RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 THAP9Q9H5L6 903 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 KBTBD4Q9NVX7 518 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 FLT1P17948 1338 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 CTAGE15A4D2H0 777 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 RHOBTB3O94955 611 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 RHOXF2BP0C7M4 288 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 CTAGE8P0CG41 777 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 HERVK_113P62684 666 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 WDR59Q6PJI9 974 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 TMED8Q6PL24 325 aaPredicted RBP13.1□□□□□ -0.31
LINC01001-201ENST00000526704 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 CTAGE6Q86UF2 777 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 CTAGE4Q8IX94 777 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 GIMAP8Q8ND71 665 aaPredicted RBP13.1□□□□□ -0.31
LINC01001-201ENST00000526704 PLIN2Q99541 437 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 RHOXF2Q9BQY4 288 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 CCSER1Q9C0I3 900 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 ABCB6Q9NP58 842 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 CALCOCO1Q9P1Z2 691 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 BTAF1O14981 1849 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 CNTNAP4Q9C0A0 1308 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 VSNL1P62760 191 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 TUBB4BP68371 445 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 NCAPH2Q6IBW4 605 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 TTI2Q6NXR4 508 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 HEATR3Q7Z4Q2 680 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 NOA1Q8NC60 698 aaKnown RBP13.09□□□□□ -0.31
LINC01001-201ENST00000526704 CCDC148Q8NFR7 591 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 OR8K1Q8NGG5 319 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 RASSF8Q8NHQ8 419 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 SH3RF3Q8TEJ3 882 aaPredicted RBP13.09□□□□□ -0.31
LINC01001-201ENST00000526704 TRIM47Q96LD4 638 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 MYO6Q9UM54 1294 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 CAPN11Q9UMQ6 739 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 MYL1P05976 194 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 GYS2P54840 703 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 CCDC24Q8N4L8 307 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 NLRP3Q96P20 1036 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 SUGCTQ9HAC7 445 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 BARHL2Q9NY43 387 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 GUCA1BQ9UMX6 200 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 LUC7L2Q9Y383 392 aaKnown RBP13.09□□□□□ -0.31
LINC01001-201ENST00000526704 FOCADQ5VW36 1801 aa13.09□□□□□ -0.31
LINC01001-201ENST00000526704 TAF1LQ8IZX4 1826 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 SNED1Q8TER0 1413 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 PSMA7O14818 248 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 RGL2O15211 777 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 ERLIN1O75477 346 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 UBA7P41226 1012 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 GNAQP50148 359 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 HDXQ7Z353 690 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 TRAPPC11Q7Z392 1133 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 SLC51AQ86UW1 340 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 TXLNBQ8N3L3 684 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 DUSP9Q99956 384 aaKnown RBP13.08□□□□□ -0.32
LINC01001-201ENST00000526704 TTYH3Q9C0H2 523 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 NYXQ9GZU5 481 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 PDE11AQ9HCR9 933 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 SRP68Q9UHB9 627 aaKnown RBP13.08□□□□□ -0.32
LINC01001-201ENST00000526704 L1RE1Q9UN81 338 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 PSMD14O00487 310 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 LAD1O00515 517 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 ZBTB22O15209 634 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 PRPHP41219 470 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 NT5C2P49902 561 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 HNRNPH2P55795 449 aaKnown RBP13.08□□□□□ -0.32
LINC01001-201ENST00000526704 STIM1Q13586 685 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 SPTY2D1Q68D10 685 aaPredicted RBP13.08□□□□□ -0.32
LINC01001-201ENST00000526704 GALNT17Q6IS24 598 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 MSL3Q8N5Y2 521 aaKnown RBP13.08□□□□□ -0.32
LINC01001-201ENST00000526704 SLC44A5Q8NCS7 719 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 TFR2Q9UP52 801 aa13.08□□□□□ -0.32
LINC01001-201ENST00000526704 NHSQ6T4R5 1651 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 PALM3A6NDB9 673 aaPredicted RBP13.07□□□□□ -0.32
LINC01001-201ENST00000526704 B4DLN1 442 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 PES1O00541 588 aaKnown RBP13.07□□□□□ -0.32
LINC01001-201ENST00000526704 TSPY3P0CV98 308 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 TSPY8P0CW00 308 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 SRGNP10124 158 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 PLCG1P19174 1290 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 MCM6Q14566 821 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 MEA1Q16626 185 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 NBPF5PQ86XG9 351 aaPredicted RBP13.07□□□□□ -0.32
LINC01001-201ENST00000526704 HAUS4Q9H6D7 363 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 TCP11L1Q9NUJ3 509 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 RASSF10A6NK89 507 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 DNM2P50570 870 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 SEMA3FQ13275 785 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 GRIK5Q16478 980 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 BARGINQ6ZT62 677 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 NOC3LQ8WTT2 800 aaKnown RBP13.07□□□□□ -0.32
LINC01001-201ENST00000526704 TMEM47Q9BQJ4 181 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 MKNK2Q9HBH9 465 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 HDAC6Q9UBN7 1215 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 NARFQ9UHQ1 456 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 MTMR7Q9Y216 660 aa13.07□□□□□ -0.32
LINC01001-201ENST00000526704 MYH10P35580 1976 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms