RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 UBE2SQ16763 222 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SKOR2Q2VWA4 1001 aaPredicted RBP17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 CCDC174Q6PII3 467 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ZC3H15Q8WU90 426 aaKnown RBP17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 KIAA1683Q9H0B3 1180 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ZNF408Q9H9D4 720 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SYNPO2Q9UMS6 1093 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SPTLC2O15270 562 aa17.27■□□□□ 0.36
CSGALNACT1-211ENST00000522854 VCAM1P19320 739 aa17.27■□□□□ 0.36
CSGALNACT1-211ENST00000522854 CALML3P27482 149 aa17.27■□□□□ 0.36
CSGALNACT1-211ENST00000522854 TTLL12Q14166 644 aaPredicted RBP17.27■□□□□ 0.36
CSGALNACT1-211ENST00000522854 CSPP1Q1MSJ5 1256 aa17.27■□□□□ 0.36
CSGALNACT1-211ENST00000522854 JAKMIP3Q5VZ66 844 aa17.27■□□□□ 0.36
CSGALNACT1-211ENST00000522854 BTNL9Q6UXG8 535 aa17.27■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ZNF280CQ8ND82 737 aa17.27■□□□□ 0.36
CSGALNACT1-211ENST00000522854 NMRK2Q9NPI5 230 aa17.27■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PCDHA1Q9Y5I3 950 aa17.27■□□□□ 0.36
CSGALNACT1-211ENST00000522854 BACE1P56817 501 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 ZNF174Q15697 407 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 INF2Q27J81 1249 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 PNMA8AQ86V59 439 aaPredicted RBP17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 CLIC6Q96NY7 704 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 TANGO6Q9C0B7 1094 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 GOLGA6L4A6NEF3 574 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 PPP1R12BO60237 982 aaPredicted RBP17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 GRIN1Q05586 938 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 RILPL1Q5EBL4 403 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 ATL3Q6DD88 541 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 BICD2Q8TD16 824 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 GOLPH3LQ9H4A5 285 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 ELP3Q9H9T3 547 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 C6orf50Q9HD87 102 aa17.26■□□□□ 0.35
CSGALNACT1-211ENST00000522854 USP17L15C9J2P7 530 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 USP17L13C9JLJ4 530 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 USP17L11C9JVI0 530 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 USP17L18D6R9N7 530 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 USP17L22D6RA61 530 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 USP17L17D6RBQ6 530 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 USP17L19D6RCP7 530 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 USP17L20D6RJB6 530 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 YEATS4O95619 227 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 USP17L24Q0WX57 530 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 SLC39A14Q15043 492 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 DAGLBQ8NCG7 672 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 WNK4Q96J92 1243 aa17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 RPAP3Q9H6T3 665 aaPredicted RBP17.25■□□□□ 0.35
CSGALNACT1-211ENST00000522854 MBD3O95983 291 aa17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 ADCY7P51828 1080 aa17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 SPECC1Q5M775 1068 aa17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 NOL9Q5SY16 702 aaKnown RBP17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 CCDC12Q8WUD4 166 aaPredicted RBP17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 WDR18Q9BV38 432 aa17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 AFG3L2Q9Y4W6 797 aa17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 CCDC194A0A1B0GVG4 234 aa17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 MCM7P33993 719 aa17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 FBXO11Q86XK2 927 aa17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 REXO1Q8N1G1 1221 aaKnown RBP17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 GINM1Q9NU53 330 aa17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 PTPRFP10586 1907 aa17.24■□□□□ 0.35
CSGALNACT1-211ENST00000522854 WDR46O15213 610 aaKnown RBP17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 NR1I2O75469 434 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 FLOT1O75955 427 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 GNA11P29992 359 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 TTC38Q5R3I4 469 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 AXDND1Q5T1B0 1012 aaPredicted RBP17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 CCAR1Q8IX12 1150 aaKnown RBP17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 KCNG4Q8TDN1 519 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 LPAR1Q92633 364 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 OTUD5Q96G74 571 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 P2RX7Q99572 595 aaKnown RBP17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 AMNQ9BXJ7 453 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 AS3MTQ9HBK9 375 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 FEM1BQ9UK73 627 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 CSADQ9Y600 493 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 PARP14Q460N5 1801 aa17.23■□□□□ 0.35
CSGALNACT1-211ENST00000522854 A0A1B0GVL5 298 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 OPLAHO14841 1288 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 IREB2P48200 963 aaKnown RBP17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 ZSCAN23Q3MJ62 389 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 CHURC1Q8WUH1 139 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 PSTPIP2Q9H939 334 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 RIC8AQ9NPQ8 531 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 ESYT2A0FGR8 921 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 hCG_1984214I3L0E3 225 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 NF2P35240 595 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 GALNT17Q6IS24 598 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 ZNF713Q8N859 430 aaPredicted RBP17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 TBC1D5Q92609 795 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 AGBL1Q96MI9 1066 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 SLF1Q9BQI6 1058 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 RANBP17Q9H2T7 1088 aaKnown RBP17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 DACT1Q9NYF0 836 aa17.22■□□□□ 0.35
CSGALNACT1-211ENST00000522854 IRF6O14896 467 aa17.21■□□□□ 0.35
CSGALNACT1-211ENST00000522854 HOXA13P31271 388 aaPredicted RBP17.21■□□□□ 0.35
CSGALNACT1-211ENST00000522854 CAMK4Q16566 473 aa17.21■□□□□ 0.35
CSGALNACT1-211ENST00000522854 CPXCR1Q8N123 301 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms