RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 APPP05067 770 aa19.21■□□□□ 0.67
PTPRU-210ENST00000527027 ZFYP08048 801 aaPredicted RBP19.21■□□□□ 0.67
PTPRU-210ENST00000527027 TDO2P48775 406 aa19.21■□□□□ 0.67
PTPRU-210ENST00000527027 GNASQ5JWF2 1037 aa19.21■□□□□ 0.67
PTPRU-210ENST00000527027 CCDC174Q6PII3 467 aa19.21■□□□□ 0.67
PTPRU-210ENST00000527027 GMCL1P1Q8NEA9 526 aa19.21■□□□□ 0.67
PTPRU-210ENST00000527027 SYMPKQ92797 1274 aaKnown RBP19.21■□□□□ 0.67
PTPRU-210ENST00000527027 GPATCH3Q96I76 525 aa19.21■□□□□ 0.67
PTPRU-210ENST00000527027 ZNF576Q9H609 170 aa19.21■□□□□ 0.67
PTPRU-210ENST00000527027 EPB41L4AQ9HCS5 686 aaPredicted RBP19.21■□□□□ 0.67
PTPRU-210ENST00000527027 A0A0U1RQG5 324 aaPredicted RBP19.2■□□□□ 0.66
PTPRU-210ENST00000527027 PATL2C9JE40 543 aaKnown RBP19.2■□□□□ 0.66
PTPRU-210ENST00000527027 ARVCFO00192 962 aa19.2■□□□□ 0.66
PTPRU-210ENST00000527027 GPAA1O43292 621 aa19.2■□□□□ 0.66
PTPRU-210ENST00000527027 ADCY6O43306 1168 aa19.2■□□□□ 0.66
PTPRU-210ENST00000527027 TTLL1O95922 423 aa19.2■□□□□ 0.66
PTPRU-210ENST00000527027 FDX1P10109 184 aa19.2■□□□□ 0.66
PTPRU-210ENST00000527027 PPIGQ13427 754 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTPRU-210ENST00000527027 C16orf59Q7L2K0 433 aa19.2■□□□□ 0.66
PTPRU-210ENST00000527027 ARMCX2Q7L311 632 aa19.2■□□□□ 0.66
PTPRU-210ENST00000527027 RCAN3Q9UKA8 241 aa19.2■□□□□ 0.66
PTPRU-210ENST00000527027 GREB1LQ9C091 1923 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-210ENST00000527027 BMP3P12645 472 aa19.19■□□□□ 0.66
PTPRU-210ENST00000527027 TMEM240Q5SV17 173 aa19.19■□□□□ 0.66
PTPRU-210ENST00000527027 SLFN13Q68D06 897 aa19.19■□□□□ 0.66
PTPRU-210ENST00000527027 CCDC144CPQ8IYA2 1237 aa19.19■□□□□ 0.66
PTPRU-210ENST00000527027 IFNL3Q8IZI9 196 aa19.19■□□□□ 0.66
PTPRU-210ENST00000527027 LRRC47Q8N1G4 583 aaKnown RBP19.19■□□□□ 0.66
PTPRU-210ENST00000527027 TMEM199Q8N511 208 aa19.19■□□□□ 0.66
PTPRU-210ENST00000527027 TIFAQ96CG3 184 aa19.19■□□□□ 0.66
PTPRU-210ENST00000527027 MYH7P12883 1935 aa19.18■□□□□ 0.66
PTPRU-210ENST00000527027 TLR3O15455 904 aaKnown RBP19.18■□□□□ 0.66
PTPRU-210ENST00000527027 CSF2RAP15509 400 aa19.18■□□□□ 0.66
PTPRU-210ENST00000527027 NKX3-2P78367 333 aa19.18■□□□□ 0.66
PTPRU-210ENST00000527027 CNTN2Q02246 1040 aa19.18■□□□□ 0.66
PTPRU-210ENST00000527027 C20orf194Q5TEA3 1177 aa19.18■□□□□ 0.66
PTPRU-210ENST00000527027 RASIP1Q5U651 963 aa19.18■□□□□ 0.66
PTPRU-210ENST00000527027 NEDD1Q8NHV4 660 aa19.18■□□□□ 0.66
PTPRU-210ENST00000527027 KATNBL1Q9H079 304 aa19.18■□□□□ 0.66
PTPRU-210ENST00000527027 DCTPP1Q9H773 170 aa19.18■□□□□ 0.66
PTPRU-210ENST00000527027 HOMER2Q9NSB8 354 aa19.18■□□□□ 0.66
PTPRU-210ENST00000527027 TMEM232C9JQI7 657 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 M0R2C6 588 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 CTAGE5O15320 804 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 TSPY3P0CV98 308 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 TSPY8P0CW00 308 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 PDE4BQ07343 736 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 LRRFIP1Q32MZ4 808 aaKnown RBP19.17■□□□□ 0.66
PTPRU-210ENST00000527027 TSHZ3Q63HK5 1081 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 DIEXFQ68CQ4 756 aaKnown RBP19.17■□□□□ 0.66
PTPRU-210ENST00000527027 FAM126BQ8IXS8 530 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 FAM133AQ8N9E0 248 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 CHURC1Q8WUH1 139 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 ACAD9Q9H845 621 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 CHD9Q3L8U1 2897 aa19.17■□□□□ 0.66
PTPRU-210ENST00000527027 TNFAIP2Q03169 654 aa19.16■□□□□ 0.66
PTPRU-210ENST00000527027 CCDC129Q6ZRS4 1044 aa19.16■□□□□ 0.66
PTPRU-210ENST00000527027 ZNF365Q70YC5 407 aa19.16■□□□□ 0.66
PTPRU-210ENST00000527027 NACAP1Q9BZK3 213 aa19.16■□□□□ 0.66
PTPRU-210ENST00000527027 PPP1R12CQ9BZL4 782 aa19.16■□□□□ 0.66
PTPRU-210ENST00000527027 PRDM6Q9NQX0 595 aa19.16■□□□□ 0.66
PTPRU-210ENST00000527027 ASB14A6NK59 587 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 GRXCR1A8MXD5 290 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 CD4P01730 458 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 SLC3A2P08195 630 aaKnown RBP19.15■□□□□ 0.66
PTPRU-210ENST00000527027 ACRP10323 421 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 STAT2P52630 851 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 BEX3Q00994 111 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 TFAP4Q01664 338 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 PSRC1Q6PGN9 363 aaPredicted RBP19.15■□□□□ 0.66
PTPRU-210ENST00000527027 NOL8Q76FK4 1167 aaKnown RBP19.15■□□□□ 0.66
PTPRU-210ENST00000527027 FAM160B2Q86V87 743 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 USP38Q8NB14 1042 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 SLC43A3Q8NBI5 491 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 STAG1Q8WVM7 1258 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 GMCL1Q96IK5 515 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 AGBL1Q96MI9 1066 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 PBX4Q9BYU1 374 aa19.15■□□□□ 0.66
PTPRU-210ENST00000527027 ISY1Q9ULR0 285 aaKnown RBP19.15■□□□□ 0.66
PTPRU-210ENST00000527027 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.14■□□□□ 0.65
PTPRU-210ENST00000527027 SOWAHBA6NEL2 793 aa19.14■□□□□ 0.65
PTPRU-210ENST00000527027 CABYRO75952 493 aa19.14■□□□□ 0.65
PTPRU-210ENST00000527027 PBX2P40425 430 aa19.14■□□□□ 0.65
PTPRU-210ENST00000527027 SLC1A4P43007 532 aa19.14■□□□□ 0.65
PTPRU-210ENST00000527027 TKFCQ3LXA3 575 aa19.14■□□□□ 0.65
PTPRU-210ENST00000527027 TJAP1Q5JTD0 557 aa19.14■□□□□ 0.65
PTPRU-210ENST00000527027 SEC62Q99442 399 aaKnown RBP19.14■□□□□ 0.65
PTPRU-210ENST00000527027 GAS2L1Q99501 681 aaPredicted RBP19.14■□□□□ 0.65
PTPRU-210ENST00000527027 IL23AQ9NPF7 189 aa19.14■□□□□ 0.65
PTPRU-210ENST00000527027 A1CFQ9NQ94 594 aaKnown RBP19.14■□□□□ 0.65
PTPRU-210ENST00000527027 RNF146Q9NTX7 359 aa19.14■□□□□ 0.65
PTPRU-210ENST00000527027 GNEQ9Y223 722 aaKnown RBP19.14■□□□□ 0.65
PTPRU-210ENST00000527027 ZNF536O15090 1300 aa19.14■□□□□ 0.65
PTPRU-210ENST00000527027 PLIN4Q96Q06 1357 aa19.14■□□□□ 0.65
PTPRU-210ENST00000527027 PLA2G6O60733 806 aa19.13■□□□□ 0.65
PTPRU-210ENST00000527027 MCCP23508 829 aa19.13■□□□□ 0.65
PTPRU-210ENST00000527027 CYP2C18P33260 490 aa19.13■□□□□ 0.65
PTPRU-210ENST00000527027 IKQ13123 557 aaPredicted RBP19.13■□□□□ 0.65
PTPRU-210ENST00000527027 PPP4R3BQ5MIZ7 849 aa19.13■□□□□ 0.65
PTPRU-210ENST00000527027 CXCL17Q6UXB2 119 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms