RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ASCC2Q9H1I8 757 aaPredicted RBP3.16□□□□□ -1.9
CD44-212ENST00000524922 AP5S1Q9NUS5 200 aa3.16□□□□□ -1.9
CD44-212ENST00000524922 SUCOQ9UBS9 1254 aaKnown RBP3.16□□□□□ -1.9
CD44-212ENST00000524922 ZMYM5Q9UJ78 669 aa3.16□□□□□ -1.9
CD44-212ENST00000524922 HMGXB3Q12766 1538 aa3.15□□□□□ -1.9
CD44-212ENST00000524922 A0A1W2PQ45 241 aaPredicted RBP3.15□□□□□ -1.91
CD44-212ENST00000524922 A0A1W2PQY0 241 aa3.15□□□□□ -1.91
CD44-212ENST00000524922 OTOL1A6NHN0 477 aaPredicted RBP3.15□□□□□ -1.91
CD44-212ENST00000524922 FOXD2O60548 495 aaPredicted RBP3.15□□□□□ -1.91
CD44-212ENST00000524922 ZNF165P49910 485 aa3.15□□□□□ -1.91
CD44-212ENST00000524922 PMS1P54277 932 aaKnown RBP3.15□□□□□ -1.91
CD44-212ENST00000524922 FANCCQ00597 558 aa3.15□□□□□ -1.91
CD44-212ENST00000524922 LRRFIP1Q32MZ4 808 aaKnown RBP3.15□□□□□ -1.91
CD44-212ENST00000524922 ZNF385BQ569K4 471 aa3.15□□□□□ -1.91
CD44-212ENST00000524922 AXDND1Q5T1B0 1012 aaPredicted RBP3.15□□□□□ -1.91
CD44-212ENST00000524922 TCERG1LQ5VWI1 586 aa3.15□□□□□ -1.91
CD44-212ENST00000524922 DIEXFQ68CQ4 756 aaKnown RBP3.15□□□□□ -1.91
CD44-212ENST00000524922 GALNT18Q6P9A2 607 aa3.15□□□□□ -1.91
CD44-212ENST00000524922 RPTNQ6XPR3 784 aa3.15□□□□□ -1.91
CD44-212ENST00000524922 RBBP8NLQ8NC74 664 aaPredicted RBP3.15□□□□□ -1.91
CD44-212ENST00000524922 GIPC2Q8TF65 315 aa3.15□□□□□ -1.91
CD44-212ENST00000524922 GZF1Q9H116 711 aaPredicted RBP3.15□□□□□ -1.91
CD44-212ENST00000524922 IRAK3Q9Y616 596 aa3.15□□□□□ -1.91
CD44-212ENST00000524922 WTIPA6NIX2 430 aaPredicted RBP3.14□□□□□ -1.91
CD44-212ENST00000524922 H0Y8X5 98 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 MEIS1O00470 390 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 FFAR3O14843 346 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 FGF10O15520 208 aaPredicted RBP3.14□□□□□ -1.91
CD44-212ENST00000524922 CBFA2T2O43439 604 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 ZNF16P17020 682 aaPredicted RBP3.14□□□□□ -1.91
CD44-212ENST00000524922 PRKCAP17252 672 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 ZNF445P59923 1031 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 RACK1P63244 317 aaKnown RBP3.14□□□□□ -1.91
CD44-212ENST00000524922 NFKB2Q00653 900 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 CAP1Q01518 475 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 DLX2Q07687 328 aaPredicted RBP3.14□□□□□ -1.91
CD44-212ENST00000524922 SLC14A2Q15849 920 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 SKOR2Q2VWA4 1001 aaPredicted RBP3.14□□□□□ -1.91
CD44-212ENST00000524922 PLEKHN1Q494U1 663 aaPredicted RBP3.14□□□□□ -1.91
CD44-212ENST00000524922 DCAF15Q66K64 600 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 TMEM132EQ6IEE7 984 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 C7orf61Q8IZ16 206 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 SYT8Q8NBV8 401 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 NKD1Q969G9 470 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 RELTQ969Z4 430 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 SYTL4Q96C24 671 aaPredicted RBP3.14□□□□□ -1.91
CD44-212ENST00000524922 SPON2Q9BUD6 331 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 BCL2L13Q9BXK5 485 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 ZCCHC4Q9H5U6 513 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 IMPACTQ9P2X3 320 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 FBLN5Q9UBX5 448 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 JAG2Q9Y219 1238 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 PCDHB12Q9Y5F1 795 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 HCFC2Q9Y5Z7 792 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 ERCC6Q03468 1493 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 LTBP3Q9NS15 1303 aa3.14□□□□□ -1.91
CD44-212ENST00000524922 ABLIM1O14639 778 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 SRGAP3O43295 1099 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 GSNP06396 782 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 AFF3P51826 1226 aaKnown RBP3.13□□□□□ -1.91
CD44-212ENST00000524922 LAPTM5Q13571 262 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 VMACQ2NL98 169 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 VWA3BQ502W6 1294 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 ZNF394Q53GI3 561 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 TDRD10Q5VZ19 366 aaKnown RBP3.13□□□□□ -1.91
CD44-212ENST00000524922 RUFY4Q6ZNE9 571 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 TMC6Q7Z403 805 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 KIAA0825Q8IV33 1275 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 TMEM151BQ8IW70 566 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 CXorf38Q8TB03 319 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 FCRL3Q96P31 734 aaPredicted RBP3.13□□□□□ -1.91
CD44-212ENST00000524922 MCMBPQ9BTE3 642 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 CDADC1Q9BWV3 514 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 KRTAP17-1Q9BYP8 105 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 BACH2Q9BYV9 841 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 MKRN2Q9H000 416 aaKnown RBP3.13□□□□□ -1.91
CD44-212ENST00000524922 GP6Q9HCN6 339 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 SIRT5Q9NXA8 310 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 ZNF451Q9Y4E5 1061 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 TAF6LQ9Y6J9 622 aa3.13□□□□□ -1.91
CD44-212ENST00000524922 RFXAPO00287 272 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 PLA2G1BP04054 148 aaKnown RBP3.12□□□□□ -1.91
CD44-212ENST00000524922 MPOP05164 745 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 DBHP09172 617 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 ATF2P15336 505 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 CD247P20963 164 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 ENDOUP21128 410 aaKnown RBP3.12□□□□□ -1.91
CD44-212ENST00000524922 MCM4P33991 863 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 MAPKAPK2P49137 400 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 NCKAP1LP55160 1127 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 HTRA3P83110 453 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 CYP4F8P98187 520 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 RAB3GAP1Q15042 981 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 CNKSR3Q6P9H4 555 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 UNC5AQ6ZN44 842 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 LSRQ86X29 649 aaPredicted RBP3.12□□□□□ -1.91
CD44-212ENST00000524922 ZNF513Q8N8E2 541 aaPredicted RBP3.12□□□□□ -1.91
CD44-212ENST00000524922 LINC01356Q8N9X3 169 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 NUP43Q8NFH3 380 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 NLGN2Q8NFZ4 835 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms