RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 MCOLN1Q9GZU1 580 aa5.96□□□□□ -1.46
CD44-219ENST00000525685 ZNF552Q9H707 407 aaPredicted RBP5.96□□□□□ -1.46
CD44-219ENST00000525685 TNFRSF10DQ9UBN6 386 aa5.96□□□□□ -1.46
CD44-219ENST00000525685 FADS2P1A8MWK0 482 aa5.95□□□□□ -1.46
CD44-219ENST00000525685 PEX10O60683 326 aa5.95□□□□□ -1.46
CD44-219ENST00000525685 VAV1P15498 845 aa5.95□□□□□ -1.46
CD44-219ENST00000525685 PDE6BP35913 854 aa5.95□□□□□ -1.46
CD44-219ENST00000525685 CEBPAP49715 358 aaPredicted RBP5.95□□□□□ -1.46
CD44-219ENST00000525685 SLC14A2Q15849 920 aa5.95□□□□□ -1.46
CD44-219ENST00000525685 ANKRD39Q53RE8 183 aa5.95□□□□□ -1.46
CD44-219ENST00000525685 TDRD10Q5VZ19 366 aaKnown RBP5.95□□□□□ -1.46
CD44-219ENST00000525685 CRTC3Q6UUV7 619 aa5.95□□□□□ -1.46
CD44-219ENST00000525685 ZNF605Q86T29 641 aa5.95□□□□□ -1.46
CD44-219ENST00000525685 LRRC56Q8IYG6 542 aaPredicted RBP5.95□□□□□ -1.46
CD44-219ENST00000525685 SREK1Q8WXA9 508 aaKnown RBP5.95□□□□□ -1.46
CD44-219ENST00000525685 SMARCC1Q92922 1105 aaPredicted RBP5.95□□□□□ -1.46
CD44-219ENST00000525685 KCNN1Q92952 543 aa5.95□□□□□ -1.46
CD44-219ENST00000525685 CRTAC1Q9NQ79 661 aa5.95□□□□□ -1.46
CD44-219ENST00000525685 BICRAQ9NZM4 1560 aa5.94□□□□□ -1.46
CD44-219ENST00000525685 TCAF2A6NFQ2 919 aa5.94□□□□□ -1.46
CD44-219ENST00000525685 NPIPB6E9PJ23 425 aa5.94□□□□□ -1.46
CD44-219ENST00000525685 ENDOUP21128 410 aaKnown RBP5.94□□□□□ -1.46
CD44-219ENST00000525685 RTP1P59025 263 aa5.94□□□□□ -1.46
CD44-219ENST00000525685 AXDND1Q5T1B0 1012 aaPredicted RBP5.94□□□□□ -1.46
CD44-219ENST00000525685 DCAF15Q66K64 600 aa5.94□□□□□ -1.46
CD44-219ENST00000525685 SIRT2Q8IXJ6 389 aa5.94□□□□□ -1.46
CD44-219ENST00000525685 OR6P1Q8NGX9 317 aa5.94□□□□□ -1.46
CD44-219ENST00000525685 DRC1Q96MC2 740 aa5.94□□□□□ -1.46
CD44-219ENST00000525685 PLCD4Q9BRC7 762 aa5.94□□□□□ -1.46
CD44-219ENST00000525685 ERVK13-1Q9NX77 482 aa5.94□□□□□ -1.46
CD44-219ENST00000525685 SMG5Q9UPR3 1016 aaKnown RBP5.94□□□□□ -1.46
CD44-219ENST00000525685 GPR55Q9Y2T6 319 aaPredicted RBP5.94□□□□□ -1.46
CD44-219ENST00000525685 TEX51A0A1B0GUA7 166 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 OR14I1A6ND48 311 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 GSNP06396 782 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 ZNF445P59923 1031 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 KCNA10Q16322 511 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 HSF5Q4G112 596 aaPredicted RBP5.93□□□□□ -1.46
CD44-219ENST00000525685 FBLN7Q53RD9 439 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 RTP2Q5QGT7 225 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 LCNL1Q6ZST4 164 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 MCF2L2Q86YR7 1114 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 ZSCAN18Q8TBC5 510 aaPredicted RBP5.93□□□□□ -1.46
CD44-219ENST00000525685 DSCC1Q9BVC3 393 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 CDADC1Q9BWV3 514 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 GP6Q9HCN6 339 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 AP5S1Q9NUS5 200 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 ZNF214Q9UL59 606 aaPredicted RBP5.93□□□□□ -1.46
CD44-219ENST00000525685 LTBP3Q9NS15 1303 aa5.93□□□□□ -1.46
CD44-219ENST00000525685 H0Y8X5 98 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 SEMA7AO75326 666 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 PNLIPP16233 465 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 CD247P20963 164 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 GIPRP48546 466 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 DLG4P78352 724 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 KIR3DS1Q14943 382 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 ADGRF1Q5T601 910 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 GALNT18Q6P9A2 607 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 SLCO6A1Q86UG4 719 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 CKAP2LQ8IYA6 745 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 TMEM52Q8NDY8 209 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 GMLQ99445 158 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 SLC12A9Q9BXP2 914 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 GCM1Q9NP62 436 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 FHOD1Q9Y613 1164 aa5.92□□□□□ -1.46
CD44-219ENST00000525685 WTIPA6NIX2 430 aaPredicted RBP5.91□□□□□ -1.46
CD44-219ENST00000525685 HRKO00198 91 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 U2SURPO15042 1029 aaKnown RBP5.91□□□□□ -1.46
CD44-219ENST00000525685 CBFA2T2O43439 604 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 TP53P04637 393 aaPredicted RBP5.91□□□□□ -1.46
CD44-219ENST00000525685 FGRP09769 529 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 ETFBP38117 255 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 LINC00310P59036 64 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 TNNI3KQ59H18 835 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 NOL9Q5SY16 702 aaKnown RBP5.91□□□□□ -1.46
CD44-219ENST00000525685 SIAH1Q8IUQ4 282 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 BRF1Q92994 677 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 SHDQ96IW2 340 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 TRIM55Q9BYV6 548 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 ZNF408Q9H9D4 720 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 FAM86C1Q9NVL1 165 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 ZNF451Q9Y4E5 1061 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 SLC12A7Q9Y666 1083 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 TAF6LQ9Y6J9 622 aa5.91□□□□□ -1.46
CD44-219ENST00000525685 A0A1W2PQ45 241 aaPredicted RBP5.9□□□□□ -1.46
CD44-219ENST00000525685 A0A1W2PQY0 241 aa5.9□□□□□ -1.46
CD44-219ENST00000525685 SMAD7O15105 426 aaKnown RBP5.9□□□□□ -1.46
CD44-219ENST00000525685 ZSCAN22P10073 491 aaPredicted RBP5.9□□□□□ -1.46
CD44-219ENST00000525685 SDHBP21912 280 aa5.9□□□□□ -1.46
CD44-219ENST00000525685 ERVFRD-1P60508 538 aa5.9□□□□□ -1.46
CD44-219ENST00000525685 YBX1P67809 324 aaKnown RBP5.9□□□□□ -1.46
CD44-219ENST00000525685 LCE1DQ5T752 114 aa5.9□□□□□ -1.46
CD44-219ENST00000525685 LARP1BQ659C4 914 aaKnown RBP5.9□□□□□ -1.46
CD44-219ENST00000525685 CWF19L1Q69YN2 538 aaKnown RBP5.9□□□□□ -1.46
CD44-219ENST00000525685 TMEM132EQ6IEE7 984 aa5.9□□□□□ -1.46
CD44-219ENST00000525685 C19orf47Q8N9M1 422 aaKnown RBP5.9□□□□□ -1.46
CD44-219ENST00000525685 HIRIP3Q9BW71 556 aaPredicted RBP5.9□□□□□ -1.46
CD44-219ENST00000525685 SGPP1Q9BX95 441 aa5.9□□□□□ -1.46
CD44-219ENST00000525685 ACSL6Q9UKU0 697 aa5.9□□□□□ -1.46
CD44-219ENST00000525685 A0A087WZG4 1122 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms