RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 USP17L2Q6R6M4 530 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 QTRT2Q9H974 415 aaKnown RBP17.32■□□□□ 0.36
USH1C-207ENST00000527720 TEX33O43247 280 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 KRT27Q7Z3Y8 459 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 IGSF22Q8N9C0 903 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 CCDC51Q96ER9 411 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 KBTBD4Q9NVX7 518 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 MTMR4Q9NYA4 1195 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 SWAP70Q9UH65 585 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 OR52Z1P0C646 297 aa17.31■□□□□ 0.36
USH1C-207ENST00000527720 NEK8Q86SG6 692 aa17.31■□□□□ 0.36
USH1C-207ENST00000527720 NELFBQ8WX92 580 aa17.31■□□□□ 0.36
USH1C-207ENST00000527720 SRRTQ9BXP5 876 aaKnown RBP17.31■□□□□ 0.36
USH1C-207ENST00000527720 GTPBP4Q9BZE4 634 aaKnown RBP17.31■□□□□ 0.36
USH1C-207ENST00000527720 IGKV6D-41A0A0C4DH26 115 aa17.31■□□□□ 0.36
USH1C-207ENST00000527720 H7C1D1 291 aa17.31■□□□□ 0.36
USH1C-207ENST00000527720 PDHBP11177 359 aa17.31■□□□□ 0.36
USH1C-207ENST00000527720 PPP4R3BQ5MIZ7 849 aa17.31■□□□□ 0.36
USH1C-207ENST00000527720 CNGA4Q8IV77 575 aa17.31■□□□□ 0.36
USH1C-207ENST00000527720 RASSF8Q8NHQ8 419 aa17.31■□□□□ 0.36
USH1C-207ENST00000527720 ZC3H12CQ9C0D7 883 aaKnown RBP17.31■□□□□ 0.36
USH1C-207ENST00000527720 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.31■□□□□ 0.36
USH1C-207ENST00000527720 TRIM37O94972 964 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 SNHG28P0DPA3 235 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 NPR1P16066 1061 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 CDC25AP30304 524 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 TXNRD1Q16881 649 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 NLGN1Q8N2Q7 840 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 DNAI1Q9UI46 699 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 RHOBTB3O94955 611 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 TPM1P09493 284 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 SRGNP10124 158 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 ALDH1B1P30837 517 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 HSPA1LP34931 641 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 STIM1Q13586 685 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 TRIM14Q14142 442 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 KRT31Q15323 416 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 ADSSL1Q8N142 457 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 REXO1Q8N1G1 1221 aaKnown RBP17.3■□□□□ 0.36
USH1C-207ENST00000527720 PIGSQ96S52 555 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 FEZ1Q99689 392 aa17.3■□□□□ 0.36
USH1C-207ENST00000527720 COL11A2P13942 1736 aaPredicted RBP17.29■□□□□ 0.36
USH1C-207ENST00000527720 CCNT1O60563 726 aaKnown RBP17.29■□□□□ 0.36
USH1C-207ENST00000527720 FECHP22830 423 aa17.29■□□□□ 0.36
USH1C-207ENST00000527720 PRCPP42785 496 aa17.29■□□□□ 0.36
USH1C-207ENST00000527720 RBL2Q08999 1139 aa17.29■□□□□ 0.36
USH1C-207ENST00000527720 TCP11X2Q5H9J9 407 aa17.29■□□□□ 0.36
USH1C-207ENST00000527720 HHIPL2Q6UWX4 724 aa17.29■□□□□ 0.36
USH1C-207ENST00000527720 RASGRP2Q7LDG7 609 aa17.29■□□□□ 0.36
USH1C-207ENST00000527720 CPVLQ9H3G5 476 aa17.29■□□□□ 0.36
USH1C-207ENST00000527720 RIMBP2O15034 1052 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 KLRC4O43908 158 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 MFAP3LO75121 409 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 LETM2Q2VYF4 491 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 PPP1R18Q6NYC8 613 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 CABP7Q86V35 215 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 SERPINB13Q9UIV8 391 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 PP2D1A8MPX8 630 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 KCNJ18B7U540 433 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 N4BP3O15049 544 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 PPP1R2P41236 205 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 COPB1P53618 953 aaKnown RBP17.28■□□□□ 0.36
USH1C-207ENST00000527720 KCNJ12Q14500 433 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 NAA30Q147X3 362 aaPredicted RBP17.28■□□□□ 0.36
USH1C-207ENST00000527720 PROM2Q8N271 834 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 GIMAP8Q8ND71 665 aaPredicted RBP17.28■□□□□ 0.36
USH1C-207ENST00000527720 CCDC47Q96A33 483 aaKnown RBP17.28■□□□□ 0.36
USH1C-207ENST00000527720 TTF2Q9UNY4 1162 aaKnown RBP17.28■□□□□ 0.36
USH1C-207ENST00000527720 GDAQ9Y2T3 454 aa17.28■□□□□ 0.36
USH1C-207ENST00000527720 TTLL1O95922 423 aa17.27■□□□□ 0.36
USH1C-207ENST00000527720 CCDC175P0C221 793 aa17.27■□□□□ 0.36
USH1C-207ENST00000527720 PICALMQ13492 652 aa17.27■□□□□ 0.36
USH1C-207ENST00000527720 KMT5BQ4FZB7 885 aa17.27■□□□□ 0.36
USH1C-207ENST00000527720 TOGARAM2Q6ZUX3 1019 aa17.27■□□□□ 0.36
USH1C-207ENST00000527720 CERS5Q8N5B7 392 aa17.27■□□□□ 0.36
USH1C-207ENST00000527720 ZNF397Q8NF99 534 aaPredicted RBP17.27■□□□□ 0.36
USH1C-207ENST00000527720 ADAMTSL1Q8N6G6 1762 aa17.27■□□□□ 0.36
USH1C-207ENST00000527720 PSMA7O14818 248 aa17.27■□□□□ 0.35
USH1C-207ENST00000527720 PDE6BP35913 854 aa17.27■□□□□ 0.35
USH1C-207ENST00000527720 TBCKQ8TEA7 893 aa17.27■□□□□ 0.35
USH1C-207ENST00000527720 NOC3LQ8WTT2 800 aaKnown RBP17.27■□□□□ 0.35
USH1C-207ENST00000527720 THAP9Q9H5L6 903 aa17.27■□□□□ 0.35
USH1C-207ENST00000527720 VAT1LQ9HCJ6 419 aa17.27■□□□□ 0.35
USH1C-207ENST00000527720 AKR1B1P15121 316 aa17.26■□□□□ 0.35
USH1C-207ENST00000527720 EEF1GP26641 437 aaKnown RBP17.26■□□□□ 0.35
USH1C-207ENST00000527720 AMPD3Q01432 767 aa17.26■□□□□ 0.35
USH1C-207ENST00000527720 DPP8Q6V1X1 898 aaPredicted RBP17.26■□□□□ 0.35
USH1C-207ENST00000527720 DHTKD1Q96HY7 919 aaPredicted RBP17.26■□□□□ 0.35
USH1C-207ENST00000527720 C7orf25Q9BPX7 421 aa17.26■□□□□ 0.35
USH1C-207ENST00000527720 UBA5Q9GZZ9 404 aa17.26■□□□□ 0.35
USH1C-207ENST00000527720 TMX4Q9H1E5 349 aaPredicted RBP17.26■□□□□ 0.35
USH1C-207ENST00000527720 DDX4Q9NQI0 724 aaKnown RBP17.26■□□□□ 0.35
USH1C-207ENST00000527720 USP40Q9NVE5 1235 aa17.26■□□□□ 0.35
USH1C-207ENST00000527720 GYPCP04921 128 aa17.26■□□□□ 0.35
USH1C-207ENST00000527720 PLCG1P19174 1290 aa17.26■□□□□ 0.35
USH1C-207ENST00000527720 ADCY7P51828 1080 aa17.26■□□□□ 0.35
USH1C-207ENST00000527720 HLA-DOAP06340 250 aa17.25■□□□□ 0.35
USH1C-207ENST00000527720 CASP14P31944 242 aa17.25■□□□□ 0.35
USH1C-207ENST00000527720 CCT6AP40227 531 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms