMA4Q16363 1823 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 RAD21O60216 631 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 CLTBP09497 229 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 RARBP10826 455 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 ADCYAP1R1P41586 468 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 STAT2P52630 851 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 LRRC41Q15345 812 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 TKFCQ3LXA3 575 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 SNRNP48Q6IEG0 339 aaKnown RBP13.14□□□□□ -0.31
NR1H3-230ENST00000527949 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 MAMDC4Q6UXC1 1216 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 LRRC47Q8N1G4 583 aaKnown RBP13.14□□□□□ -0.31
NR1H3-230ENST00000527949 RILPL2Q969X0 211 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 DSCC1Q9BVC3 393 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 TTYH1Q9H313 450 aaPredicted RBP13.14□□□□□ -0.31
NR1H3-230ENST00000527949 PHF24Q9UPV7 400 aa13.14□□□□□ -0.31
NR1H3-230ENST00000527949 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.13□□□□□ -0.31
NR1H3-230ENST00000527949 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.13□□□□□ -0.31
NR1H3-230ENST00000527949 RANBP6O60518 1105 aaKnown RBP13.13□□□□□ -0.31
NR1H3-230ENST00000527949 MYCNP04198 464 aaPredicted RBP13.13□□□□□ -0.31
NR1H3-230ENST00000527949 TOP1P11387 765 aaKnown RBP13.13□□□□□ -0.31
NR1H3-230ENST00000527949 RAG1P15918 1043 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 SLC1A4P43007 532 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 TLE2Q04725 743 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 CCDC178Q5BJE1 867 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 AKNAD1Q5T1N1 836 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 BTNL9Q6UXG8 535 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 TOX2Q96NM4 488 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 TINF2Q9BSI4 451 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 XPNPEP3Q9NQH7 507 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 DIAPH3Q9NSV4 1193 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 STX8Q9UNK0 236 aa13.13□□□□□ -0.31
NR1H3-230ENST00000527949 CTDP1Q9Y5B0 961 aaPredicted RBP13.13□□□□□ -0.31
NR1H3-230ENST00000527949 SMCHD1A6NHR9 2005 aa13.12□□□□□ -0.31
NR1H3-230ENST00000527949 TRIM43BA6NCK2 446 aa13.12□□□□□ -0.31
NR1H3-230ENST00000527949 TMEM232C9JQI7 657 aa13.12□□□□□ -0.31
NR1H3-230ENST00000527949 TNFRSF10AO00220 468 aa13.12□□□□□ -0.31
NR1H3-230ENST00000527949 KIAA0355O15063 1070 aa13.12□□□□□ -0.31
NR1H3-230ENST00000527949 FPGSQ05932 587 aa13.12□□□□□ -0.31
NR1H3-230ENST00000527949 MFSD6Q6ZSS7 791 aa13.12□□□□□ -0.31
NR1H3-230ENST00000527949 NUP133Q8WUM0 1156 aa13.12□□□□□ -0.31
NR1H3-230ENST00000527949 KIFC2Q96AC6 838 aa13.12□□□□□ -0.31
NR1H3-230ENST00000527949 TRIM43Q96BQ3 446 aaPredicted RBP13.12□□□□□ -0.31
NR1H3-230ENST00000527949 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
NR1H3-230ENST00000527949 RAD50Q92878 1312 aa13.12□□□□□ -0.31
NR1H3-230ENST00000527949 DCDC2CA8MYV0 355 aa13.11□□□□□ -0.31
NR1H3-230ENST00000527949 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
NR1H3-230ENST00000527949 ATXN2LQ8WWM7 1075 aaKnown RBP13.11□□□□□ -0.31
NR1H3-230ENST00000527949 ESR2Q92731 530 aa13.11□□□□□ -0.31
NR1H3-230ENST00000527949 TSEN34Q9BSV6 310 aaKnown RBP13.11□□□□□ -0.31
NR1H3-230ENST00000527949 INCENPQ9NQS7 918 aa13.11□□□□□ -0.31
NR1H3-230ENST00000527949 CTNNA3Q9UI47 895 aa13.11□□□□□ -0.31
NR1H3-230ENST00000527949 RIPK3Q9Y572 518 aa13.11□□□□□ -0.31
NR1H3-230ENST00000527949 MROH7Q68CQ1 1323 aa13.11□□□□□ -0.31
NR1H3-230ENST00000527949 ZNF213O14771 459 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 PGK2P07205 417 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 SNHG28P0DPA3 235 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 AKR1A1P14550 325 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 MCCP23508 829 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 DNAJB2P25686 324 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 PDE4AP27815 886 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 TTC22Q5TAA0 569 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 ANO1Q5XXA6 986 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 ANKRD33Q7Z3H0 272 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 SH3RF1Q7Z6J0 888 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 CPXCR1Q8N123 301 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 ANKS1AQ92625 1134 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 FERMT2Q96AC1 680 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 DDX11Q96FC9 970 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 TMEM47Q9BQJ4 181 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 MAF1Q9H063 256 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 RAVER2Q9HCJ3 691 aaKnown RBP13.1□□□□□ -0.31
NR1H3-230ENST00000527949 TMEM39AQ9NV64 488 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 LTBP2Q14767 1821 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 ZNF536O15090 1300 aa13.1□□□□□ -0.31
NR1H3-230ENST00000527949 VCANP13611 3396 aa13.09□□□□□ -0.31
NR1H3-230ENST00000527949 LOC102724159A0A0B4J2E5 919 aa13.09□□□□□ -0.31
NR1H3-230ENST00000527949 MOXD2PA6NHM9 499 aa13.09□□□□□ -0.31
NR1H3-230ENST00000527949 NMT2O60551 498 aa13.09□□□□□ -0.31
NR1H3-230ENST00000527949 ZNF865P0CJ78 1059 aaPredicted RBP13.09□□□□□ -0.31
NR1H3-230ENST00000527949 PWP2Q15269 919 aaKnown RBP13.09□□□□□ -0.31
NR1H3-230ENST00000527949 CWC27Q6UX04 472 aaKnown RBP13.09□□□□□ -0.31
NR1H3-230ENST00000527949 RUFY2Q8WXA3 655 aa13.09□□□□□ -0.31
NR1H3-230ENST00000527949 GAS2L1Q99501 681 aaPredicted RBP13.09□□□□□ -0.31
NR1H3-230ENST00000527949 ZNF576Q9H609 170 aa13.09□□□□□ -0.31
NR1H3-230ENST00000527949 ACAD9Q9H845 621 aa13.09□□□□□ -0.31
NR1H3-230ENST00000527949 TOMM22Q9NS69 142 aa13.09□□□□□ -0.31
NR1H3-230ENST00000527949 PRR12Q9ULL5 1215 aa13.09□□□□□ -0.31
NR1H3-230ENST00000527949 CNPY2Q9Y2B0 182 aa13.09□□□□□ -0.31
NR1H3-230ENST00000527949 A0A1W2PQ45 241 aaPredicted RBP13.08□□□□□ -0.32
NR1H3-230ENST00000527949 A0A1W2PQY0 241 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms