RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-225ENST00000523288 SETDB2Q96T68 719 aa4.28□□□□□ -1.72
FAM49B-225ENST00000523288 MTRQ99707 1265 aa4.28□□□□□ -1.72
FAM49B-225ENST00000523288 MRPL46Q9H2W6 279 aaKnown RBP4.28□□□□□ -1.72
FAM49B-225ENST00000523288 PHRF1Q9P1Y6 1649 aaKnown RBP4.28□□□□□ -1.72
FAM49B-225ENST00000523288 PLEKHG1Q9ULL1 1385 aa4.28□□□□□ -1.72
FAM49B-225ENST00000523288 AGLP35573 1532 aa4.28□□□□□ -1.72
FAM49B-225ENST00000523288 A0A1W2PQ27 194 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 A0A1W2PQ64 194 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 A0A1W2PQD8 194 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 VPS37CA5D8V6 355 aaPredicted RBP4.28□□□□□ -1.73
FAM49B-225ENST00000523288 URI1O94763 535 aaPredicted RBP4.28□□□□□ -1.73
FAM49B-225ENST00000523288 POLR3DP05423 398 aaPredicted RBP4.28□□□□□ -1.73
FAM49B-225ENST00000523288 IFIT1P09914 478 aaKnown RBP4.28□□□□□ -1.73
FAM49B-225ENST00000523288 GNAT1P11488 350 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 CTAG1AP78358 180 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 AMPD2Q01433 879 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 IQCEQ6IPM2 695 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 CCDC65Q8IXS2 484 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 CCDC155Q8N6L0 562 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 TSR2Q969E8 191 aaKnown RBP4.28□□□□□ -1.73
FAM49B-225ENST00000523288 VTI1AQ96AJ9 217 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 ZNF653Q96CK0 615 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 CORO1BQ9BR76 489 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 TRIM4Q9C037 500 aa4.28□□□□□ -1.73
FAM49B-225ENST00000523288 RIMS2Q9UQ26 1411 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 RGL2O15211 777 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 FCHSD2O94868 740 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 LMOD1P29536 600 aaPredicted RBP4.27□□□□□ -1.73
FAM49B-225ENST00000523288 NEK4P51957 841 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 CKAP4Q07065 602 aaKnown RBP4.27□□□□□ -1.73
FAM49B-225ENST00000523288 ODF2Q5BJF6 829 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 CCDC181Q5TID7 509 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 CCDC121Q6ZUS5 278 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 MMGT1Q8N4V1 131 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 BCAS4Q8TDM0 211 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 GIMAP1Q8WWP7 306 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 SSH1Q8WYL5 1049 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 OPTNQ96CV9 577 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 CDK5RAP3Q96JB5 506 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 VCX3BQ9H321 246 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 EPB41L1Q9H4G0 881 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 VCX3AQ9NNX9 186 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 BTG4Q9NY30 223 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 IL20Q9NYY1 176 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 TTF2Q9UNY4 1162 aaKnown RBP4.27□□□□□ -1.73
FAM49B-225ENST00000523288 SLC30A1Q9Y6M5 507 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 BCL9LQ86UU0 1499 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 CTAGE15A4D2H0 777 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 E7EVH7 732 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 TPD52L2O43399 206 aaKnown RBP4.27□□□□□ -1.73
FAM49B-225ENST00000523288 APBA3O96018 575 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 CTAGE8P0CG41 777 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 TROVE2P10155 538 aaKnown RBP eCLIP4.27□□□□□ -1.73
FAM49B-225ENST00000523288 CALB2P22676 271 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 NLRP12P59046 1061 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 GNGT1P63211 74 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 MCM10Q7L590 875 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 CTAGE6Q86UF2 777 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 NLRP14Q86W24 1093 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 CTAGE4Q8IX94 777 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 PDILTQ8N807 584 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 ANKK1Q8NFD2 765 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 ENGASEQ8NFI3 743 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 TIPINQ9BVW5 301 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 YIPF2Q9BWQ6 316 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 RTFDC1Q9BY42 306 aaPredicted RBP4.27□□□□□ -1.73
FAM49B-225ENST00000523288 OXCT2Q9BYC2 517 aaPredicted RBP4.27□□□□□ -1.73
FAM49B-225ENST00000523288 MIS12Q9H081 205 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 ZHX3Q9H4I2 956 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 USP21Q9UK80 565 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 TPCN1Q9ULQ1 816 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 LRRD1A4D1F6 860 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 BECN2A8MW95 431 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 ATP9BO43861 1147 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 USO1O60763 962 aaKnown RBP4.27□□□□□ -1.73
FAM49B-225ENST00000523288 GNAI2P04899 355 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 CYP11B2P19099 503 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 ZNF76P36508 570 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 SCTRP47872 440 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 HDLBPQ00341 1268 aaKnown RBP4.27□□□□□ -1.73
FAM49B-225ENST00000523288 SEPT6Q14141 434 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 SPDYAQ5MJ70 313 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 C11orf57Q6ZUT1 292 aaPredicted RBP4.27□□□□□ -1.73
FAM49B-225ENST00000523288 CNTROBQ8N137 903 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 MYD88Q99836 296 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 COMMD3-BMI1R4GMX3 469 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 NALCNQ8IZF0 1738 aa4.27□□□□□ -1.73
FAM49B-225ENST00000523288 FAM237AA0A1B0GTK4 181 aa4.26□□□□□ -1.73
FAM49B-225ENST00000523288 PDHBP11177 359 aa4.26□□□□□ -1.73
FAM49B-225ENST00000523288 RPL17P18621 184 aaKnown RBP4.26□□□□□ -1.73
FAM49B-225ENST00000523288 GNAZP19086 355 aa4.26□□□□□ -1.73
FAM49B-225ENST00000523288 COPB2P35606 906 aa4.26□□□□□ -1.73
FAM49B-225ENST00000523288 PPM1FP49593 454 aaPredicted RBP4.26□□□□□ -1.73
FAM49B-225ENST00000523288 TUBA4AP68366 448 aa4.26□□□□□ -1.73
FAM49B-225ENST00000523288 FAM98CQ17RN3 349 aaKnown RBP4.26□□□□□ -1.73
FAM49B-225ENST00000523288 TBC1D9BQ66K14 1250 aa4.26□□□□□ -1.73
FAM49B-225ENST00000523288 EMBQ6PCB8 327 aa4.26□□□□□ -1.73
FAM49B-225ENST00000523288 ITIH6Q6UXX5 1313 aa4.26□□□□□ -1.73
FAM49B-225ENST00000523288 RASGRP2Q7LDG7 609 aa4.26□□□□□ -1.73
FAM49B-225ENST00000523288 TTC6Q86TZ1 520 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms