RNA–Protein interactions for RNA: ENST00000523916.5

CASP3-206, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-206ENST00000523916 MPP4Q96JB8 637 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 PCDH18Q9HCL0 1135 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 RNF181Q9P0P0 153 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 MYO1AQ9UBC5 1043 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 PAIP2BQ9ULR5 123 aaKnown RBP11.55□□□□□ -0.56
CASP3-206ENST00000523916 GMEB1Q9Y692 573 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 TADA3O75528 432 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 GFPT2O94808 682 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 SLC8A1P32418 973 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 RASSF7Q02833 373 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 TWISTNBQ3B726 338 aaPredicted RBP11.55□□□□□ -0.56
CASP3-206ENST00000523916 AGAP9Q5VTM2 703 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 C14orf80Q86SX3 495 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 DHTKD1Q96HY7 919 aaPredicted RBP11.55□□□□□ -0.56
CASP3-206ENST00000523916 CRAMP1Q96RY5 1269 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 PDE11AQ9HCR9 933 aa11.55□□□□□ -0.56
CASP3-206ENST00000523916 ZNF521Q96K83 1311 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 SNED1Q8TER0 1413 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 LINGO3P0C6S8 592 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 MATR3P43243 847 aaKnown RBP eCLIP11.54□□□□□ -0.56
CASP3-206ENST00000523916 PRELPP51888 382 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 CBX3Q13185 183 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 THOC7Q6I9Y2 204 aaKnown RBP11.54□□□□□ -0.56
CASP3-206ENST00000523916 NCCRP1Q6ZVX7 275 aaPredicted RBP11.54□□□□□ -0.56
CASP3-206ENST00000523916 ZBTB8BQ8NAP8 495 aaPredicted RBP11.54□□□□□ -0.56
CASP3-206ENST00000523916 SMARCC2Q8TAQ2 1214 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 UBE2OQ9C0C9 1292 aaKnown RBP11.54□□□□□ -0.56
CASP3-206ENST00000523916 KCND1Q9NSA2 647 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 COMMD8Q9NX08 183 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 PRELID1Q9Y255 219 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 TMEM110-MUSTN1A8MSY1 372 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 CCT5P48643 541 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 PABPC1LQ4VXU2 614 aaKnown RBP11.54□□□□□ -0.56
CASP3-206ENST00000523916 CCDC183Q5T5S1 534 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 LRRC49Q8IUZ0 686 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.54□□□□□ -0.56
CASP3-206ENST00000523916 NLRP3Q96P20 1036 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 SPAG5Q96R06 1193 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 PHAXQ9H814 394 aaKnown RBP11.54□□□□□ -0.56
CASP3-206ENST00000523916 GALNT8Q9NY28 637 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 ZDHHC9Q9Y397 364 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 TMED5Q9Y3A6 229 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 ATP6V0A2Q9Y487 856 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 SH3TC1Q8TE82 1336 aa11.54□□□□□ -0.56
CASP3-206ENST00000523916 EFCAB8A8MWE9 144 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 DDX58O95786 925 aaKnown RBP11.53□□□□□ -0.56
CASP3-206ENST00000523916 MCM3P25205 808 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 PSMD7P51665 324 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 OXCT1P55809 520 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 ARPC4P59998 168 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 ALDH1L2Q3SY69 923 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 KANK3Q6NY19 840 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 FAM200AQ8TCP9 573 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 RPGRQ92834 1020 aaKnown RBP11.53□□□□□ -0.56
CASP3-206ENST00000523916 LUC7LQ9NQ29 371 aaKnown RBP11.53□□□□□ -0.56
CASP3-206ENST00000523916 TIMM22Q9Y584 194 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 P4HA2O15460 535 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 ATICP31939 592 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 PLCB4Q15147 1175 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 COBLL1Q53SF7 1204 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 FAM117BQ6P1L5 589 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 PLPP6Q8IY26 295 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
CASP3-206ENST00000523916 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 CACTINQ8WUQ7 758 aaKnown RBP11.53□□□□□ -0.56
CASP3-206ENST00000523916 VTI1AQ96AJ9 217 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 TAOK3Q9H2K8 898 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 C6orf203Q9P0P8 240 aaPredicted RBP11.53□□□□□ -0.56
CASP3-206ENST00000523916 TRMT112Q9UI30 125 aaKnown RBP11.53□□□□□ -0.56
CASP3-206ENST00000523916 TPCN1Q9ULQ1 816 aa11.53□□□□□ -0.56
CASP3-206ENST00000523916 RPAP1Q9BWH6 1393 aaPredicted RBP11.52□□□□□ -0.56
CASP3-206ENST00000523916 CCDC159P0C7I6 412 aa11.52□□□□□ -0.56
CASP3-206ENST00000523916 FUT4P22083 530 aa11.52□□□□□ -0.56
CASP3-206ENST00000523916 CSE1LP55060 971 aaKnown RBP11.52□□□□□ -0.56
CASP3-206ENST00000523916 DYNC1I2Q13409 638 aaKnown RBP11.52□□□□□ -0.56
CASP3-206ENST00000523916 LONRF2Q1L5Z9 754 aa11.52□□□□□ -0.56
CASP3-206ENST00000523916 RIC3Q7Z5B4 369 aa11.52□□□□□ -0.56
CASP3-206ENST00000523916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.52□□□□□ -0.56
CASP3-206ENST00000523916 LCA5Q86VQ0 697 aa11.52□□□□□ -0.56
CASP3-206ENST00000523916 RTKN2Q8IZC4 609 aa11.52□□□□□ -0.56
CASP3-206ENST00000523916 KLHL42Q9P2K6 505 aa11.52□□□□□ -0.56
CASP3-206ENST00000523916 ITGB1BP2Q9UKP3 347 aa11.52□□□□□ -0.56
CASP3-206ENST00000523916 ZSCAN12O43309 604 aa11.52□□□□□ -0.57
CASP3-206ENST00000523916 LDHAP00338 332 aaKnown RBP11.52□□□□□ -0.57
CASP3-206ENST00000523916 GNAQP50148 359 aa11.52□□□□□ -0.57
CASP3-206ENST00000523916 C1QTNF8P60827 252 aa11.52□□□□□ -0.57
CASP3-206ENST00000523916 MAP7D1Q3KQU3 841 aa11.52□□□□□ -0.57
CASP3-206ENST00000523916 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
CASP3-206ENST00000523916 FAM228AQ86W67 206 aa11.52□□□□□ -0.57
CASP3-206ENST00000523916 GPR161Q8N6U8 529 aaKnown RBP11.52□□□□□ -0.57
CASP3-206ENST00000523916 SREK1Q8WXA9 508 aaKnown RBP11.52□□□□□ -0.57
CASP3-206ENST00000523916 VMP1Q96GC9 406 aa11.52□□□□□ -0.57
CASP3-206ENST00000523916 USP26Q9BXU7 913 aa11.52□□□□□ -0.57
CASP3-206ENST00000523916 MAP3K20Q9NYL2 800 aaKnown RBP11.52□□□□□ -0.57
CASP3-206ENST00000523916 VAMP4O75379 141 aa11.51□□□□□ -0.57
CASP3-206ENST00000523916 PENKP01210 267 aaPredicted RBP11.51□□□□□ -0.57
CASP3-206ENST00000523916 TCF7P36402 384 aaPredicted RBP11.51□□□□□ -0.57
CASP3-206ENST00000523916 FKBP4Q02790 459 aaKnown RBP eCLIP11.51□□□□□ -0.57
CASP3-206ENST00000523916 ARHGEF6Q15052 776 aa11.51□□□□□ -0.57
CASP3-206ENST00000523916 PPP1R15BQ5SWA1 713 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms