RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 SYTL4Q96C24 671 aaPredicted RBP8.49□□□□□ -1.05
CPNE3-207ENST00000523588 HHIPL1Q96JK4 782 aa8.49□□□□□ -1.05
CPNE3-207ENST00000523588 FCRL2Q96LA5 508 aaPredicted RBP8.49□□□□□ -1.05
CPNE3-207ENST00000523588 CDADC1Q9BWV3 514 aa8.49□□□□□ -1.05
CPNE3-207ENST00000523588 EPN3Q9H201 632 aa8.49□□□□□ -1.05
CPNE3-207ENST00000523588 NOTOA8MTQ0 251 aa8.48□□□□□ -1.05
CPNE3-207ENST00000523588 ITGAVP06756 1048 aa8.48□□□□□ -1.05
CPNE3-207ENST00000523588 JUNBP17275 347 aaPredicted RBP8.48□□□□□ -1.05
CPNE3-207ENST00000523588 AFMP43652 599 aa8.48□□□□□ -1.05
CPNE3-207ENST00000523588 AMPD2Q01433 879 aa8.48□□□□□ -1.05
CPNE3-207ENST00000523588 NR0B2Q15466 257 aa8.48□□□□□ -1.05
CPNE3-207ENST00000523588 DPY19L1Q2PZI1 675 aa8.48□□□□□ -1.05
CPNE3-207ENST00000523588 MCTP1Q6DN14 999 aa8.48□□□□□ -1.05
CPNE3-207ENST00000523588 TRIM59Q8IWR1 403 aa8.48□□□□□ -1.05
CPNE3-207ENST00000523588 SIRPGQ9P1W8 387 aa8.48□□□□□ -1.05
CPNE3-207ENST00000523588 FADS2P1A8MWK0 482 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 BIN1O00499 593 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 AURKAO14965 403 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 U2SURPO15042 1029 aaKnown RBP8.47□□□□□ -1.05
CPNE3-207ENST00000523588 FGF10O15520 208 aaPredicted RBP8.47□□□□□ -1.05
CPNE3-207ENST00000523588 TBX1O43435 398 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 KCNH1O95259 989 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 CAPNS1P04632 268 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 TRHRP34981 398 aaPredicted RBP8.47□□□□□ -1.05
CPNE3-207ENST00000523588 KIR2DL1P43626 348 aaPredicted RBP8.47□□□□□ -1.05
CPNE3-207ENST00000523588 KIR2DL2P43627 348 aaPredicted RBP8.47□□□□□ -1.05
CPNE3-207ENST00000523588 TIGD5Q53EQ6 642 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 POMZP3Q6PJE2 187 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 ZNF227Q86WZ6 799 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 OXR1Q8N573 874 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 ANKS4BQ8N8V4 417 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 PPP1R14AQ96A00 147 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 DNAJC2Q99543 621 aaKnown RBP8.47□□□□□ -1.05
CPNE3-207ENST00000523588 CCDC113Q9H0I3 377 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 TNFRSF10DQ9UBN6 386 aa8.47□□□□□ -1.05
CPNE3-207ENST00000523588 CARMIL2Q6F5E8 1435 aa8.46□□□□□ -1.05
CPNE3-207ENST00000523588 FITM1A5D6W6 292 aa8.46□□□□□ -1.06
CPNE3-207ENST00000523588 NOP56O00567 594 aaKnown RBP8.46□□□□□ -1.06
CPNE3-207ENST00000523588 USP2O75604 605 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-207ENST00000523588 EFEMP2O95967 443 aa8.46□□□□□ -1.06
CPNE3-207ENST00000523588 CHRNEQ04844 493 aa8.46□□□□□ -1.06
CPNE3-207ENST00000523588 SOGA3Q5TF21 947 aa8.46□□□□□ -1.06
CPNE3-207ENST00000523588 RCSD1Q6JBY9 416 aa8.46□□□□□ -1.06
CPNE3-207ENST00000523588 SPPL2CQ8IUH8 684 aa8.46□□□□□ -1.06
CPNE3-207ENST00000523588 ST13P5Q8NFI4 369 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-207ENST00000523588 MYLIPQ8WY64 445 aa8.46□□□□□ -1.06
CPNE3-207ENST00000523588 KRTAP4-8Q9BYQ9 185 aa8.46□□□□□ -1.06
CPNE3-207ENST00000523588 C19orf44Q9H6X5 657 aa8.46□□□□□ -1.06
CPNE3-207ENST00000523588 GPR55Q9Y2T6 319 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-207ENST00000523588 STXBP3O00186 592 aa8.45□□□□□ -1.06
CPNE3-207ENST00000523588 RAC2P15153 192 aa8.45□□□□□ -1.06
CPNE3-207ENST00000523588 CYP4F3Q08477 520 aa8.45□□□□□ -1.06
CPNE3-207ENST00000523588 GTF2IRD2BQ6EKJ0 949 aa8.45□□□□□ -1.06
CPNE3-207ENST00000523588 GTF2IRD2Q86UP8 949 aa8.45□□□□□ -1.06
CPNE3-207ENST00000523588 CRACR2BQ8N4Y2 399 aaPredicted RBP8.45□□□□□ -1.06
CPNE3-207ENST00000523588 PMFBP1Q8TBY8 1022 aa8.45□□□□□ -1.06
CPNE3-207ENST00000523588 KIRREL1Q96J84 757 aa8.45□□□□□ -1.06
CPNE3-207ENST00000523588 C2orf71A6NGG8 1288 aa8.44□□□□□ -1.06
CPNE3-207ENST00000523588 PDPK1O15530 556 aa8.44□□□□□ -1.06
CPNE3-207ENST00000523588 RASGRF1Q13972 1273 aa8.44□□□□□ -1.06
CPNE3-207ENST00000523588 SLCO6A1Q86UG4 719 aa8.44□□□□□ -1.06
CPNE3-207ENST00000523588 ZSWIM9Q86XI8 627 aa8.44□□□□□ -1.06
CPNE3-207ENST00000523588 ABHD4Q8TB40 342 aa8.44□□□□□ -1.06
CPNE3-207ENST00000523588 UBXN4Q92575 508 aa8.44□□□□□ -1.06
CPNE3-207ENST00000523588 PTCHD1Q96NR3 888 aa8.44□□□□□ -1.06
CPNE3-207ENST00000523588 NKX2-4Q9H2Z4 354 aa8.44□□□□□ -1.06
CPNE3-207ENST00000523588 LRP2BPQ9P2M1 347 aa8.44□□□□□ -1.06
CPNE3-207ENST00000523588 BACE2Q9Y5Z0 518 aa8.44□□□□□ -1.06
CPNE3-207ENST00000523588 A0A1W2PQU0 124 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 NRDCO43847 1150 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 PSPNO60542 156 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 RASA3Q14644 834 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 EEF1DP3Q658K8 133 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 CEP128Q6ZU80 1094 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 LILRA2Q8N149 483 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 BTN2A2Q8WVV5 523 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 FAM168AQ92567 244 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 COPS5Q92905 334 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 SHISA4Q96DD7 197 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 CYP26B1Q9NR63 512 aa8.43□□□□□ -1.06
CPNE3-207ENST00000523588 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
CPNE3-207ENST00000523588 FAM221BA6H8Z2 402 aa8.42□□□□□ -1.06
CPNE3-207ENST00000523588 CCDC85CA6NKD9 419 aa8.42□□□□□ -1.06
CPNE3-207ENST00000523588 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.42□□□□□ -1.06
CPNE3-207ENST00000523588 RTP1P59025 263 aa8.42□□□□□ -1.06
CPNE3-207ENST00000523588 MKL1Q969V6 931 aa8.42□□□□□ -1.06
CPNE3-207ENST00000523588 ZNF669Q96BR6 464 aaPredicted RBP8.42□□□□□ -1.06
CPNE3-207ENST00000523588 SGSM3Q96HU1 749 aa8.42□□□□□ -1.06
CPNE3-207ENST00000523588 RNF32Q9H0A6 362 aa8.42□□□□□ -1.06
CPNE3-207ENST00000523588 A0A1W2PQ45 241 aaPredicted RBP8.41□□□□□ -1.06
CPNE3-207ENST00000523588 A0A1W2PQY0 241 aa8.41□□□□□ -1.06
CPNE3-207ENST00000523588 ZNF503-AS2A6NEH8 195 aa8.41□□□□□ -1.06
CPNE3-207ENST00000523588 GRIA2P42262 883 aa8.41□□□□□ -1.06
CPNE3-207ENST00000523588 SEPHS1P49903 392 aa8.41□□□□□ -1.06
CPNE3-207ENST00000523588 PPP2R2AP63151 447 aa8.41□□□□□ -1.06
CPNE3-207ENST00000523588 SCRN1Q12765 414 aa8.41□□□□□ -1.06
CPNE3-207ENST00000523588 SF1Q15637 639 aaKnown RBP8.41□□□□□ -1.06
CPNE3-207ENST00000523588 KCNMB1Q16558 191 aa8.41□□□□□ -1.06
CPNE3-207ENST00000523588 HSF5Q4G112 596 aaPredicted RBP8.41□□□□□ -1.06
CPNE3-207ENST00000523588 CYP2R1Q6VVX0 501 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms